RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 SPEF2Q9C093 1822 aa8.66□□□□□ -1.02
CHD6-209ENST00000482596 GCN1Q92616 2671 aaKnown RBP8.65□□□□□ -1.02
CHD6-209ENST00000482596 GRXCR2A6NFK2 248 aa8.65□□□□□ -1.02
CHD6-209ENST00000482596 TCP10L2B9ZVM9 353 aa8.65□□□□□ -1.02
CHD6-209ENST00000482596 HRO43593 1189 aa8.65□□□□□ -1.02
CHD6-209ENST00000482596 CYP2B6P20813 491 aa8.65□□□□□ -1.02
CHD6-209ENST00000482596 ATP2B4P23634 1241 aa8.65□□□□□ -1.02
CHD6-209ENST00000482596 INPP5BP32019 993 aa8.65□□□□□ -1.02
CHD6-209ENST00000482596 NBR1Q14596 966 aa8.65□□□□□ -1.02
CHD6-209ENST00000482596 C6orf132Q5T0Z8 1188 aa8.65□□□□□ -1.02
CHD6-209ENST00000482596 LRP10Q7Z4F1 713 aa8.65□□□□□ -1.02
CHD6-209ENST00000482596 KCNV2Q8TDN2 545 aa8.65□□□□□ -1.02
CHD6-209ENST00000482596 ZBED2Q9BTP6 218 aa8.65□□□□□ -1.02
CHD6-209ENST00000482596 MIS18AQ9NYP9 233 aa8.65□□□□□ -1.02
CHD6-209ENST00000482596 ZNF70Q9UC06 446 aaPredicted RBP8.65□□□□□ -1.02
CHD6-209ENST00000482596 PRR23AA6NEV1 266 aa8.64□□□□□ -1.03
CHD6-209ENST00000482596 KLRK1P26718 216 aa8.64□□□□□ -1.03
CHD6-209ENST00000482596 FPGSQ05932 587 aa8.64□□□□□ -1.03
CHD6-209ENST00000482596 ATOH1Q92858 354 aaPredicted RBP8.64□□□□□ -1.03
CHD6-209ENST00000482596 RMDN1Q96DB5 314 aa8.64□□□□□ -1.03
CHD6-209ENST00000482596 COA1Q9GZY4 146 aa8.64□□□□□ -1.03
CHD6-209ENST00000482596 TDRD3Q9H7E2 651 aaKnown RBP8.64□□□□□ -1.03
CHD6-209ENST00000482596 PTPRFP10586 1907 aa8.64□□□□□ -1.03
CHD6-209ENST00000482596 ASH1LQ9NR48 2969 aaKnown RBP8.64□□□□□ -1.03
CHD6-209ENST00000482596 RPAP1Q9BWH6 1393 aaPredicted RBP8.63□□□□□ -1.03
CHD6-209ENST00000482596 SPTBN2O15020 2390 aa8.63□□□□□ -1.03
CHD6-209ENST00000482596 PPP1R3GB7ZBB8 358 aa8.63□□□□□ -1.03
CHD6-209ENST00000482596 ANXA1P04083 346 aa8.63□□□□□ -1.03
CHD6-209ENST00000482596 IL9P15248 144 aa8.63□□□□□ -1.03
CHD6-209ENST00000482596 RBM5P52756 815 aaKnown RBP eCLIP8.63□□□□□ -1.03
CHD6-209ENST00000482596 TNFAIP1Q13829 316 aa8.63□□□□□ -1.03
CHD6-209ENST00000482596 C16orf59Q7L2K0 433 aa8.63□□□□□ -1.03
CHD6-209ENST00000482596 MCM10Q7L590 875 aa8.63□□□□□ -1.03
CHD6-209ENST00000482596 DGLUCYQ7Z3D6 616 aa8.63□□□□□ -1.03
CHD6-209ENST00000482596 GAS2L2Q8NHY3 880 aa8.63□□□□□ -1.03
CHD6-209ENST00000482596 SLC28A3Q9HAS3 691 aa8.63□□□□□ -1.03
CHD6-209ENST00000482596 MSRAQ9UJ68 235 aa8.63□□□□□ -1.03
CHD6-209ENST00000482596 MAP3K7O43318 606 aa8.62□□□□□ -1.03
CHD6-209ENST00000482596 SNX17Q15036 470 aa8.62□□□□□ -1.03
CHD6-209ENST00000482596 CCL14Q16627 93 aa8.62□□□□□ -1.03
CHD6-209ENST00000482596 PROSER3Q2NL68 480 aa8.62□□□□□ -1.03
CHD6-209ENST00000482596 GJC2Q5T442 439 aaPredicted RBP8.62□□□□□ -1.03
CHD6-209ENST00000482596 RASIP1Q5U651 963 aa8.62□□□□□ -1.03
CHD6-209ENST00000482596 SMCR8Q8TEV9 937 aaPredicted RBP8.62□□□□□ -1.03
CHD6-209ENST00000482596 ZFYVE26Q68DK2 2539 aa8.62□□□□□ -1.03
CHD6-209ENST00000482596 ASPMQ8IZT6 3477 aa8.62□□□□□ -1.03
CHD6-209ENST00000482596 PROB1E7EW31 1015 aa8.61□□□□□ -1.03
CHD6-209ENST00000482596 DNM1LO00429 736 aa8.61□□□□□ -1.03
CHD6-209ENST00000482596 RAG1P15918 1043 aa8.61□□□□□ -1.03
CHD6-209ENST00000482596 TLE2Q04725 743 aa8.61□□□□□ -1.03
CHD6-209ENST00000482596 DCTN1Q14203 1278 aa8.61□□□□□ -1.03
CHD6-209ENST00000482596 RAB30Q15771 203 aa8.61□□□□□ -1.03
CHD6-209ENST00000482596 TMEM240Q5SV17 173 aa8.61□□□□□ -1.03
CHD6-209ENST00000482596 CCDC85AQ96PX6 553 aaPredicted RBP8.61□□□□□ -1.03
CHD6-209ENST00000482596 GAKO14976 1311 aa8.6□□□□□ -1.03
CHD6-209ENST00000482596 EPOPA6NHQ4 379 aa8.6□□□□□ -1.03
CHD6-209ENST00000482596 ZIC2O95409 532 aaPredicted RBP8.6□□□□□ -1.03
CHD6-209ENST00000482596 MYOGP15173 224 aa8.6□□□□□ -1.03
CHD6-209ENST00000482596 POU3F3P20264 500 aaPredicted RBP8.6□□□□□ -1.03
CHD6-209ENST00000482596 CACNB3P54284 484 aa8.6□□□□□ -1.03
CHD6-209ENST00000482596 FAM110CQ1W6H9 321 aa8.6□□□□□ -1.03
CHD6-209ENST00000482596 GADL1Q6ZQY3 521 aa8.6□□□□□ -1.03
CHD6-209ENST00000482596 MIGA2Q7L4E1 593 aa8.6□□□□□ -1.03
CHD6-209ENST00000482596 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.6□□□□□ -1.03
CHD6-209ENST00000482596 JAG2Q9Y219 1238 aa8.6□□□□□ -1.03
CHD6-209ENST00000482596 NAV2Q8IVL1 2488 aa8.6□□□□□ -1.03
CHD6-209ENST00000482596 H0Y858 1186 aa8.59□□□□□ -1.03
CHD6-209ENST00000482596 KIAA0355O15063 1070 aa8.59□□□□□ -1.03
CHD6-209ENST00000482596 CLTBP09497 229 aa8.59□□□□□ -1.03
CHD6-209ENST00000482596 ZKSCAN1P17029 563 aaPredicted RBP8.59□□□□□ -1.03
CHD6-209ENST00000482596 CCT4P50991 539 aaKnown RBP8.59□□□□□ -1.03
CHD6-209ENST00000482596 RABGGTBP53611 331 aa8.59□□□□□ -1.03
CHD6-209ENST00000482596 PROX2Q3B8N5 592 aa8.59□□□□□ -1.03
CHD6-209ENST00000482596 HSP90AB3PQ58FF7 597 aa8.59□□□□□ -1.03
CHD6-209ENST00000482596 PPP2R2DQ66LE6 453 aa8.59□□□□□ -1.03
CHD6-209ENST00000482596 COPS6Q7L5N1 327 aa8.59□□□□□ -1.03
CHD6-209ENST00000482596 MORC1Q86VD1 984 aa8.59□□□□□ -1.03
CHD6-209ENST00000482596 FERMT2Q96AC1 680 aa8.59□□□□□ -1.03
CHD6-209ENST00000482596 PHACTR3Q96KR7 559 aa8.59□□□□□ -1.03
CHD6-209ENST00000482596 PRRX2Q99811 253 aa8.59□□□□□ -1.03
CHD6-209ENST00000482596 CERS4Q9HA82 394 aa8.59□□□□□ -1.03
CHD6-209ENST00000482596 TLR9Q9NR96 1032 aa8.59□□□□□ -1.03
CHD6-209ENST00000482596 TACC3Q9Y6A5 838 aa8.59□□□□□ -1.03
CHD6-209ENST00000482596 PHIPQ8WWQ0 1821 aa8.59□□□□□ -1.03
CHD6-209ENST00000482596 CEP250Q9BV73 2442 aa8.58□□□□□ -1.04
CHD6-209ENST00000482596 A0A0G2JLL6 359 aaPredicted RBP8.58□□□□□ -1.04
CHD6-209ENST00000482596 BHMG1C9JSJ3 638 aaPredicted RBP8.58□□□□□ -1.04
CHD6-209ENST00000482596 IRS4O14654 1257 aaPredicted RBP8.58□□□□□ -1.04
CHD6-209ENST00000482596 PEX10O60683 326 aa8.58□□□□□ -1.04
CHD6-209ENST00000482596 ACRP10323 421 aa8.58□□□□□ -1.04
CHD6-209ENST00000482596 AIMP1Q12904 312 aaKnown RBP8.58□□□□□ -1.04
CHD6-209ENST00000482596 TSR1Q2NL82 804 aaKnown RBP8.58□□□□□ -1.04
CHD6-209ENST00000482596 PRRT2Q7Z6L0 340 aaPredicted RBP8.58□□□□□ -1.04
CHD6-209ENST00000482596 ADSSL1Q8N142 457 aa8.58□□□□□ -1.04
CHD6-209ENST00000482596 LPAR1Q92633 364 aa8.58□□□□□ -1.04
CHD6-209ENST00000482596 DDX20Q9UHI6 824 aaKnown RBP8.58□□□□□ -1.04
CHD6-209ENST00000482596 FRYLO94915 3013 aa8.57□□□□□ -1.04
CHD6-209ENST00000482596 COL4A4P53420 1690 aaPredicted RBP8.57□□□□□ -1.04
CHD6-209ENST00000482596 EP300Q09472 2414 aaPredicted RBP8.57□□□□□ -1.04
CHD6-209ENST00000482596 CYSRT1A8MQ03 144 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms