RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 EPB41L4AQ9HCS5 686 aaPredicted RBP6.07□□□□□ -1.44
HDAC6-223ENST00000480525 DIAPH3Q9NSV4 1193 aa6.07□□□□□ -1.44
HDAC6-223ENST00000480525 TCP11L1Q9NUJ3 509 aa6.07□□□□□ -1.44
HDAC6-223ENST00000480525 MCM9Q9NXL9 1143 aa6.07□□□□□ -1.44
HDAC6-223ENST00000480525 AFG3L2Q9Y4W6 797 aa6.07□□□□□ -1.44
HDAC6-223ENST00000480525 SLC4A4Q9Y6R1 1079 aa6.07□□□□□ -1.44
HDAC6-223ENST00000480525 MGAMO43451 1857 aa6.07□□□□□ -1.44
HDAC6-223ENST00000480525 ZNF236Q9UL36 1845 aa6.06□□□□□ -1.44
HDAC6-223ENST00000480525 A0A0D9SFI3 127 aa6.06□□□□□ -1.44
HDAC6-223ENST00000480525 USP17L5A8MUK1 530 aa6.06□□□□□ -1.44
HDAC6-223ENST00000480525 TRIM6-TRIM34B2RNG4 842 aa6.06□□□□□ -1.44
HDAC6-223ENST00000480525 USP17L12C9JPN9 530 aa6.06□□□□□ -1.44
HDAC6-223ENST00000480525 USP17L21D6R901 530 aa6.06□□□□□ -1.44
HDAC6-223ENST00000480525 M0R2C6 588 aa6.06□□□□□ -1.44
HDAC6-223ENST00000480525 GNRH1P01148 92 aa6.06□□□□□ -1.44
HDAC6-223ENST00000480525 POLR3DP05423 398 aaPredicted RBP6.06□□□□□ -1.44
HDAC6-223ENST00000480525 HOXA7P31268 230 aaPredicted RBP6.06□□□□□ -1.44
HDAC6-223ENST00000480525 DYNLL1P63167 89 aaKnown RBP6.06□□□□□ -1.44
HDAC6-223ENST00000480525 IRX6P78412 446 aaPredicted RBP6.06□□□□□ -1.44
HDAC6-223ENST00000480525 TCP10Q12799 353 aa6.06□□□□□ -1.44
HDAC6-223ENST00000480525 PABPC4Q13310 644 aaKnown RBP eCLIP6.06□□□□□ -1.44
HDAC6-223ENST00000480525 PICALMQ13492 652 aa6.06□□□□□ -1.44
HDAC6-223ENST00000480525 TSHZ3Q63HK5 1081 aa6.06□□□□□ -1.44
HDAC6-223ENST00000480525 MAPKAPK5Q8IW41 473 aa6.06□□□□□ -1.44
HDAC6-223ENST00000480525 CDAN1Q8IWY9 1227 aa6.06□□□□□ -1.44
HDAC6-223ENST00000480525 ZFPM1Q8IX07 1006 aa6.06□□□□□ -1.44
HDAC6-223ENST00000480525 CRACR2BQ8N4Y2 399 aaPredicted RBP6.06□□□□□ -1.44
HDAC6-223ENST00000480525 ZNF280CQ8ND82 737 aa6.06□□□□□ -1.44
HDAC6-223ENST00000480525 SDR42E1Q8WUS8 393 aa6.06□□□□□ -1.44
HDAC6-223ENST00000480525 STAG1Q8WVM7 1258 aa6.06□□□□□ -1.44
HDAC6-223ENST00000480525 MAP4K1Q92918 833 aa6.06□□□□□ -1.44
HDAC6-223ENST00000480525 IL17RAQ96F46 866 aa6.06□□□□□ -1.44
HDAC6-223ENST00000480525 TTC14Q96N46 770 aa6.06□□□□□ -1.44
HDAC6-223ENST00000480525 TRIM34Q9BYJ4 488 aa6.06□□□□□ -1.44
HDAC6-223ENST00000480525 NAPBQ9H115 298 aa6.06□□□□□ -1.44
HDAC6-223ENST00000480525 CNNM2Q9H8M5 875 aa6.06□□□□□ -1.44
HDAC6-223ENST00000480525 KANSL2Q9H9L4 492 aa6.06□□□□□ -1.44
HDAC6-223ENST00000480525 PRDM10Q9NQV6 1147 aa6.06□□□□□ -1.44
HDAC6-223ENST00000480525 PICK1Q9NRD5 415 aa6.06□□□□□ -1.44
HDAC6-223ENST00000480525 NYAP2Q9P242 653 aa6.06□□□□□ -1.44
HDAC6-223ENST00000480525 PALD1Q9ULE6 856 aa6.06□□□□□ -1.44
HDAC6-223ENST00000480525 ZBTB21Q9ULJ3 1066 aa6.06□□□□□ -1.44
HDAC6-223ENST00000480525 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.06□□□□□ -1.44
HDAC6-223ENST00000480525 WDR19Q8NEZ3 1342 aa6.05□□□□□ -1.44
HDAC6-223ENST00000480525 IGKV6D-41A0A0C4DH26 115 aa6.05□□□□□ -1.44
HDAC6-223ENST00000480525 UBE2Q2LH0YL09 131 aa6.05□□□□□ -1.44
HDAC6-223ENST00000480525 IRF6O14896 467 aa6.05□□□□□ -1.44
HDAC6-223ENST00000480525 PLA2G6O60733 806 aa6.05□□□□□ -1.44
HDAC6-223ENST00000480525 CDC45O75419 566 aa6.05□□□□□ -1.44
HDAC6-223ENST00000480525 FGAP02671 866 aa6.05□□□□□ -1.44
HDAC6-223ENST00000480525 FDX1P10109 184 aa6.05□□□□□ -1.44
HDAC6-223ENST00000480525 CAPN2P17655 700 aa6.05□□□□□ -1.44
HDAC6-223ENST00000480525 INPP5BP32019 993 aa6.05□□□□□ -1.44
HDAC6-223ENST00000480525 TDO2P48775 406 aa6.05□□□□□ -1.44
HDAC6-223ENST00000480525 PLCD1P51178 756 aa6.05□□□□□ -1.44
HDAC6-223ENST00000480525 BACE1P56817 501 aa6.05□□□□□ -1.44
HDAC6-223ENST00000480525 FMR1Q06787 632 aaKnown RBP eCLIP6.05□□□□□ -1.443e-7■■■■■ 27.4
HDAC6-223ENST00000480525 PPARAQ07869 468 aa6.05□□□□□ -1.44
HDAC6-223ENST00000480525 NMIQ13287 307 aaPredicted RBP6.05□□□□□ -1.44
HDAC6-223ENST00000480525 TTLL12Q14166 644 aaPredicted RBP6.05□□□□□ -1.44
HDAC6-223ENST00000480525 CERKLQ49MI3 558 aaPredicted RBP6.05□□□□□ -1.44
HDAC6-223ENST00000480525 IFNL1Q8IU54 200 aa6.05□□□□□ -1.44
HDAC6-223ENST00000480525 TEX2Q8IWB9 1127 aa6.05□□□□□ -1.44
HDAC6-223ENST00000480525 FBXL16Q8N461 479 aa6.05□□□□□ -1.44
HDAC6-223ENST00000480525 NEDD1Q8NHV4 660 aa6.05□□□□□ -1.44
HDAC6-223ENST00000480525 RILPL2Q969X0 211 aa6.05□□□□□ -1.44
HDAC6-223ENST00000480525 OPTNQ96CV9 577 aa6.05□□□□□ -1.44
HDAC6-223ENST00000480525 ZNF408Q9H9D4 720 aa6.05□□□□□ -1.44
HDAC6-223ENST00000480525 CABP5Q9NP86 173 aa6.05□□□□□ -1.44
HDAC6-223ENST00000480525 PNMA3Q9UL41 463 aa6.05□□□□□ -1.44
HDAC6-223ENST00000480525 AGTPBP1Q9UPW5 1226 aa6.05□□□□□ -1.44
HDAC6-223ENST00000480525 U3KPZ7 1027 aaPredicted RBP6.05□□□□□ -1.44
HDAC6-223ENST00000480525 ADGRA2Q96PE1 1338 aa6.04□□□□□ -1.44
HDAC6-223ENST00000480525 RBBP6Q7Z6E9 1792 aaKnown RBP6.04□□□□□ -1.44
HDAC6-223ENST00000480525 USP17L10C9JJH3 530 aa6.04□□□□□ -1.44
HDAC6-223ENST00000480525 PRKAB2O43741 272 aa6.04□□□□□ -1.44
HDAC6-223ENST00000480525 REC8O95072 547 aa6.04□□□□□ -1.44
HDAC6-223ENST00000480525 RASA1P20936 1047 aa6.04□□□□□ -1.44
HDAC6-223ENST00000480525 GCLCP48506 637 aaPredicted RBP6.04□□□□□ -1.44
HDAC6-223ENST00000480525 CDK8P49336 464 aa6.04□□□□□ -1.44
HDAC6-223ENST00000480525 RCAN1P53805 252 aa6.04□□□□□ -1.44
HDAC6-223ENST00000480525 MOGSQ13724 837 aa6.04□□□□□ -1.44
HDAC6-223ENST00000480525 IMMTQ16891 758 aaKnown RBP6.04□□□□□ -1.44
HDAC6-223ENST00000480525 ABCB5Q2M3G0 1257 aa6.04□□□□□ -1.44
HDAC6-223ENST00000480525 AKNAD1Q5T1N1 836 aa6.04□□□□□ -1.44
HDAC6-223ENST00000480525 PRAMEF18Q5VWM3 479 aa6.04□□□□□ -1.44
HDAC6-223ENST00000480525 CYP4F22Q6NT55 531 aa6.04□□□□□ -1.44
HDAC6-223ENST00000480525 CWC27Q6UX04 472 aaKnown RBP6.04□□□□□ -1.44
HDAC6-223ENST00000480525 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.04□□□□□ -1.44
HDAC6-223ENST00000480525 ZNF589Q86UQ0 364 aaPredicted RBP6.04□□□□□ -1.44
HDAC6-223ENST00000480525 DGKHQ86XP1 1220 aa6.04□□□□□ -1.44
HDAC6-223ENST00000480525 GMCL1P1Q8NEA9 526 aa6.04□□□□□ -1.44
HDAC6-223ENST00000480525 ANKS1AQ92625 1134 aa6.04□□□□□ -1.44
HDAC6-223ENST00000480525 KCNB2Q92953 911 aa6.04□□□□□ -1.44
HDAC6-223ENST00000480525 ZKSCAN4Q969J2 545 aaPredicted RBP6.04□□□□□ -1.44
HDAC6-223ENST00000480525 CLMNQ96JQ2 1002 aa6.04□□□□□ -1.44
HDAC6-223ENST00000480525 FAM227BQ96M60 508 aa6.04□□□□□ -1.44
HDAC6-223ENST00000480525 SEC62Q99442 399 aaKnown RBP6.04□□□□□ -1.44
HDAC6-223ENST00000480525 PARK7Q99497 189 aaKnown RBP6.04□□□□□ -1.44
HDAC6-223ENST00000480525 ESYT1Q9BSJ8 1104 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms