RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 SPACA3Q8IXA5 215 aa8.15□□□□□ -1.1
LTN1-204ENST00000475344 TJP2Q9UDY2 1190 aa8.15□□□□□ -1.1
LTN1-204ENST00000475344 MAPK8IP1Q9UQF2 711 aa8.15□□□□□ -1.1
LTN1-204ENST00000475344 RNF114Q9Y508 228 aa8.15□□□□□ -1.1
LTN1-204ENST00000475344 CORINQ9Y5Q5 1042 aa8.15□□□□□ -1.1
LTN1-204ENST00000475344 CNTNAP4Q9C0A0 1308 aa8.14□□□□□ -1.11
LTN1-204ENST00000475344 PRR33A8MZF0 331 aa8.14□□□□□ -1.11
LTN1-204ENST00000475344 CBX7O95931 251 aa8.14□□□□□ -1.11
LTN1-204ENST00000475344 CST3P01034 146 aaPredicted RBP8.14□□□□□ -1.11
LTN1-204ENST00000475344 LMNB2Q03252 620 aa8.14□□□□□ -1.11
LTN1-204ENST00000475344 IKZF1Q13422 519 aa8.14□□□□□ -1.11
LTN1-204ENST00000475344 NKPD1Q17RQ9 610 aa8.14□□□□□ -1.11
LTN1-204ENST00000475344 TMCO4Q5TGY1 634 aa8.14□□□□□ -1.11
LTN1-204ENST00000475344 ANGEL2Q5VTE6 544 aaKnown RBP8.14□□□□□ -1.11
LTN1-204ENST00000475344 CDKAL1Q5VV42 579 aa8.14□□□□□ -1.11
LTN1-204ENST00000475344 CBLL1Q75N03 491 aa8.14□□□□□ -1.11
LTN1-204ENST00000475344 PI4K2BQ8TCG2 481 aa8.14□□□□□ -1.11
LTN1-204ENST00000475344 TMEM87BQ96K49 555 aa8.14□□□□□ -1.11
LTN1-204ENST00000475344 TMEM74Q96NL1 305 aa8.14□□□□□ -1.11
LTN1-204ENST00000475344 TNKS2Q9H2K2 1166 aa8.14□□□□□ -1.11
LTN1-204ENST00000475344 RBAK-RBAKDNI3L0D1 243 aa8.13□□□□□ -1.11
LTN1-204ENST00000475344 F13A1P00488 732 aa8.13□□□□□ -1.11
LTN1-204ENST00000475344 PLCG1P19174 1290 aa8.13□□□□□ -1.11
LTN1-204ENST00000475344 FUT4P22083 530 aa8.13□□□□□ -1.11
LTN1-204ENST00000475344 CAP2P40123 477 aa8.13□□□□□ -1.11
LTN1-204ENST00000475344 SNAP47Q5SQN1 464 aa8.13□□□□□ -1.11
LTN1-204ENST00000475344 ASB11Q8WXH4 323 aa8.13□□□□□ -1.11
LTN1-204ENST00000475344 BCL11AQ9H165 835 aa8.13□□□□□ -1.11
LTN1-204ENST00000475344 PRDM7Q9NQW5 492 aa8.13□□□□□ -1.11
LTN1-204ENST00000475344 SNX11Q9Y5W9 270 aa8.13□□□□□ -1.11
LTN1-204ENST00000475344 TACC3Q9Y6A5 838 aa8.13□□□□□ -1.11
LTN1-204ENST00000475344 PWP1Q13610 501 aa8.12□□□□□ -1.11
LTN1-204ENST00000475344 SLC6A19Q695T7 634 aa8.12□□□□□ -1.11
LTN1-204ENST00000475344 ZNF746Q6NUN9 644 aaPredicted RBP8.12□□□□□ -1.11
LTN1-204ENST00000475344 MFSD4AQ8N468 514 aa8.12□□□□□ -1.11
LTN1-204ENST00000475344 RSRP1Q9BUV0 290 aa8.12□□□□□ -1.11
LTN1-204ENST00000475344 RC3H2Q9HBD1 1191 aaKnown RBP8.12□□□□□ -1.11
LTN1-204ENST00000475344 H3BS24 57 aa8.11□□□□□ -1.11
LTN1-204ENST00000475344 GRIN3BO60391 1043 aa8.11□□□□□ -1.11
LTN1-204ENST00000475344 RNASE1P07998 156 aaKnown RBP8.11□□□□□ -1.11
LTN1-204ENST00000475344 CYP7A1P22680 504 aa8.11□□□□□ -1.11
LTN1-204ENST00000475344 MRPL41Q8IXM3 137 aaKnown RBP8.11□□□□□ -1.11
LTN1-204ENST00000475344 GOLM1Q8NBJ4 401 aa8.11□□□□□ -1.11
LTN1-204ENST00000475344 FAM13CQ8NE31 585 aa8.11□□□□□ -1.11
LTN1-204ENST00000475344 GATAD2BQ8WXI9 593 aa8.11□□□□□ -1.11
LTN1-204ENST00000475344 ACSF2Q96CM8 615 aaPredicted RBP8.11□□□□□ -1.11
LTN1-204ENST00000475344 RHOVQ96L33 236 aa8.11□□□□□ -1.11
LTN1-204ENST00000475344 HSPA12BQ96MM6 686 aa8.11□□□□□ -1.11
LTN1-204ENST00000475344 KBTBD4Q9NVX7 518 aa8.11□□□□□ -1.11
LTN1-204ENST00000475344 ADAMTS6Q9UKP5 1117 aa8.11□□□□□ -1.11
LTN1-204ENST00000475344 CILPO75339 1184 aa8.1□□□□□ -1.11
LTN1-204ENST00000475344 CLCN7P51798 805 aa8.1□□□□□ -1.11
LTN1-204ENST00000475344 ZP2Q05996 745 aa8.1□□□□□ -1.11
LTN1-204ENST00000475344 CCDC84Q86UT8 332 aaPredicted RBP8.1□□□□□ -1.11
LTN1-204ENST00000475344 COPRSQ9NQ92 184 aa8.1□□□□□ -1.11
LTN1-204ENST00000475344 ADAM30Q9UKF2 790 aa8.1□□□□□ -1.11
LTN1-204ENST00000475344 FAM221AA4D161 298 aa8.09□□□□□ -1.11
LTN1-204ENST00000475344 UPK3BL1B0FP48 263 aa8.09□□□□□ -1.11
LTN1-204ENST00000475344 UPK3BL2E5RIL1 263 aa8.09□□□□□ -1.11
LTN1-204ENST00000475344 TLR3O15455 904 aaKnown RBP8.09□□□□□ -1.11
LTN1-204ENST00000475344 MCATQ8IVS2 390 aaKnown RBP8.09□□□□□ -1.11
LTN1-204ENST00000475344 MBNL3Q9NUK0 354 aaKnown RBP8.09□□□□□ -1.11
LTN1-204ENST00000475344 KLHL3Q9UH77 587 aa8.09□□□□□ -1.11
LTN1-204ENST00000475344 PITPNM2Q9BZ72 1349 aa8.08□□□□□ -1.12
LTN1-204ENST00000475344 ZNF865P0CJ78 1059 aaPredicted RBP8.08□□□□□ -1.12
LTN1-204ENST00000475344 LRRN4CLQ8ND94 238 aa8.08□□□□□ -1.12
LTN1-204ENST00000475344 FBXO27Q8NI29 283 aa8.08□□□□□ -1.12
LTN1-204ENST00000475344 ASIC4Q96FT7 647 aa8.08□□□□□ -1.12
LTN1-204ENST00000475344 ATP13A1Q9HD20 1204 aa8.08□□□□□ -1.12
LTN1-204ENST00000475344 CAPN6Q9Y6Q1 641 aa8.08□□□□□ -1.12
LTN1-204ENST00000475344 JUNBP17275 347 aaPredicted RBP8.07□□□□□ -1.12
LTN1-204ENST00000475344 ETV3P41162 512 aa8.07□□□□□ -1.12
LTN1-204ENST00000475344 CARS2Q9HA77 564 aaKnown RBP8.07□□□□□ -1.12
LTN1-204ENST00000475344 GGT7Q9UJ14 662 aa8.07□□□□□ -1.12
LTN1-204ENST00000475344 BIN1O00499 593 aa8.06□□□□□ -1.12
LTN1-204ENST00000475344 ITGB5P18084 799 aa8.06□□□□□ -1.12
LTN1-204ENST00000475344 TXKP42681 527 aa8.06□□□□□ -1.12
LTN1-204ENST00000475344 TNNI2P48788 182 aa8.06□□□□□ -1.12
LTN1-204ENST00000475344 YARSP54577 528 aaKnown RBP8.06□□□□□ -1.12
LTN1-204ENST00000475344 MFAP1P55081 439 aaKnown RBP8.06□□□□□ -1.12
LTN1-204ENST00000475344 SLC23A3Q6PIS1 610 aa8.06□□□□□ -1.12
LTN1-204ENST00000475344 HOMEZQ8IX15 550 aa8.06□□□□□ -1.12
LTN1-204ENST00000475344 SEMA3GQ9NS98 782 aa8.06□□□□□ -1.12
LTN1-204ENST00000475344 ZSWIM5Q9P217 1185 aa8.06□□□□□ -1.12
LTN1-204ENST00000475344 REV1Q9UBZ9 1251 aa8.06□□□□□ -1.12
LTN1-204ENST00000475344 PAPLNO95428 1278 aa8.05□□□□□ -1.12
LTN1-204ENST00000475344 KIR3DL1P43629 444 aa8.05□□□□□ -1.12
LTN1-204ENST00000475344 TNK2Q07912 1038 aa8.05□□□□□ -1.12
LTN1-204ENST00000475344 MPP2Q14168 576 aa8.05□□□□□ -1.12
LTN1-204ENST00000475344 MRPL58Q14197 206 aaKnown RBP8.05□□□□□ -1.12
LTN1-204ENST00000475344 FBXL19Q6PCT2 694 aa8.05□□□□□ -1.12
LTN1-204ENST00000475344 C22orf34Q6ZV56 151 aa8.05□□□□□ -1.12
LTN1-204ENST00000475344 HS2ST1Q7LGA3 356 aa8.05□□□□□ -1.12
LTN1-204ENST00000475344 ERMP1Q7Z2K6 904 aa8.05□□□□□ -1.12
LTN1-204ENST00000475344 TMEM87AQ8NBN3 555 aa8.05□□□□□ -1.12
LTN1-204ENST00000475344 UBE2FQ969M7 185 aa8.05□□□□□ -1.12
LTN1-204ENST00000475344 KRTAP9-2Q9BYQ4 174 aa8.05□□□□□ -1.12
LTN1-204ENST00000475344 CEP131Q9UPN4 1083 aa8.05□□□□□ -1.12
LTN1-204ENST00000475344 POLR3KQ9Y2Y1 108 aaPredicted RBP8.05□□□□□ -1.12
LTN1-204ENST00000475344 ST14Q9Y5Y6 855 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms