RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 CCDC85BQ15834 202 aaPredicted RBP6.65□□□□□ -1.34
VPS13A-211ENST00000484581 SDE2Q6IQ49 451 aa6.65□□□□□ -1.34
VPS13A-211ENST00000484581 SPRED2Q7Z698 418 aa6.65□□□□□ -1.34
VPS13A-211ENST00000484581 RELL1Q8IUW5 271 aa6.65□□□□□ -1.34
VPS13A-211ENST00000484581 CKAP2LQ8IYA6 745 aa6.65□□□□□ -1.34
VPS13A-211ENST00000484581 KCNB2Q92953 911 aa6.65□□□□□ -1.34
VPS13A-211ENST00000484581 SSU72Q9NP77 194 aaKnown RBP6.65□□□□□ -1.34
VPS13A-211ENST00000484581 DISC1Q9NRI5 854 aa6.65□□□□□ -1.34
VPS13A-211ENST00000484581 KRT82Q9NSB4 513 aa6.65□□□□□ -1.34
VPS13A-211ENST00000484581 TMEM39AQ9NV64 488 aa6.65□□□□□ -1.34
VPS13A-211ENST00000484581 ADAMTS1Q9UHI8 967 aa6.65□□□□□ -1.34
VPS13A-211ENST00000484581 GPN3Q9UHW5 284 aaPredicted RBP6.65□□□□□ -1.34
VPS13A-211ENST00000484581 PCOLCE2Q9UKZ9 415 aa6.65□□□□□ -1.34
VPS13A-211ENST00000484581 FCGRTP55899 365 aa6.64□□□□□ -1.35
VPS13A-211ENST00000484581 NFE2L2Q16236 605 aa6.64□□□□□ -1.35
VPS13A-211ENST00000484581 KIF4BQ2VIQ3 1234 aa6.64□□□□□ -1.35
VPS13A-211ENST00000484581 ZNF746Q6NUN9 644 aaPredicted RBP6.64□□□□□ -1.35
VPS13A-211ENST00000484581 ANKRD13AQ8IZ07 590 aa6.64□□□□□ -1.35
VPS13A-211ENST00000484581 PLD6Q8N2A8 252 aaKnown RBP6.64□□□□□ -1.35
VPS13A-211ENST00000484581 FAM181AQ8N9Y4 354 aa6.64□□□□□ -1.35
VPS13A-211ENST00000484581 TMEM74Q96NL1 305 aa6.64□□□□□ -1.35
VPS13A-211ENST00000484581 VAV3Q9UKW4 847 aa6.64□□□□□ -1.35
VPS13A-211ENST00000484581 STRIP2Q9ULQ0 834 aa6.64□□□□□ -1.35
VPS13A-211ENST00000484581 SSBP05455 408 aaKnown RBP eCLIP6.63□□□□□ -1.35
VPS13A-211ENST00000484581 EIF4A3P38919 411 aaKnown RBP6.63□□□□□ -1.35
VPS13A-211ENST00000484581 TTLL4Q14679 1199 aa6.63□□□□□ -1.35
VPS13A-211ENST00000484581 SV2BQ7L1I2 683 aa6.63□□□□□ -1.35
VPS13A-211ENST00000484581 RHOVQ96L33 236 aa6.63□□□□□ -1.35
VPS13A-211ENST00000484581 KRTAP4-11Q9BYQ6 195 aa6.63□□□□□ -1.35
VPS13A-211ENST00000484581 KCNQ5Q9NR82 932 aa6.63□□□□□ -1.35
VPS13A-211ENST00000484581 PAPLNO95428 1278 aa6.62□□□□□ -1.35
VPS13A-211ENST00000484581 HCLS1P14317 486 aaPredicted RBP6.62□□□□□ -1.35
VPS13A-211ENST00000484581 GBP2P32456 591 aaPredicted RBP6.62□□□□□ -1.35
VPS13A-211ENST00000484581 NASPP49321 788 aaPredicted RBP6.62□□□□□ -1.35
VPS13A-211ENST00000484581 PRKCQQ04759 706 aa6.62□□□□□ -1.35
VPS13A-211ENST00000484581 SERINC3Q13530 473 aa6.62□□□□□ -1.35
VPS13A-211ENST00000484581 COL9A2Q14055 689 aaPredicted RBP6.62□□□□□ -1.35
VPS13A-211ENST00000484581 BMS1Q14692 1282 aaKnown RBP6.62□□□□□ -1.35
VPS13A-211ENST00000484581 EGFLAMQ63HQ2 1017 aa6.62□□□□□ -1.35
VPS13A-211ENST00000484581 NLGN1Q8N2Q7 840 aa6.62□□□□□ -1.35
VPS13A-211ENST00000484581 PI4K2BQ8TCG2 481 aa6.62□□□□□ -1.35
VPS13A-211ENST00000484581 MKL1Q969V6 931 aa6.62□□□□□ -1.35
VPS13A-211ENST00000484581 AKAP2Q9Y2D5 859 aa6.62□□□□□ -1.35
VPS13A-211ENST00000484581 LEFTY1O75610 366 aa6.61□□□□□ -1.35
VPS13A-211ENST00000484581 CD8BP10966 210 aa6.61□□□□□ -1.35
VPS13A-211ENST00000484581 FUT4P22083 530 aa6.61□□□□□ -1.35
VPS13A-211ENST00000484581 ARNTP27540 789 aa6.61□□□□□ -1.35
VPS13A-211ENST00000484581 SOX9P48436 509 aa6.61□□□□□ -1.35
VPS13A-211ENST00000484581 IFI16Q16666 785 aaKnown RBP6.61□□□□□ -1.35
VPS13A-211ENST00000484581 AOC3Q16853 763 aa6.61□□□□□ -1.35
VPS13A-211ENST00000484581 ATG4DQ86TL0 474 aaPredicted RBP6.61□□□□□ -1.35
VPS13A-211ENST00000484581 JAZF1Q86VZ6 243 aa6.61□□□□□ -1.35
VPS13A-211ENST00000484581 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.61□□□□□ -1.35
VPS13A-211ENST00000484581 SULF2Q8IWU5 870 aa6.61□□□□□ -1.35
VPS13A-211ENST00000484581 MRFAP1L1Q96HT8 127 aa6.61□□□□□ -1.35
VPS13A-211ENST00000484581 EAF1Q96JC9 268 aaPredicted RBP6.61□□□□□ -1.35
VPS13A-211ENST00000484581 NT5C1AQ9BXI3 368 aa6.61□□□□□ -1.35
VPS13A-211ENST00000484581 ZNF408Q9H9D4 720 aa6.61□□□□□ -1.35
VPS13A-211ENST00000484581 RC3H2Q9HBD1 1191 aaKnown RBP6.61□□□□□ -1.35
VPS13A-211ENST00000484581 MKNK2Q9HBH9 465 aa6.61□□□□□ -1.35
VPS13A-211ENST00000484581 SUPT16HQ9Y5B9 1047 aaKnown RBP6.61□□□□□ -1.35
VPS13A-211ENST00000484581 TMEM265A0A087WTH1 108 aa6.6□□□□□ -1.35
VPS13A-211ENST00000484581 ZNF662Q6ZS27 426 aa6.6□□□□□ -1.35
VPS13A-211ENST00000484581 PHC3Q8NDX5 983 aa6.6□□□□□ -1.35
VPS13A-211ENST00000484581 ZNF296Q8WUU4 475 aaPredicted RBP6.6□□□□□ -1.35
VPS13A-211ENST00000484581 HRASLS5Q96KN8 279 aa6.6□□□□□ -1.35
VPS13A-211ENST00000484581 DUSP23Q9BVJ7 150 aa6.6□□□□□ -1.35
VPS13A-211ENST00000484581 EMILIN2Q9BXX0 1053 aa6.6□□□□□ -1.35
VPS13A-211ENST00000484581 CEP44Q9C0F1 390 aa6.6□□□□□ -1.35
VPS13A-211ENST00000484581 MINDY4BA8MYZ0 360 aa6.59□□□□□ -1.35
VPS13A-211ENST00000484581 GARTP22102 1010 aa6.59□□□□□ -1.35
VPS13A-211ENST00000484581 LIG3P49916 1009 aa6.59□□□□□ -1.35
VPS13A-211ENST00000484581 MAP1SQ66K74 1059 aaPredicted RBP6.59□□□□□ -1.35
VPS13A-211ENST00000484581 PDZD3Q86UT5 571 aa6.59□□□□□ -1.35
VPS13A-211ENST00000484581 WFDC3Q8IUB2 231 aa6.59□□□□□ -1.35
VPS13A-211ENST00000484581 ISL2Q96A47 359 aa6.59□□□□□ -1.35
VPS13A-211ENST00000484581 ACSBG1Q96GR2 724 aa6.59□□□□□ -1.35
VPS13A-211ENST00000484581 CBX8Q9HC52 389 aa6.59□□□□□ -1.35
VPS13A-211ENST00000484581 GINM1Q9NU53 330 aa6.59□□□□□ -1.35
VPS13A-211ENST00000484581 MBNL3Q9NUK0 354 aaKnown RBP6.59□□□□□ -1.35
VPS13A-211ENST00000484581 SIRPGQ9P1W8 387 aa6.59□□□□□ -1.35
VPS13A-211ENST00000484581 EFR3BQ9Y2G0 817 aa6.59□□□□□ -1.35
VPS13A-211ENST00000484581 PCDHGC5Q9Y5F6 944 aa6.59□□□□□ -1.35
VPS13A-211ENST00000484581 F6X3S4 739 aa6.58□□□□□ -1.36
VPS13A-211ENST00000484581 GREM1O60565 184 aa6.58□□□□□ -1.36
VPS13A-211ENST00000484581 FBXO24O75426 580 aa6.58□□□□□ -1.36
VPS13A-211ENST00000484581 CEACAM5P06731 702 aa6.58□□□□□ -1.36
VPS13A-211ENST00000484581 RNASE1P07998 156 aaKnown RBP6.58□□□□□ -1.36
VPS13A-211ENST00000484581 NME2P22392 152 aa6.58□□□□□ -1.36
VPS13A-211ENST00000484581 CD96P40200 585 aa6.58□□□□□ -1.36
VPS13A-211ENST00000484581 OXCT1P55809 520 aa6.58□□□□□ -1.36
VPS13A-211ENST00000484581 LMNB2Q03252 620 aa6.58□□□□□ -1.36
VPS13A-211ENST00000484581 MAP3K11Q16584 847 aa6.58□□□□□ -1.36
VPS13A-211ENST00000484581 ZC3H12AQ5D1E8 599 aaKnown RBP6.58□□□□□ -1.36
VPS13A-211ENST00000484581 ZNF648Q5T619 568 aaPredicted RBP6.58□□□□□ -1.36
VPS13A-211ENST00000484581 FBXL19Q6PCT2 694 aa6.58□□□□□ -1.36
VPS13A-211ENST00000484581 TPTE2Q6XPS3 522 aa6.58□□□□□ -1.36
VPS13A-211ENST00000484581 TOP6BLQ8N6T0 577 aa6.58□□□□□ -1.36
VPS13A-211ENST00000484581 RNF214Q8ND24 703 aa6.58□□□□□ -1.36
VPS13A-211ENST00000484581 FAM168AQ92567 244 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms