RNA–Protein interactions for RNA: ENST00000487002.1

FDPS-212, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 2,017 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-212ENST00000487002 TM4SF1P30408 202 aa19.5■□□□□ 0.71
FDPS-212ENST00000487002 GTF2F1P35269 517 aaKnown RBP eCLIP19.5■□□□□ 0.716e-8■■■□□ 18.2
FDPS-212ENST00000487002 DHX8Q14562 1220 aaKnown RBP19.5■□□□□ 0.71
FDPS-212ENST00000487002 SBK1Q52WX2 424 aa19.5■□□□□ 0.71
FDPS-212ENST00000487002 STK11IPQ8N1F8 1099 aa19.5■□□□□ 0.71
FDPS-212ENST00000487002 KCNJ14Q9UNX9 436 aa19.5■□□□□ 0.71
FDPS-212ENST00000487002 PTPREP23469 700 aa19.49■□□□□ 0.71
FDPS-212ENST00000487002 FUT2Q10981 343 aa19.49■□□□□ 0.71
FDPS-212ENST00000487002 LRMPQ12912 555 aa19.49■□□□□ 0.71
FDPS-212ENST00000487002 KRBA2Q6ZNG9 492 aa19.49■□□□□ 0.71
FDPS-212ENST00000487002 CACTINQ8WUQ7 758 aaKnown RBP19.49■□□□□ 0.71
FDPS-212ENST00000487002 ARHGEF1Q92888 912 aaKnown RBP19.49■□□□□ 0.71
FDPS-212ENST00000487002 IMPACTQ9P2X3 320 aa19.49■□□□□ 0.71
FDPS-212ENST00000487002 HOOK1Q9UJC3 728 aaKnown RBP19.49■□□□□ 0.71
FDPS-212ENST00000487002 KCNH3Q9ULD8 1083 aa19.49■□□□□ 0.71
FDPS-212ENST00000487002 GSDMDP57764 484 aa19.49■□□□□ 0.71
FDPS-212ENST00000487002 CHAF1AQ13111 956 aaPredicted RBP19.49■□□□□ 0.71
FDPS-212ENST00000487002 LRRC8AQ8IWT6 810 aa19.49■□□□□ 0.71
FDPS-212ENST00000487002 DCP1AQ9NPI6 582 aaPredicted RBP19.49■□□□□ 0.71
FDPS-212ENST00000487002 FAM13BQ9NYF5 915 aa19.49■□□□□ 0.71
FDPS-212ENST00000487002 FBXO2Q9UK22 296 aaPredicted RBP19.49■□□□□ 0.71
FDPS-212ENST00000487002 USP21Q9UK80 565 aa19.49■□□□□ 0.71
FDPS-212ENST00000487002 USP17L12C9JPN9 530 aa19.48■□□□□ 0.71
FDPS-212ENST00000487002 USP17L21D6R901 530 aa19.48■□□□□ 0.71
FDPS-212ENST00000487002 MYO1BO43795 1136 aa19.48■□□□□ 0.71
FDPS-212ENST00000487002 TROAPQ12815 778 aa19.48■□□□□ 0.71
FDPS-212ENST00000487002 CLIC6Q96NY7 704 aa19.48■□□□□ 0.71
FDPS-212ENST00000487002 CYP2D7A0A087X1C5 515 aa19.47■□□□□ 0.71
FDPS-212ENST00000487002 SMIM5Q71RC9 77 aa19.47■□□□□ 0.71
FDPS-212ENST00000487002 OSBPL5Q9H0X9 879 aaPredicted RBP19.47■□□□□ 0.71
FDPS-212ENST00000487002 TFCP2L1Q9NZI6 479 aa19.47■□□□□ 0.71
FDPS-212ENST00000487002 NCAPHQ15003 741 aa19.47■□□□□ 0.71
FDPS-212ENST00000487002 CNNM3Q8NE01 707 aa19.47■□□□□ 0.71
FDPS-212ENST00000487002 PHF20Q9BVI0 1012 aa19.47■□□□□ 0.71
FDPS-212ENST00000487002 AATFQ9NY61 560 aaKnown RBP eCLIP19.47■□□□□ 0.71
FDPS-212ENST00000487002 LEMD3Q9Y2U8 911 aa19.47■□□□□ 0.71
FDPS-212ENST00000487002 UBAP1LF5GYI3 381 aa19.46■□□□□ 0.71
FDPS-212ENST00000487002 BIN1O00499 593 aa19.46■□□□□ 0.71
FDPS-212ENST00000487002 PRDX5P30044 214 aa19.46■□□□□ 0.71
FDPS-212ENST00000487002 PKN1Q16512 942 aa19.46■□□□□ 0.71
FDPS-212ENST00000487002 TMTC3Q6ZXV5 915 aa19.46■□□□□ 0.71
FDPS-212ENST00000487002 METTL16Q86W50 562 aaKnown RBP19.46■□□□□ 0.71
FDPS-212ENST00000487002 CMTR1Q8N1G2 835 aaKnown RBP19.46■□□□□ 0.71
FDPS-212ENST00000487002 CCDC82Q8N4S0 544 aa19.46■□□□□ 0.71
FDPS-212ENST00000487002 FBXW7Q969H0 707 aa19.46■□□□□ 0.71
FDPS-212ENST00000487002 TAOK2Q9UL54 1235 aa19.46■□□□□ 0.71
FDPS-212ENST00000487002 SRPRBQ9Y5M8 271 aaKnown RBP19.46■□□□□ 0.71
FDPS-212ENST00000487002 NAV1Q8NEY1 1877 aa19.46■□□□□ 0.71
FDPS-212ENST00000487002 SMIM22K7EJ46 135 aa19.46■□□□□ 0.71
FDPS-212ENST00000487002 BMP15O95972 392 aa19.46■□□□□ 0.71
FDPS-212ENST00000487002 KRT2P35908 639 aa19.46■□□□□ 0.71
FDPS-212ENST00000487002 PDE4BQ07343 736 aa19.46■□□□□ 0.71
FDPS-212ENST00000487002 NR5A1Q13285 461 aa19.46■□□□□ 0.71
FDPS-212ENST00000487002 GRAPQ13588 217 aa19.46■□□□□ 0.71
FDPS-212ENST00000487002 GRAPLQ8TC17 118 aaPredicted RBP19.46■□□□□ 0.71
FDPS-212ENST00000487002 BRMS1Q9HCU9 246 aa19.46■□□□□ 0.71
FDPS-212ENST00000487002 ADRA2BP18089 450 aa19.45■□□□□ 0.7
FDPS-212ENST00000487002 RFC4P35249 363 aa19.45■□□□□ 0.7
FDPS-212ENST00000487002 LONRF3Q496Y0 759 aa19.45■□□□□ 0.7
FDPS-212ENST00000487002 WDR66Q8TBY9 1149 aa19.45■□□□□ 0.7
FDPS-212ENST00000487002 PRDM1O75626 825 aa19.44■□□□□ 0.7
FDPS-212ENST00000487002 PNOCQ13519 176 aa19.44■□□□□ 0.7
FDPS-212ENST00000487002 HSP90AA2PQ14568 343 aaPredicted RBP19.44■□□□□ 0.7
FDPS-212ENST00000487002 TRAPPC3LQ5T215 181 aa19.44■□□□□ 0.7
FDPS-212ENST00000487002 C15orf52Q6ZUT6 534 aaKnown RBP19.44■□□□□ 0.7
FDPS-212ENST00000487002 DZIP1Q86YF9 867 aaKnown RBP19.44■□□□□ 0.7
FDPS-212ENST00000487002 OXER1Q8TDS5 423 aa19.44■□□□□ 0.7
FDPS-212ENST00000487002 MAP7D2Q96T17 732 aa19.44■□□□□ 0.7
FDPS-212ENST00000487002 PCDHB6Q9Y5E3 794 aa19.44■□□□□ 0.7
FDPS-212ENST00000487002 CNTNAP5Q8WYK1 1306 aa19.44■□□□□ 0.7
FDPS-212ENST00000487002 UBR3Q6ZT12 1888 aa19.44■□□□□ 0.7
FDPS-212ENST00000487002 ROBO3Q96MS0 1386 aa19.44■□□□□ 0.7
FDPS-212ENST00000487002 MYL5Q02045 173 aa19.44■□□□□ 0.7
FDPS-212ENST00000487002 KANK3Q6NY19 840 aa19.44■□□□□ 0.7
FDPS-212ENST00000487002 OLFM4Q6UX06 510 aa19.44■□□□□ 0.7
FDPS-212ENST00000487002 AMIGO3Q86WK7 504 aa19.44■□□□□ 0.7
FDPS-212ENST00000487002 CTCFLQ8NI51 663 aaPredicted RBP19.44■□□□□ 0.7
FDPS-212ENST00000487002 KCND1Q9NSA2 647 aa19.44■□□□□ 0.7
FDPS-212ENST00000487002 TRIM75PA6NK02 468 aa19.43■□□□□ 0.7
FDPS-212ENST00000487002 NPHP1O15259 732 aa19.43■□□□□ 0.7
FDPS-212ENST00000487002 PLEKHA8P1O95397 391 aa19.43■□□□□ 0.7
FDPS-212ENST00000487002 MDM2Q00987 491 aaPredicted RBP19.43■□□□□ 0.7
FDPS-212ENST00000487002 NT5DC1Q5TFE4 455 aa19.43■□□□□ 0.7
FDPS-212ENST00000487002 MTERF4Q7Z6M4 381 aaKnown RBP19.43■□□□□ 0.7
FDPS-212ENST00000487002 CCDC150Q8NCX0 1101 aa19.43■□□□□ 0.7
FDPS-212ENST00000487002 VPS54Q9P1Q0 977 aa19.43■□□□□ 0.7
FDPS-212ENST00000487002 XDHP47989 1333 aa19.43■□□□□ 0.7
FDPS-212ENST00000487002 GSTO1P78417 241 aa19.42■□□□□ 0.7
FDPS-212ENST00000487002 CNBD1Q8NA66 436 aa19.42■□□□□ 0.7
FDPS-212ENST00000487002 SHISA4Q96DD7 197 aa19.42■□□□□ 0.7
FDPS-212ENST00000487002 XPO4Q9C0E2 1151 aaKnown RBP19.42■□□□□ 0.7
FDPS-212ENST00000487002 CABP5Q9NP86 173 aa19.42■□□□□ 0.7
FDPS-212ENST00000487002 SMC2O95347 1197 aa19.42■□□□□ 0.7
FDPS-212ENST00000487002 CCZ1BP86790 482 aa19.42■□□□□ 0.7
FDPS-212ENST00000487002 CCZ1P86791 482 aaPredicted RBP19.42■□□□□ 0.7
FDPS-212ENST00000487002 POSTNQ15063 836 aa19.42■□□□□ 0.7
FDPS-212ENST00000487002 FILIP1Q7Z7B0 1213 aa19.42■□□□□ 0.7
FDPS-212ENST00000487002 TXNRD3Q86VQ6 643 aa19.42■□□□□ 0.7
FDPS-212ENST00000487002 CERS3Q8IU89 383 aa19.42■□□□□ 0.7
FDPS-212ENST00000487002 TRIML1Q8N9V2 468 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms