RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 MAGEB6Q8N7X4 407 aa10.95□□□□□ -0.66
VCP-206ENST00000480327 FAM163AQ96GL9 167 aaPredicted RBP10.95□□□□□ -0.66
VCP-206ENST00000480327 UNC93B1Q9H1C4 597 aa10.95□□□□□ -0.66
VCP-206ENST00000480327 MROH7-TTC4A0A0A0MT08 1334 aa10.94□□□□□ -0.66
VCP-206ENST00000480327 FAM196BA6NMK8 535 aa10.94□□□□□ -0.66
VCP-206ENST00000480327 CYP7A1P22680 504 aa10.94□□□□□ -0.66
VCP-206ENST00000480327 BTDP43251 543 aa10.94□□□□□ -0.66
VCP-206ENST00000480327 GSTO1P78417 241 aa10.94□□□□□ -0.66
VCP-206ENST00000480327 SLC9C2Q5TAH2 1124 aa10.94□□□□□ -0.66
VCP-206ENST00000480327 CHRDL2Q6WN34 429 aa10.94□□□□□ -0.66
VCP-206ENST00000480327 RAET1EQ8TD07 263 aa10.94□□□□□ -0.66
VCP-206ENST00000480327 RILPL2Q969X0 211 aa10.94□□□□□ -0.66
VCP-206ENST00000480327 PARK7Q99497 189 aaKnown RBP10.94□□□□□ -0.66
VCP-206ENST00000480327 DDX60LQ5H9U9 1706 aaKnown RBP10.94□□□□□ -0.66
VCP-206ENST00000480327 FRMPD3Q5JV73 1810 aa10.93□□□□□ -0.66
VCP-206ENST00000480327 GPR75-ASB3A0A0A6YYF3 556 aa10.93□□□□□ -0.66
VCP-206ENST00000480327 LDHCP07864 332 aa10.93□□□□□ -0.66
VCP-206ENST00000480327 ELNP15502 786 aa10.93□□□□□ -0.66
VCP-206ENST00000480327 PDE6AP16499 860 aa10.93□□□□□ -0.66
VCP-206ENST00000480327 FCGRTP55899 365 aa10.93□□□□□ -0.66
VCP-206ENST00000480327 PICALMQ13492 652 aa10.93□□□□□ -0.66
VCP-206ENST00000480327 TREML2Q5T2D2 321 aa10.93□□□□□ -0.66
VCP-206ENST00000480327 GADL1Q6ZQY3 521 aa10.93□□□□□ -0.66
VCP-206ENST00000480327 ADGRA1Q86SQ6 560 aa10.93□□□□□ -0.66
VCP-206ENST00000480327 SLF2Q8IX21 1173 aa10.93□□□□□ -0.66
VCP-206ENST00000480327 MIGA1Q8NAN2 632 aa10.93□□□□□ -0.66
VCP-206ENST00000480327 FSD1Q9BTV5 496 aa10.93□□□□□ -0.66
VCP-206ENST00000480327 RNF208Q9H0X6 261 aa10.93□□□□□ -0.66
VCP-206ENST00000480327 OSBPL3Q9H4L5 887 aa10.93□□□□□ -0.66
VCP-206ENST00000480327 RBM27Q9P2N5 1060 aaKnown RBP10.93□□□□□ -0.66
VCP-206ENST00000480327 SLC45A1Q9Y2W3 748 aa10.93□□□□□ -0.66
VCP-206ENST00000480327 GTF3C3Q9Y5Q9 886 aa10.93□□□□□ -0.66
VCP-206ENST00000480327 MYH1P12882 1939 aa10.93□□□□□ -0.66
VCP-206ENST00000480327 MYH7P12883 1935 aa10.93□□□□□ -0.66
VCP-206ENST00000480327 COL2A1P02458 1487 aaPredicted RBP10.93□□□□□ -0.66
VCP-206ENST00000480327 DNAH12Q6ZR08 3092 aa10.93□□□□□ -0.66
VCP-206ENST00000480327 ZNF532Q9HCE3 1301 aa10.92□□□□□ -0.66
VCP-206ENST00000480327 TRIM75PA6NK02 468 aa10.92□□□□□ -0.66
VCP-206ENST00000480327 CTNND1O60716 968 aaKnown RBP10.92□□□□□ -0.66
VCP-206ENST00000480327 HOXD10P28358 340 aa10.92□□□□□ -0.66
VCP-206ENST00000480327 FLT3LGP49771 235 aa10.92□□□□□ -0.66
VCP-206ENST00000480327 DYNLL1P63167 89 aaKnown RBP10.92□□□□□ -0.66
VCP-206ENST00000480327 FASTKD5Q7L8L6 764 aaKnown RBP10.92□□□□□ -0.66
VCP-206ENST00000480327 KBTBD3Q8NAB2 608 aa10.92□□□□□ -0.66
VCP-206ENST00000480327 U2AF1L4Q8WU68 220 aaKnown RBP10.92□□□□□ -0.66
VCP-206ENST00000480327 NOL10Q9BSC4 688 aaKnown RBP10.92□□□□□ -0.66
VCP-206ENST00000480327 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.92□□□□□ -0.66
VCP-206ENST00000480327 AATFQ9NY61 560 aaKnown RBP eCLIP10.92□□□□□ -0.66
VCP-206ENST00000480327 ADCY3O60266 1144 aa10.91□□□□□ -0.66
VCP-206ENST00000480327 TBC1D12O60347 775 aa10.91□□□□□ -0.66
VCP-206ENST00000480327 SGPL1O95470 568 aa10.91□□□□□ -0.66
VCP-206ENST00000480327 GSPT1P15170 499 aaKnown RBP10.91□□□□□ -0.66
VCP-206ENST00000480327 ADD2P35612 726 aa10.91□□□□□ -0.66
VCP-206ENST00000480327 JAG1P78504 1218 aa10.91□□□□□ -0.66
VCP-206ENST00000480327 TTC22Q5TAA0 569 aa10.91□□□□□ -0.66
VCP-206ENST00000480327 ZSCAN29Q8IWY8 852 aaPredicted RBP10.91□□□□□ -0.66
VCP-206ENST00000480327 SLAIN1Q8ND83 568 aa10.91□□□□□ -0.66
VCP-206ENST00000480327 DPF3Q92784 378 aa10.91□□□□□ -0.66
VCP-206ENST00000480327 EVI5LQ96CN4 794 aa10.91□□□□□ -0.66
VCP-206ENST00000480327 PICK1Q9NRD5 415 aa10.91□□□□□ -0.66
VCP-206ENST00000480327 AGTPBP1Q9UPW5 1226 aa10.91□□□□□ -0.66
VCP-206ENST00000480327 TCRBV5S4A2TA0A5A2 114 aa10.9□□□□□ -0.66
VCP-206ENST00000480327 RNF113AO15541 343 aaKnown RBP10.9□□□□□ -0.66
VCP-206ENST00000480327 NPM3O75607 178 aaKnown RBP10.9□□□□□ -0.66
VCP-206ENST00000480327 FARP2O94887 1054 aaPredicted RBP10.9□□□□□ -0.66
VCP-206ENST00000480327 INHAP05111 366 aa10.9□□□□□ -0.66
VCP-206ENST00000480327 IRF5Q13568 498 aa10.9□□□□□ -0.66
VCP-206ENST00000480327 SHROOM1Q2M3G4 852 aaPredicted RBP10.9□□□□□ -0.66
VCP-206ENST00000480327 ZSCAN25Q6NSZ9 544 aa10.9□□□□□ -0.66
VCP-206ENST00000480327 ANKRD13CQ8N6S4 541 aa10.9□□□□□ -0.66
VCP-206ENST00000480327 NKX2-3Q8TAU0 364 aa10.9□□□□□ -0.66
VCP-206ENST00000480327 PXYLP1Q8TE99 480 aa10.9□□□□□ -0.66
VCP-206ENST00000480327 SH3RF3Q8TEJ3 882 aaPredicted RBP10.9□□□□□ -0.66
VCP-206ENST00000480327 CRISPLD2Q9H0B8 497 aa10.9□□□□□ -0.66
VCP-206ENST00000480327 PAK6Q9NQU5 681 aaPredicted RBP10.9□□□□□ -0.66
VCP-206ENST00000480327 BIN2Q9UBW5 565 aaPredicted RBP10.9□□□□□ -0.66
VCP-206ENST00000480327 LAMA2P24043 3122 aaKnown RBP10.89□□□□□ -0.67
VCP-206ENST00000480327 MAGEB6P1A0A0J9YX57 407 aa10.89□□□□□ -0.67
VCP-206ENST00000480327 PEX10O60683 326 aa10.89□□□□□ -0.67
VCP-206ENST00000480327 BAG3O95817 575 aa10.89□□□□□ -0.67
VCP-206ENST00000480327 SDSP20132 328 aa10.89□□□□□ -0.67
VCP-206ENST00000480327 MNX1P50219 401 aaPredicted RBP10.89□□□□□ -0.67
VCP-206ENST00000480327 UBXN2AP68543 259 aa10.89□□□□□ -0.67
VCP-206ENST00000480327 TRIM32Q13049 653 aa10.89□□□□□ -0.67
VCP-206ENST00000480327 TEX11Q8IYF3 940 aa10.89□□□□□ -0.67
VCP-206ENST00000480327 OSBPL5Q9H0X9 879 aaPredicted RBP10.89□□□□□ -0.67
VCP-206ENST00000480327 ARMT1Q9H993 441 aa10.89□□□□□ -0.67
VCP-206ENST00000480327 M0R2C6 588 aa10.88□□□□□ -0.67
VCP-206ENST00000480327 SOX1O00570 391 aaPredicted RBP10.88□□□□□ -0.67
VCP-206ENST00000480327 TNPO2O14787 897 aaKnown RBP10.88□□□□□ -0.67
VCP-206ENST00000480327 MBD4O95243 580 aa10.88□□□□□ -0.67
VCP-206ENST00000480327 SPP2Q13103 211 aa10.88□□□□□ -0.67
VCP-206ENST00000480327 UBE3CQ15386 1083 aa10.88□□□□□ -0.67
VCP-206ENST00000480327 FAM110CQ1W6H9 321 aa10.88□□□□□ -0.67
VCP-206ENST00000480327 LRRFIP1Q32MZ4 808 aaKnown RBP10.88□□□□□ -0.67
VCP-206ENST00000480327 LCORLQ8N3X6 602 aa10.88□□□□□ -0.67
VCP-206ENST00000480327 PROCA1Q8NCQ7 364 aaPredicted RBP10.88□□□□□ -0.67
VCP-206ENST00000480327 SMCR8Q8TEV9 937 aaPredicted RBP10.88□□□□□ -0.67
VCP-206ENST00000480327 DIS3LQ8TF46 1054 aaKnown RBP10.88□□□□□ -0.67
VCP-206ENST00000480327 TGFBRAP1Q8WUH2 860 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms