RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 FMR1Q06787 632 aaKnown RBP eCLIP15.57■□□□□ 0.081e-10■□□□□ 10.1
HDAC1-206ENST00000476391 RESP18Q5W5W9 173 aa15.57■□□□□ 0.08
HDAC1-206ENST00000476391 KDM7AQ6ZMT4 941 aa15.57■□□□□ 0.08
HDAC1-206ENST00000476391 EAF2Q96CJ1 260 aaPredicted RBP15.57■□□□□ 0.08
HDAC1-206ENST00000476391 BABAM1Q9NWV8 329 aa15.57■□□□□ 0.08
HDAC1-206ENST00000476391 C3P01024 1663 aa15.56■□□□□ 0.08
HDAC1-206ENST00000476391 TTMPQ5BVD1 217 aa15.56■□□□□ 0.08
HDAC1-206ENST00000476391 NT5DC1Q5TFE4 455 aa15.56■□□□□ 0.08
HDAC1-206ENST00000476391 TTLL7Q6ZT98 887 aa15.56■□□□□ 0.08
HDAC1-206ENST00000476391 STOX1Q6ZVD7 989 aa15.56■□□□□ 0.08
HDAC1-206ENST00000476391 GSPT2Q8IYD1 628 aaKnown RBP15.56■□□□□ 0.08
HDAC1-206ENST00000476391 TRIML1Q8N9V2 468 aa15.56■□□□□ 0.08
HDAC1-206ENST00000476391 SAAL1Q96ER3 474 aa15.56■□□□□ 0.08
HDAC1-206ENST00000476391 PHAXQ9H814 394 aaKnown RBP15.56■□□□□ 0.08
HDAC1-206ENST00000476391 TPX2Q9ULW0 747 aaKnown RBP15.56■□□□□ 0.08
HDAC1-206ENST00000476391 ITIH6Q6UXX5 1313 aa15.56■□□□□ 0.08
HDAC1-206ENST00000476391 CPS1P31327 1500 aa15.56■□□□□ 0.08
HDAC1-206ENST00000476391 FRMD3A2A2Y4 597 aa15.56■□□□□ 0.08
HDAC1-206ENST00000476391 SNUPNO95149 360 aaKnown RBP15.56■□□□□ 0.08
HDAC1-206ENST00000476391 SND1Q7KZF4 910 aaKnown RBP eCLIP15.56■□□□□ 0.08
HDAC1-206ENST00000476391 MICAL1Q8TDZ2 1067 aa15.56■□□□□ 0.08
HDAC1-206ENST00000476391 CTAGE1Q96RT6 745 aa15.56■□□□□ 0.08
HDAC1-206ENST00000476391 MAN1B1Q9UKM7 699 aa15.56■□□□□ 0.08
HDAC1-206ENST00000476391 MAP3K15Q6ZN16 1313 aa15.56■□□□□ 0.08
HDAC1-206ENST00000476391 TEX33O43247 280 aa15.55■□□□□ 0.08
HDAC1-206ENST00000476391 ZMYND10O75800 440 aa15.55■□□□□ 0.08
HDAC1-206ENST00000476391 IPO7O95373 1038 aaKnown RBP15.55■□□□□ 0.08
HDAC1-206ENST00000476391 ZMYM6O95789 1325 aa15.55■□□□□ 0.08
HDAC1-206ENST00000476391 ERCC5P28715 1186 aaPredicted RBP15.55■□□□□ 0.08
HDAC1-206ENST00000476391 MARCKSP29966 332 aaPredicted RBP15.55■□□□□ 0.08
HDAC1-206ENST00000476391 CYP26C1Q6V0L0 522 aa15.55■□□□□ 0.08
HDAC1-206ENST00000476391 CCDC121Q6ZUS5 278 aa15.55■□□□□ 0.08
HDAC1-206ENST00000476391 APTXQ7Z2E3 356 aaKnown RBP15.55■□□□□ 0.08
HDAC1-206ENST00000476391 CPLX3Q8WVH0 158 aa15.55■□□□□ 0.08
HDAC1-206ENST00000476391 KIF9Q9HAQ2 790 aa15.55■□□□□ 0.08
HDAC1-206ENST00000476391 SAMSN1Q9NSI8 373 aaKnown RBP15.55■□□□□ 0.08
HDAC1-206ENST00000476391 TAOK2Q9UL54 1235 aa15.55■□□□□ 0.08
HDAC1-206ENST00000476391 EME2A4GXA9 379 aaPredicted RBP15.55■□□□□ 0.08
HDAC1-206ENST00000476391 TTC36A6NLP5 189 aa15.55■□□□□ 0.08
HDAC1-206ENST00000476391 HSF2BPO75031 334 aa15.55■□□□□ 0.08
HDAC1-206ENST00000476391 PPP1R37O75864 691 aa15.55■□□□□ 0.08
HDAC1-206ENST00000476391 FAM107AO95990 144 aa15.55■□□□□ 0.08
HDAC1-206ENST00000476391 CASP14P31944 242 aa15.55■□□□□ 0.08
HDAC1-206ENST00000476391 MDM2Q00987 491 aaPredicted RBP15.55■□□□□ 0.08
HDAC1-206ENST00000476391 IFT88Q13099 833 aa15.55■□□□□ 0.08
HDAC1-206ENST00000476391 LONRF3Q496Y0 759 aa15.55■□□□□ 0.08
HDAC1-206ENST00000476391 HDGFL1Q5TGJ6 251 aa15.55■□□□□ 0.08
HDAC1-206ENST00000476391 MYCBPAPQ8TBZ2 947 aa15.55■□□□□ 0.08
HDAC1-206ENST00000476391 TCP11Q8WWU5 503 aa15.55■□□□□ 0.08
HDAC1-206ENST00000476391 SPDL1Q96EA4 605 aa15.55■□□□□ 0.08
HDAC1-206ENST00000476391 SCLT1Q96NL6 688 aa15.55■□□□□ 0.08
HDAC1-206ENST00000476391 NUCKS1Q9H1E3 243 aaKnown RBP15.55■□□□□ 0.08
HDAC1-206ENST00000476391 HAUS4Q9H6D7 363 aa15.55■□□□□ 0.08
HDAC1-206ENST00000476391 CPSF2Q9P2I0 782 aaKnown RBP15.55■□□□□ 0.08
HDAC1-206ENST00000476391 TSPOAP1O95153 1857 aa15.55■□□□□ 0.08
HDAC1-206ENST00000476391 MED1Q15648 1581 aaPredicted RBP15.54■□□□□ 0.08
HDAC1-206ENST00000476391 PES1O00541 588 aaKnown RBP15.54■□□□□ 0.08
HDAC1-206ENST00000476391 PECAM1P16284 738 aaPredicted RBP15.54■□□□□ 0.08
HDAC1-206ENST00000476391 TAF7Q15545 349 aaPredicted RBP15.54■□□□□ 0.08
HDAC1-206ENST00000476391 PTGISQ16647 500 aa15.54■□□□□ 0.08
HDAC1-206ENST00000476391 EMBQ6PCB8 327 aa15.54■□□□□ 0.08
HDAC1-206ENST00000476391 FBXL16Q8N461 479 aa15.54■□□□□ 0.08
HDAC1-206ENST00000476391 C3orf20Q8ND61 904 aa15.54■□□□□ 0.08
HDAC1-206ENST00000476391 ARL8AQ96BM9 186 aa15.54■□□□□ 0.08
HDAC1-206ENST00000476391 CCT8L2Q96SF2 557 aa15.54■□□□□ 0.08
HDAC1-206ENST00000476391 SASH1O94885 1247 aa15.54■□□□□ 0.08
HDAC1-206ENST00000476391 IBSPP21815 317 aaPredicted RBP15.54■□□□□ 0.08
HDAC1-206ENST00000476391 ERVK-24P63145 666 aa15.54■□□□□ 0.08
HDAC1-206ENST00000476391 KIF23Q02241 960 aaPredicted RBP15.54■□□□□ 0.08
HDAC1-206ENST00000476391 APBA1Q02410 837 aa15.54■□□□□ 0.08
HDAC1-206ENST00000476391 SLMAPQ14BN4 828 aa15.54■□□□□ 0.08
HDAC1-206ENST00000476391 ZC3H12AQ5D1E8 599 aaKnown RBP15.54■□□□□ 0.08
HDAC1-206ENST00000476391 OTUD7BQ6GQQ9 843 aa15.54■□□□□ 0.08
HDAC1-206ENST00000476391 NLRP14Q86W24 1093 aa15.54■□□□□ 0.08
HDAC1-206ENST00000476391 CCDC8Q9H0W5 538 aaPredicted RBP15.54■□□□□ 0.08
HDAC1-206ENST00000476391 ADD3Q9UEY8 706 aaKnown RBP15.54■□□□□ 0.08
HDAC1-206ENST00000476391 KCNH3Q9ULD8 1083 aa15.54■□□□□ 0.08
HDAC1-206ENST00000476391 PA2G4Q9UQ80 394 aaKnown RBP15.54■□□□□ 0.08
HDAC1-206ENST00000476391 GYPCP04921 128 aa15.53■□□□□ 0.08
HDAC1-206ENST00000476391 PRPHP41219 470 aa15.53■□□□□ 0.08
HDAC1-206ENST00000476391 SARSP49591 514 aaKnown RBP15.53■□□□□ 0.08
HDAC1-206ENST00000476391 EPHB4P54760 987 aa15.53■□□□□ 0.08
HDAC1-206ENST00000476391 XRCC4Q13426 336 aa15.53■□□□□ 0.08
HDAC1-206ENST00000476391 MORC3Q14149 939 aa15.53■□□□□ 0.08
HDAC1-206ENST00000476391 E2F5Q15329 346 aa15.53■□□□□ 0.08
HDAC1-206ENST00000476391 FILIP1LQ4L180 1135 aa15.53■□□□□ 0.08
HDAC1-206ENST00000476391 LMBR1Q8WVP7 490 aa15.53■□□□□ 0.08
HDAC1-206ENST00000476391 PLCD4Q9BRC7 762 aa15.53■□□□□ 0.08
HDAC1-206ENST00000476391 MGRN1O60291 552 aa15.53■□□□□ 0.08
HDAC1-206ENST00000476391 SKAP2O75563 359 aaPredicted RBP15.53■□□□□ 0.08
HDAC1-206ENST00000476391 PLCD1P51178 756 aa15.53■□□□□ 0.08
HDAC1-206ENST00000476391 MCMDC2Q4G0Z9 681 aa15.53■□□□□ 0.08
HDAC1-206ENST00000476391 TRMT44Q8IYL2 757 aaKnown RBP15.53■□□□□ 0.08
HDAC1-206ENST00000476391 EHBP1Q8NDI1 1231 aa15.53■□□□□ 0.08
HDAC1-206ENST00000476391 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.53■□□□□ 0.08
HDAC1-206ENST00000476391 KIF28PB7ZC32 967 aa15.52■□□□□ 0.08
HDAC1-206ENST00000476391 SEMA3EO15041 775 aa15.52■□□□□ 0.08
HDAC1-206ENST00000476391 PPFIA3O75145 1194 aa15.52■□□□□ 0.08
HDAC1-206ENST00000476391 CLSTN1O94985 981 aa15.52■□□□□ 0.08
HDAC1-206ENST00000476391 ATP1A1P05023 1023 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms