RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 STX1AQ16623 288 aa11.65□□□□□ -0.54
APTX-216ENST00000472896 USP17L1Q7RTZ2 530 aa11.65□□□□□ -0.54
APTX-216ENST00000472896 CKAP2LQ8IYA6 745 aa11.65□□□□□ -0.54
APTX-216ENST00000472896 C10orf67Q8IYJ2 551 aa11.65□□□□□ -0.54
APTX-216ENST00000472896 SECISBP2LQ93073 1101 aaKnown RBP11.65□□□□□ -0.54
APTX-216ENST00000472896 SMARCE1Q969G3 411 aa11.65□□□□□ -0.54
APTX-216ENST00000472896 SPATA32Q96LK8 384 aa11.65□□□□□ -0.54
APTX-216ENST00000472896 DNAJC25Q9H1X3 360 aa11.65□□□□□ -0.54
APTX-216ENST00000472896 RRP15Q9Y3B9 282 aaKnown RBP11.65□□□□□ -0.54
APTX-216ENST00000472896 CHL1O00533 1208 aa11.64□□□□□ -0.55
APTX-216ENST00000472896 POLR3GO15318 223 aaPredicted RBP11.64□□□□□ -0.55
APTX-216ENST00000472896 RPS6KA5O75582 802 aa11.64□□□□□ -0.55
APTX-216ENST00000472896 OAS2P29728 719 aaKnown RBP11.64□□□□□ -0.55
APTX-216ENST00000472896 MAGEA9P43362 315 aa11.64□□□□□ -0.55
APTX-216ENST00000472896 FXR1P51114 621 aaKnown RBP eCLIP11.64□□□□□ -0.55
APTX-216ENST00000472896 ATP8B2P98198 1209 aa11.64□□□□□ -0.55
APTX-216ENST00000472896 CERS3Q8IU89 383 aa11.64□□□□□ -0.55
APTX-216ENST00000472896 CCDC83Q8IWF9 413 aa11.64□□□□□ -0.55
APTX-216ENST00000472896 KCNB2Q92953 911 aa11.64□□□□□ -0.55
APTX-216ENST00000472896 CCDC85AQ96PX6 553 aaPredicted RBP11.64□□□□□ -0.55
APTX-216ENST00000472896 LSG1Q9H089 658 aaKnown RBP11.64□□□□□ -0.55
APTX-216ENST00000472896 PDRG1Q9NUG6 133 aa11.64□□□□□ -0.55
APTX-216ENST00000472896 FZD1Q9UP38 647 aa11.64□□□□□ -0.55
APTX-216ENST00000472896 GNAI3P08754 354 aa11.64□□□□□ -0.55
APTX-216ENST00000472896 EN2P19622 333 aaPredicted RBP11.64□□□□□ -0.55
APTX-216ENST00000472896 CASTP20810 708 aaKnown RBP11.64□□□□□ -0.55
APTX-216ENST00000472896 ACTN2P35609 894 aa11.64□□□□□ -0.55
APTX-216ENST00000472896 LDLRAD1Q5T700 205 aa11.64□□□□□ -0.55
APTX-216ENST00000472896 JAKMIP3Q5VZ66 844 aa11.64□□□□□ -0.55
APTX-216ENST00000472896 SPRYD7Q5W111 196 aa11.64□□□□□ -0.55
APTX-216ENST00000472896 LARP1BQ659C4 914 aaKnown RBP11.64□□□□□ -0.55
APTX-216ENST00000472896 OTOP1Q7RTM1 612 aa11.64□□□□□ -0.55
APTX-216ENST00000472896 TRMT1Q9NXH9 659 aaKnown RBP11.64□□□□□ -0.55
APTX-216ENST00000472896 TRIM17Q9Y577 477 aa11.64□□□□□ -0.55
APTX-216ENST00000472896 TTC41PQ6P2S7 1318 aa11.63□□□□□ -0.55
APTX-216ENST00000472896 WNT10BO00744 389 aa11.63□□□□□ -0.55
APTX-216ENST00000472896 RAB11FIP3O75154 756 aa11.63□□□□□ -0.55
APTX-216ENST00000472896 CAP1Q01518 475 aa11.63□□□□□ -0.55
APTX-216ENST00000472896 SMC1AQ14683 1233 aaKnown RBP11.63□□□□□ -0.55
APTX-216ENST00000472896 TTC31Q49AM3 519 aaPredicted RBP11.63□□□□□ -0.55
APTX-216ENST00000472896 SAMD1Q6SPF0 538 aaPredicted RBP11.63□□□□□ -0.55
APTX-216ENST00000472896 MSL3Q8N5Y2 521 aaKnown RBP11.63□□□□□ -0.55
APTX-216ENST00000472896 ZBTB38Q8NAP3 1195 aaPredicted RBP11.63□□□□□ -0.55
APTX-216ENST00000472896 MNS1Q8NEH6 495 aa11.63□□□□□ -0.55
APTX-216ENST00000472896 LEO1Q8WVC0 666 aaPredicted RBP11.63□□□□□ -0.55
APTX-216ENST00000472896 RUFY2Q8WXA3 655 aa11.63□□□□□ -0.55
APTX-216ENST00000472896 PPP1R13BQ96KQ4 1090 aa11.63□□□□□ -0.55
APTX-216ENST00000472896 ZSWIM6Q9HCJ5 1215 aa11.63□□□□□ -0.55
APTX-216ENST00000472896 U3KPZ7 1027 aaPredicted RBP11.63□□□□□ -0.55
APTX-216ENST00000472896 PSME4Q14997 1843 aa11.62□□□□□ -0.55
APTX-216ENST00000472896 BECN2A8MW95 431 aa11.62□□□□□ -0.55
APTX-216ENST00000472896 PSEN1P49768 467 aa11.62□□□□□ -0.55
APTX-216ENST00000472896 SREBF2Q12772 1141 aa11.62□□□□□ -0.55
APTX-216ENST00000472896 DACT2Q5SW24 774 aa11.62□□□□□ -0.55
APTX-216ENST00000472896 HDGFL1Q5TGJ6 251 aa11.62□□□□□ -0.55
APTX-216ENST00000472896 LEKR1Q6ZMV7 388 aa11.62□□□□□ -0.55
APTX-216ENST00000472896 PODNQ7Z5L7 613 aa11.62□□□□□ -0.55
APTX-216ENST00000472896 GPR161Q8N6U8 529 aaKnown RBP11.62□□□□□ -0.55
APTX-216ENST00000472896 NAT10Q9H0A0 1025 aaKnown RBP11.62□□□□□ -0.55
APTX-216ENST00000472896 ANO10Q9NW15 660 aa11.62□□□□□ -0.55
APTX-216ENST00000472896 DNAI1Q9UI46 699 aa11.62□□□□□ -0.55
APTX-216ENST00000472896 CYP46A1Q9Y6A2 500 aa11.62□□□□□ -0.55
APTX-216ENST00000472896 TADA3O75528 432 aa11.62□□□□□ -0.55
APTX-216ENST00000472896 SASH1O94885 1247 aa11.62□□□□□ -0.55
APTX-216ENST00000472896 ATP2B4P23634 1241 aa11.62□□□□□ -0.55
APTX-216ENST00000472896 ETF1P62495 437 aaKnown RBP11.62□□□□□ -0.55
APTX-216ENST00000472896 LRRFIP1Q32MZ4 808 aaKnown RBP11.62□□□□□ -0.55
APTX-216ENST00000472896 E4F1Q66K89 784 aaPredicted RBP11.62□□□□□ -0.55
APTX-216ENST00000472896 IFNL1Q8IU54 200 aa11.62□□□□□ -0.55
APTX-216ENST00000472896 BICD2Q8TD16 824 aa11.62□□□□□ -0.55
APTX-216ENST00000472896 ALDH8A1Q9H2A2 487 aaPredicted RBP11.62□□□□□ -0.55
APTX-216ENST00000472896 DBF4Q9UBU7 674 aaPredicted RBP11.62□□□□□ -0.55
APTX-216ENST00000472896 JRKLQ9Y4A0 524 aa11.62□□□□□ -0.55
APTX-216ENST00000472896 ANKRD1Q15327 319 aa11.61□□□□□ -0.55
APTX-216ENST00000472896 CC2D1AQ6P1N0 951 aaPredicted RBP11.61□□□□□ -0.55
APTX-216ENST00000472896 ARMC9Q7Z3E5 817 aa11.61□□□□□ -0.55
APTX-216ENST00000472896 SUGP1Q8IWZ8 645 aaKnown RBP11.61□□□□□ -0.55
APTX-216ENST00000472896 REXO1L1PQ8IX06 675 aa11.61□□□□□ -0.55
APTX-216ENST00000472896 DEF6Q9H4E7 631 aa11.61□□□□□ -0.55
APTX-216ENST00000472896 ANGEL1Q9UNK9 670 aaKnown RBP11.61□□□□□ -0.55
APTX-216ENST00000472896 EXOC6BQ9Y2D4 811 aa11.61□□□□□ -0.55
APTX-216ENST00000472896 XDHP47989 1333 aa11.61□□□□□ -0.55
APTX-216ENST00000472896 KIAA0100Q14667 2235 aaKnown RBP11.6□□□□□ -0.55
APTX-216ENST00000472896 IGF2BP3O00425 579 aaKnown RBP eCLIP11.6□□□□□ -0.55
APTX-216ENST00000472896 TRIM66O15016 1216 aa11.6□□□□□ -0.55
APTX-216ENST00000472896 LARGE1O95461 756 aa11.6□□□□□ -0.55
APTX-216ENST00000472896 NF2P35240 595 aa11.6□□□□□ -0.55
APTX-216ENST00000472896 ARID5BQ14865 1188 aa11.6□□□□□ -0.55
APTX-216ENST00000472896 CCDC152Q4G0S7 254 aa11.6□□□□□ -0.55
APTX-216ENST00000472896 TXNRD3Q86VQ6 643 aa11.6□□□□□ -0.55
APTX-216ENST00000472896 FCHSD1Q86WN1 690 aa11.6□□□□□ -0.55
APTX-216ENST00000472896 RASEFQ8IZ41 740 aa11.6□□□□□ -0.55
APTX-216ENST00000472896 PPM1EQ8WY54 764 aa11.6□□□□□ -0.55
APTX-216ENST00000472896 ZBED3Q96IU2 234 aaPredicted RBP11.6□□□□□ -0.55
APTX-216ENST00000472896 CLMNQ96JQ2 1002 aa11.6□□□□□ -0.55
APTX-216ENST00000472896 ARFGAP3Q9NP61 516 aa11.6□□□□□ -0.55
APTX-216ENST00000472896 COLQQ9Y215 455 aaPredicted RBP11.6□□□□□ -0.55
APTX-216ENST00000472896 PTPN22Q9Y2R2 807 aa11.6□□□□□ -0.55
APTX-216ENST00000472896 PDE8AO60658 829 aa11.59□□□□□ -0.55
APTX-216ENST00000472896 NR1I2O75469 434 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms