RNA–Protein interactions for RNA: ENST00000484047.5

TTC3-218, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 1,945 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-218ENST00000484047 FAM182BQ5T319 152 aa11.81□□□□□ -0.52
TTC3-218ENST00000484047 MICALL1Q8N3F8 863 aa11.81□□□□□ -0.52
TTC3-218ENST00000484047 LEO1Q8WVC0 666 aaPredicted RBP11.81□□□□□ -0.52
TTC3-218ENST00000484047 SLC39A13Q96H72 371 aa11.81□□□□□ -0.52
TTC3-218ENST00000484047 CHURC1-FNTBB4DL54 471 aa11.8□□□□□ -0.52
TTC3-218ENST00000484047 AKAP10O43572 662 aa11.8□□□□□ -0.52
TTC3-218ENST00000484047 NEK2P51955 445 aa11.8□□□□□ -0.52
TTC3-218ENST00000484047 STRN3Q13033 797 aa11.8□□□□□ -0.52
TTC3-218ENST00000484047 PCSK7Q16549 785 aa11.8□□□□□ -0.52
TTC3-218ENST00000484047 SYT9Q86SS6 491 aa11.8□□□□□ -0.52
TTC3-218ENST00000484047 DDX54Q8TDD1 881 aaKnown RBP11.8□□□□□ -0.52
TTC3-218ENST00000484047 EVI5LQ96CN4 794 aa11.8□□□□□ -0.52
TTC3-218ENST00000484047 SMAD5Q99717 465 aaKnown RBP11.8□□□□□ -0.52
TTC3-218ENST00000484047 SMG9Q9H0W8 520 aaKnown RBP11.8□□□□□ -0.52
TTC3-218ENST00000484047 INTS7Q9NVH2 962 aaKnown RBP11.8□□□□□ -0.52
TTC3-218ENST00000484047 BICRAQ9NZM4 1560 aa11.8□□□□□ -0.52
TTC3-218ENST00000484047 TRAV20A0A0B4J274 112 aa11.8□□□□□ -0.52
TTC3-218ENST00000484047 H7C1W4 665 aa11.8□□□□□ -0.52
TTC3-218ENST00000484047 AGRPO00253 132 aa11.8□□□□□ -0.52
TTC3-218ENST00000484047 TMEM201Q5SNT2 666 aa11.8□□□□□ -0.52
TTC3-218ENST00000484047 DDX46Q7L014 1031 aaKnown RBP11.8□□□□□ -0.52
TTC3-218ENST00000484047 LGR4Q9BXB1 951 aa11.8□□□□□ -0.52
TTC3-218ENST00000484047 PHLDB1Q86UU1 1377 aa11.79□□□□□ -0.52
TTC3-218ENST00000484047 FGFR3P22607 806 aa11.79□□□□□ -0.52
TTC3-218ENST00000484047 CTBSQ01459 385 aa11.79□□□□□ -0.52
TTC3-218ENST00000484047 PTSQ03393 145 aa11.79□□□□□ -0.52
TTC3-218ENST00000484047 TSHZ1Q6ZSZ6 1077 aa11.79□□□□□ -0.52
TTC3-218ENST00000484047 HDXQ7Z353 690 aa11.79□□□□□ -0.52
TTC3-218ENST00000484047 DDX1Q92499 740 aaKnown RBP11.79□□□□□ -0.52
TTC3-218ENST00000484047 TRERF1Q96PN7 1200 aa11.79□□□□□ -0.52
TTC3-218ENST00000484047 CCDC8Q9H0W5 538 aaPredicted RBP11.79□□□□□ -0.52
TTC3-218ENST00000484047 CCDC86Q9H6F5 360 aaKnown RBP11.79□□□□□ -0.52
TTC3-218ENST00000484047 CHST12Q9NRB3 414 aa11.79□□□□□ -0.52
TTC3-218ENST00000484047 SUSD2Q9UGT4 822 aa11.79□□□□□ -0.52
TTC3-218ENST00000484047 CAND2O75155 1236 aa11.78□□□□□ -0.52
TTC3-218ENST00000484047 DNAJC8O75937 253 aaPredicted RBP11.78□□□□□ -0.52
TTC3-218ENST00000484047 PPP2R2AP63151 447 aa11.78□□□□□ -0.52
TTC3-218ENST00000484047 GSTM4Q03013 218 aa11.78□□□□□ -0.52
TTC3-218ENST00000484047 TRIM22Q8IYM9 498 aa11.78□□□□□ -0.52
TTC3-218ENST00000484047 MYO1HQ8N1T3 1032 aa11.78□□□□□ -0.52
TTC3-218ENST00000484047 MRPL4Q9BYD3 311 aaKnown RBP11.78□□□□□ -0.52
TTC3-218ENST00000484047 SLC35F4A4IF30 521 aa11.78□□□□□ -0.52
TTC3-218ENST00000484047 SOBPA7XYQ1 873 aa11.78□□□□□ -0.52
TTC3-218ENST00000484047 CYFIP1Q7L576 1253 aa11.78□□□□□ -0.52
TTC3-218ENST00000484047 PPFIBP1Q86W92 1011 aa11.78□□□□□ -0.52
TTC3-218ENST00000484047 AARSD1Q9BTE6 412 aaKnown RBP11.78□□□□□ -0.52
TTC3-218ENST00000484047 ARNT2Q9HBZ2 717 aa11.78□□□□□ -0.52
TTC3-218ENST00000484047 ATF3P18847 181 aa11.77□□□□□ -0.53
TTC3-218ENST00000484047 CDC25BP30305 580 aa11.77□□□□□ -0.53
TTC3-218ENST00000484047 GRIA2P42262 883 aa11.77□□□□□ -0.53
TTC3-218ENST00000484047 SCUBE1Q8IWY4 988 aa11.77□□□□□ -0.53
TTC3-218ENST00000484047 WDR66Q8TBY9 1149 aa11.77□□□□□ -0.53
TTC3-218ENST00000484047 MTMR8Q96EF0 704 aa11.77□□□□□ -0.53
TTC3-218ENST00000484047 NRSN2Q9GZP1 204 aa11.77□□□□□ -0.53
TTC3-218ENST00000484047 LRRC4BQ9NT99 713 aa11.77□□□□□ -0.53
TTC3-218ENST00000484047 SLC5A4Q9NY91 659 aa11.77□□□□□ -0.53
TTC3-218ENST00000484047 MAN1A2O60476 641 aa11.76□□□□□ -0.53
TTC3-218ENST00000484047 ARAFP10398 606 aa11.76□□□□□ -0.53
TTC3-218ENST00000484047 HSP90AA2PQ14568 343 aaPredicted RBP11.76□□□□□ -0.53
TTC3-218ENST00000484047 SYCP2LQ5T4T6 812 aa11.76□□□□□ -0.53
TTC3-218ENST00000484047 GTPBP3Q969Y2 492 aaKnown RBP11.76□□□□□ -0.53
TTC3-218ENST00000484047 ZNF837Q96EG3 531 aaPredicted RBP11.76□□□□□ -0.53
TTC3-218ENST00000484047 WDR89Q96FK6 387 aaPredicted RBP11.76□□□□□ -0.53
TTC3-218ENST00000484047 LPIN3Q9BQK8 851 aa11.76□□□□□ -0.53
TTC3-218ENST00000484047 SLC6A14Q9UN76 642 aa11.76□□□□□ -0.53
TTC3-218ENST00000484047 A0A0G2JS52 829 aa11.76□□□□□ -0.53
TTC3-218ENST00000484047 DCDC2CA8MYV0 355 aa11.76□□□□□ -0.53
TTC3-218ENST00000484047 ZNF862O60290 1169 aa11.76□□□□□ -0.53
TTC3-218ENST00000484047 KRT18P05783 430 aaKnown RBP11.76□□□□□ -0.53
TTC3-218ENST00000484047 PDE4BQ07343 736 aa11.76□□□□□ -0.53
TTC3-218ENST00000484047 ITKQ08881 620 aa11.76□□□□□ -0.53
TTC3-218ENST00000484047 PCBP1Q15365 356 aaKnown RBP eCLIP11.76□□□□□ -0.53
TTC3-218ENST00000484047 CHPFQ8IZ52 775 aa11.76□□□□□ -0.53
TTC3-218ENST00000484047 ELMO3Q96BJ8 720 aa11.76□□□□□ -0.53
TTC3-218ENST00000484047 ACSF2Q96CM8 615 aaPredicted RBP11.76□□□□□ -0.53
TTC3-218ENST00000484047 IPO9Q96P70 1041 aaKnown RBP11.76□□□□□ -0.53
TTC3-218ENST00000484047 TRIM8Q9BZR9 551 aa11.76□□□□□ -0.53
TTC3-218ENST00000484047 DACH1Q9UI36 760 aa11.76□□□□□ -0.53
TTC3-218ENST00000484047 PRAMEF27A3QJZ7 478 aa11.75□□□□□ -0.53
TTC3-218ENST00000484047 RAG1P15918 1043 aa11.75□□□□□ -0.53
TTC3-218ENST00000484047 TDRD10Q5VZ19 366 aaKnown RBP11.75□□□□□ -0.53
TTC3-218ENST00000484047 GDF6Q6KF10 455 aaPredicted RBP11.75□□□□□ -0.53
TTC3-218ENST00000484047 PKN3Q6P5Z2 889 aa11.75□□□□□ -0.53
TTC3-218ENST00000484047 ELMSAN1Q6PJG2 1045 aa11.75□□□□□ -0.53
TTC3-218ENST00000484047 NECAB2Q7Z6G3 386 aa11.75□□□□□ -0.53
TTC3-218ENST00000484047 SLC7A3Q8WY07 619 aa11.75□□□□□ -0.53
TTC3-218ENST00000484047 TRIM39Q9HCM9 518 aa11.75□□□□□ -0.53
TTC3-218ENST00000484047 TP53P04637 393 aaPredicted RBP11.74□□□□□ -0.53
TTC3-218ENST00000484047 PGRP06401 933 aa11.74□□□□□ -0.53
TTC3-218ENST00000484047 EPHX1P07099 455 aa11.74□□□□□ -0.53
TTC3-218ENST00000484047 CTSBP07858 339 aa11.74□□□□□ -0.53
TTC3-218ENST00000484047 GRK4P32298 578 aa11.74□□□□□ -0.53
TTC3-218ENST00000484047 APBB1IPQ7Z5R6 666 aaPredicted RBP11.74□□□□□ -0.53
TTC3-218ENST00000484047 TMEM192Q8IY95 271 aa11.74□□□□□ -0.53
TTC3-218ENST00000484047 PPM1KQ8N3J5 372 aa11.74□□□□□ -0.53
TTC3-218ENST00000484047 TTC8Q8TAM2 541 aa11.74□□□□□ -0.53
TTC3-218ENST00000484047 MPHOSPH6Q99547 160 aaKnown RBP11.74□□□□□ -0.53
TTC3-218ENST00000484047 APEX2Q9UBZ4 518 aa11.74□□□□□ -0.53
TTC3-218ENST00000484047 ITGAVP06756 1048 aa11.74□□□□□ -0.53
TTC3-218ENST00000484047 CPEP16870 476 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms