RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 DOCK3Q8IZD9 2030 aa22.98■■□□□ 1.27
ABCF3-214ENST00000480562 CEP290O15078 2479 aa22.97■■□□□ 1.27
ABCF3-214ENST00000480562 H0YGN5 161 aa22.97■■□□□ 1.27
ABCF3-214ENST00000480562 BACE1P56817 501 aa22.97■■□□□ 1.27
ABCF3-214ENST00000480562 U2AF1L4Q8WU68 220 aaKnown RBP22.97■■□□□ 1.27
ABCF3-214ENST00000480562 HLA-DOAP06340 250 aa22.96■■□□□ 1.27
ABCF3-214ENST00000480562 USP5P45974 858 aa22.96■■□□□ 1.27
ABCF3-214ENST00000480562 PXYLP1Q8TE99 480 aa22.96■■□□□ 1.27
ABCF3-214ENST00000480562 TMOD4Q9NZQ9 345 aa22.96■■□□□ 1.27
ABCF3-214ENST00000480562 ZBTB21Q9ULJ3 1066 aa22.96■■□□□ 1.27
ABCF3-214ENST00000480562 MAP3K12Q12852 859 aa22.95■■□□□ 1.26
ABCF3-214ENST00000480562 UBE2Q1Q7Z7E8 422 aa22.95■■□□□ 1.26
ABCF3-214ENST00000480562 DPF3Q92784 378 aa22.95■■□□□ 1.26
ABCF3-214ENST00000480562 PCDH10Q9P2E7 1040 aa22.95■■□□□ 1.26
ABCF3-214ENST00000480562 COLQQ9Y215 455 aaPredicted RBP22.95■■□□□ 1.26
ABCF3-214ENST00000480562 APBB1O00213 710 aa22.94■■□□□ 1.26
ABCF3-214ENST00000480562 PEX10O60683 326 aa22.94■■□□□ 1.26
ABCF3-214ENST00000480562 IRX3P78415 501 aaPredicted RBP22.94■■□□□ 1.26
ABCF3-214ENST00000480562 RHPN1Q8TCX5 695 aa22.94■■□□□ 1.26
ABCF3-214ENST00000480562 P2RX7Q99572 595 aaKnown RBP22.94■■□□□ 1.26
ABCF3-214ENST00000480562 USP17L10C9JJH3 530 aa22.93■■□□□ 1.26
ABCF3-214ENST00000480562 SGPL1O95470 568 aa22.93■■□□□ 1.26
ABCF3-214ENST00000480562 HSP90AB4PQ58FF6 505 aa22.93■■□□□ 1.26
ABCF3-214ENST00000480562 DEFB118Q96PH6 123 aa22.93■■□□□ 1.26
ABCF3-214ENST00000480562 BCL11AQ9H165 835 aa22.93■■□□□ 1.26
ABCF3-214ENST00000480562 GINM1Q9NU53 330 aa22.93■■□□□ 1.26
ABCF3-214ENST00000480562 C19orf81C9J6K1 198 aa22.92■■□□□ 1.26
ABCF3-214ENST00000480562 FARP2O94887 1054 aaPredicted RBP22.92■■□□□ 1.26
ABCF3-214ENST00000480562 GH2P01242 217 aa22.92■■□□□ 1.26
ABCF3-214ENST00000480562 MS4A1P11836 297 aa22.92■■□□□ 1.26
ABCF3-214ENST00000480562 HOXA7P31268 230 aaPredicted RBP22.92■■□□□ 1.26
ABCF3-214ENST00000480562 MORF4L1Q9UBU8 362 aa22.92■■□□□ 1.26
ABCF3-214ENST00000480562 GJD2Q9UKL4 321 aa22.92■■□□□ 1.26
ABCF3-214ENST00000480562 MYH1P12882 1939 aa22.92■■□□□ 1.26
ABCF3-214ENST00000480562 CERS3Q8IU89 383 aa22.91■■□□□ 1.26
ABCF3-214ENST00000480562 TXNRD2Q9NNW7 524 aa22.91■■□□□ 1.26
ABCF3-214ENST00000480562 EMILIN3Q9NT22 766 aa22.91■■□□□ 1.26
ABCF3-214ENST00000480562 COG6Q9Y2V7 657 aa22.91■■□□□ 1.26
ABCF3-214ENST00000480562 TFRCP02786 760 aaKnown RBP22.9■■□□□ 1.26
ABCF3-214ENST00000480562 HERVK_113P62684 666 aa22.9■■□□□ 1.26
ABCF3-214ENST00000480562 SIRT2Q8IXJ6 389 aa22.9■■□□□ 1.26
ABCF3-214ENST00000480562 RIOK1Q9BRS2 568 aaKnown RBP22.9■■□□□ 1.26
ABCF3-214ENST00000480562 PAK6Q9NQU5 681 aaPredicted RBP22.9■■□□□ 1.26
ABCF3-214ENST00000480562 SERPINB13Q9UIV8 391 aa22.9■■□□□ 1.26
ABCF3-214ENST00000480562 TATDN1Q6P1N9 297 aa22.89■■□□□ 1.25
ABCF3-214ENST00000480562 USP17L2Q6R6M4 530 aa22.89■■□□□ 1.25
ABCF3-214ENST00000480562 RPAP2Q8IXW5 612 aaPredicted RBP22.89■■□□□ 1.25
ABCF3-214ENST00000480562 KIF1BPQ96EK5 621 aa22.89■■□□□ 1.25
ABCF3-214ENST00000480562 HTATIP2Q9BUP3 242 aa22.89■■□□□ 1.25
ABCF3-214ENST00000480562 MAGEB6P1A0A0J9YX57 407 aa22.88■■□□□ 1.25
ABCF3-214ENST00000480562 FXR1P51114 621 aaKnown RBP eCLIP22.88■■□□□ 1.25
ABCF3-214ENST00000480562 TRIM32Q13049 653 aa22.88■■□□□ 1.25
ABCF3-214ENST00000480562 ZYXQ15942 572 aaKnown RBP22.88■■□□□ 1.25
ABCF3-214ENST00000480562 TTC6Q86TZ1 520 aa22.88■■□□□ 1.25
ABCF3-214ENST00000480562 CLASRPQ8N2M8 674 aaKnown RBP22.88■■□□□ 1.25
ABCF3-214ENST00000480562 GPRC5AQ8NFJ5 357 aa22.88■■□□□ 1.25
ABCF3-214ENST00000480562 DNAJC2Q99543 621 aaKnown RBP22.88■■□□□ 1.25
ABCF3-214ENST00000480562 EHD4Q9H223 541 aa22.88■■□□□ 1.25
ABCF3-214ENST00000480562 ZBTB40Q9NUA8 1239 aa22.88■■□□□ 1.25
ABCF3-214ENST00000480562 RBPJLQ9UBG7 517 aa22.88■■□□□ 1.25
ABCF3-214ENST00000480562 DDX19BQ9UMR2 479 aa22.88■■□□□ 1.25
ABCF3-214ENST00000480562 GOLIM4O00461 696 aa22.87■■□□□ 1.25
ABCF3-214ENST00000480562 HMMRO75330 724 aa22.87■■□□□ 1.25
ABCF3-214ENST00000480562 HMGCRP04035 888 aa22.87■■□□□ 1.25
ABCF3-214ENST00000480562 IFIT2P09913 472 aaKnown RBP22.87■■□□□ 1.25
ABCF3-214ENST00000480562 PDE6AP16499 860 aa22.87■■□□□ 1.25
ABCF3-214ENST00000480562 PLCD1P51178 756 aa22.87■■□□□ 1.25
ABCF3-214ENST00000480562 RAB3GAP1Q15042 981 aa22.87■■□□□ 1.25
ABCF3-214ENST00000480562 TTF1Q15361 905 aaPredicted RBP22.87■■□□□ 1.25
ABCF3-214ENST00000480562 SLC9C2Q5TAH2 1124 aa22.87■■□□□ 1.25
ABCF3-214ENST00000480562 TMED8Q6PL24 325 aaPredicted RBP22.87■■□□□ 1.25
ABCF3-214ENST00000480562 CHRDL2Q6WN34 429 aa22.87■■□□□ 1.25
ABCF3-214ENST00000480562 FEZ1Q99689 392 aa22.87■■□□□ 1.25
ABCF3-214ENST00000480562 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.87■■□□□ 1.25
ABCF3-214ENST00000480562 CYP2B6P20813 491 aa22.86■■□□□ 1.25
ABCF3-214ENST00000480562 Q3C1V9 767 aa22.86■■□□□ 1.25
ABCF3-214ENST00000480562 CERKLQ49MI3 558 aaPredicted RBP22.86■■□□□ 1.25
ABCF3-214ENST00000480562 POTEEQ6S8J3 1075 aa22.86■■□□□ 1.25
ABCF3-214ENST00000480562 EDC3Q96F86 508 aaKnown RBP22.86■■□□□ 1.25
ABCF3-214ENST00000480562 PAGR1Q9BTK6 254 aa22.86■■□□□ 1.25
ABCF3-214ENST00000480562 CRISPLD2Q9H0B8 497 aa22.86■■□□□ 1.25
ABCF3-214ENST00000480562 ZNF532Q9HCE3 1301 aa22.85■■□□□ 1.25
ABCF3-214ENST00000480562 TRIOBPQ9H2D6 2365 aa22.85■■□□□ 1.25
ABCF3-214ENST00000480562 PLXNB2O15031 1838 aa22.85■■□□□ 1.25
ABCF3-214ENST00000480562 POLR3DP05423 398 aaPredicted RBP22.85■■□□□ 1.25
ABCF3-214ENST00000480562 SHMT1P34896 483 aa22.85■■□□□ 1.25
ABCF3-214ENST00000480562 EVX2Q03828 476 aa22.85■■□□□ 1.25
ABCF3-214ENST00000480562 ABCB5Q2M3G0 1257 aa22.85■■□□□ 1.25
ABCF3-214ENST00000480562 ACER1Q8TDN7 264 aa22.85■■□□□ 1.25
ABCF3-214ENST00000480562 PORCNQ9H237 461 aa22.85■■□□□ 1.25
ABCF3-214ENST00000480562 ERVK-9P63128 1117 aa22.84■■□□□ 1.25
ABCF3-214ENST00000480562 ERVK-24P63145 666 aa22.84■■□□□ 1.25
ABCF3-214ENST00000480562 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.84■■□□□ 1.25
ABCF3-214ENST00000480562 TRIB2Q92519 343 aa22.84■■□□□ 1.25
ABCF3-214ENST00000480562 CRNKL1Q9BZJ0 848 aaKnown RBP22.84■■□□□ 1.25
ABCF3-214ENST00000480562 CCAR1Q8IX12 1150 aaKnown RBP22.83■■□□□ 1.25
ABCF3-214ENST00000480562 PAWRQ96IZ0 340 aaKnown RBP22.83■■□□□ 1.25
ABCF3-214ENST00000480562 C12orf42Q96LP6 360 aa22.83■■□□□ 1.25
ABCF3-214ENST00000480562 NUDT12Q9BQG2 462 aa22.83■■□□□ 1.25
ABCF3-214ENST00000480562 HMX1Q9NP08 348 aaPredicted RBP22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms