RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 ZNF333Q96JL9 665 aa25.37■■□□□ 1.65
SREBF1-210ENST00000471445 CRNKL1Q9BZJ0 848 aaKnown RBP25.37■■□□□ 1.65
SREBF1-210ENST00000471445 SERPINB13Q9UIV8 391 aa25.37■■□□□ 1.65
SREBF1-210ENST00000471445 PNMA3Q9UL41 463 aa25.37■■□□□ 1.65
SREBF1-210ENST00000471445 SLC9C1Q4G0N8 1177 aa25.36■■□□□ 1.65
SREBF1-210ENST00000471445 TTC6Q86TZ1 520 aa25.36■■□□□ 1.65
SREBF1-210ENST00000471445 SMCR8Q8TEV9 937 aaPredicted RBP25.36■■□□□ 1.65
SREBF1-210ENST00000471445 SRRDQ9UH36 339 aa25.36■■□□□ 1.65
SREBF1-210ENST00000471445 PCDHB15Q9Y5E8 787 aa25.36■■□□□ 1.65
SREBF1-210ENST00000471445 KIAA0100Q14667 2235 aaKnown RBP25.36■■□□□ 1.65
SREBF1-210ENST00000471445 OSBPP22059 807 aa25.35■■□□□ 1.65
SREBF1-210ENST00000471445 MTMR2Q13614 643 aa25.35■■□□□ 1.65
SREBF1-210ENST00000471445 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.35■■□□□ 1.657e-9■■■□□ 15
SREBF1-210ENST00000471445 ECHDC1Q9NTX5 307 aa25.35■■□□□ 1.65
SREBF1-210ENST00000471445 ECM2O94769 699 aaPredicted RBP25.34■■□□□ 1.65
SREBF1-210ENST00000471445 BACE1P56817 501 aa25.34■■□□□ 1.65
SREBF1-210ENST00000471445 DOCK3Q8IZD9 2030 aa25.34■■□□□ 1.65
SREBF1-210ENST00000471445 POTEFA5A3E0 1075 aa25.33■■□□□ 1.65
SREBF1-210ENST00000471445 PLCD1P51178 756 aa25.33■■□□□ 1.65
SREBF1-210ENST00000471445 FCGRTP55899 365 aa25.33■■□□□ 1.65
SREBF1-210ENST00000471445 PABPC4Q13310 644 aaKnown RBP eCLIP25.33■■□□□ 1.65
SREBF1-210ENST00000471445 SLFNL1Q499Z3 407 aa25.33■■□□□ 1.65
SREBF1-210ENST00000471445 SDR42E1Q8WUS8 393 aa25.33■■□□□ 1.65
SREBF1-210ENST00000471445 YTHDC1Q96MU7 727 aaKnown RBP25.33■■□□□ 1.65
SREBF1-210ENST00000471445 MYPNQ86TC9 1320 aa25.33■■□□□ 1.64
SREBF1-210ENST00000471445 FMNL1O95466 1100 aaPredicted RBP25.32■■□□□ 1.64
SREBF1-210ENST00000471445 GH2P01242 217 aa25.32■■□□□ 1.64
SREBF1-210ENST00000471445 HOXD10P28358 340 aa25.32■■□□□ 1.64
SREBF1-210ENST00000471445 GABPAQ06546 454 aa25.32■■□□□ 1.64
SREBF1-210ENST00000471445 UBE3CQ15386 1083 aa25.32■■□□□ 1.64
SREBF1-210ENST00000471445 ARMT1Q9H993 441 aa25.32■■□□□ 1.64
SREBF1-210ENST00000471445 DCP1AQ9NPI6 582 aaPredicted RBP25.32■■□□□ 1.64
SREBF1-210ENST00000471445 C19orf81C9J6K1 198 aa25.31■■□□□ 1.64
SREBF1-210ENST00000471445 MBD4O95243 580 aa25.31■■□□□ 1.64
SREBF1-210ENST00000471445 CHGBP05060 677 aa25.31■■□□□ 1.64
SREBF1-210ENST00000471445 POLR3DP05423 398 aaPredicted RBP25.31■■□□□ 1.64
SREBF1-210ENST00000471445 SHMT1P34896 483 aa25.31■■□□□ 1.64
SREBF1-210ENST00000471445 FAM110CQ1W6H9 321 aa25.31■■□□□ 1.64
SREBF1-210ENST00000471445 NBPF11Q86T75 865 aa25.31■■□□□ 1.64
SREBF1-210ENST00000471445 MCM9Q9NXL9 1143 aa25.31■■□□□ 1.64
SREBF1-210ENST00000471445 PCDH10Q9P2E7 1040 aa25.31■■□□□ 1.64
SREBF1-210ENST00000471445 PDE4DIPQ5VU43 2346 aa25.3■■□□□ 1.64
SREBF1-210ENST00000471445 USP17L10C9JJH3 530 aa25.3■■□□□ 1.64
SREBF1-210ENST00000471445 EVX2Q03828 476 aa25.3■■□□□ 1.64
SREBF1-210ENST00000471445 ANKRD13CQ8N6S4 541 aa25.3■■□□□ 1.64
SREBF1-210ENST00000471445 SH3TC2Q8TF17 1288 aa25.3■■□□□ 1.64
SREBF1-210ENST00000471445 ASCC2Q9H1I8 757 aaPredicted RBP25.3■■□□□ 1.64
SREBF1-210ENST00000471445 TMOD4Q9NZQ9 345 aa25.3■■□□□ 1.64
SREBF1-210ENST00000471445 CENPFP49454 3210 aa25.3■■□□□ 1.64
SREBF1-210ENST00000471445 GCLCP48506 637 aaPredicted RBP25.29■■□□□ 1.64
SREBF1-210ENST00000471445 PRKCZQ05513 592 aa25.29■■□□□ 1.64
SREBF1-210ENST00000471445 GPATCH3Q96I76 525 aa25.29■■□□□ 1.64
SREBF1-210ENST00000471445 CRBNQ96SW2 442 aa25.29■■□□□ 1.64
SREBF1-210ENST00000471445 HOXA7P31268 230 aaPredicted RBP25.28■■□□□ 1.64
SREBF1-210ENST00000471445 CERKLQ49MI3 558 aaPredicted RBP25.28■■□□□ 1.64
SREBF1-210ENST00000471445 ZSCAN25Q6NSZ9 544 aa25.28■■□□□ 1.64
SREBF1-210ENST00000471445 RAET1EQ8TD07 263 aa25.28■■□□□ 1.64
SREBF1-210ENST00000471445 PRKAB2O43741 272 aa25.27■■□□□ 1.64
SREBF1-210ENST00000471445 ABCB5Q2M3G0 1257 aa25.27■■□□□ 1.64
SREBF1-210ENST00000471445 TSHZ3Q63HK5 1081 aa25.27■■□□□ 1.64
SREBF1-210ENST00000471445 C12orf42Q96LP6 360 aa25.27■■□□□ 1.64
SREBF1-210ENST00000471445 ATP8A2Q9NTI2 1148 aa25.27■■□□□ 1.64
SREBF1-210ENST00000471445 PLXNB2O15031 1838 aa25.26■■□□□ 1.63
SREBF1-210ENST00000471445 CYP2D6P10635 497 aa25.26■■□□□ 1.63
SREBF1-210ENST00000471445 IRX3P78415 501 aaPredicted RBP25.26■■□□□ 1.63
SREBF1-210ENST00000471445 KBTBD3Q8NAB2 608 aa25.26■■□□□ 1.63
SREBF1-210ENST00000471445 TMEM106CQ9BVX2 250 aa25.26■■□□□ 1.63
SREBF1-210ENST00000471445 EMILIN3Q9NT22 766 aa25.26■■□□□ 1.63
SREBF1-210ENST00000471445 TAOK2Q9UL54 1235 aa25.26■■□□□ 1.63
SREBF1-210ENST00000471445 GABRQQ9UN88 632 aa25.26■■□□□ 1.63
SREBF1-210ENST00000471445 BRCA2P51587 3418 aa25.25■■□□□ 1.63
SREBF1-210ENST00000471445 TNPO2O14787 897 aaKnown RBP25.25■■□□□ 1.63
SREBF1-210ENST00000471445 GRK4P32298 578 aa25.25■■□□□ 1.63
SREBF1-210ENST00000471445 USP17L2Q6R6M4 530 aa25.25■■□□□ 1.63
SREBF1-210ENST00000471445 PUS7LQ9H0K6 701 aaKnown RBP25.25■■□□□ 1.63
SREBF1-210ENST00000471445 TTC41PQ6P2S7 1318 aa25.25■■□□□ 1.63
SREBF1-210ENST00000471445 GUCY1A2P33402 732 aa25.24■■□□□ 1.63
SREBF1-210ENST00000471445 RAB3GAP1Q15042 981 aa25.24■■□□□ 1.63
SREBF1-210ENST00000471445 FEZ1Q99689 392 aa25.24■■□□□ 1.63
SREBF1-210ENST00000471445 CABP5Q9NP86 173 aa25.24■■□□□ 1.63
SREBF1-210ENST00000471445 MORF4L1Q9UBU8 362 aa25.24■■□□□ 1.63
SREBF1-210ENST00000471445 SWAP70Q9UH65 585 aa25.24■■□□□ 1.63
SREBF1-210ENST00000471445 TNRC18O15417 2968 aaPredicted RBP25.24■■□□□ 1.63
SREBF1-210ENST00000471445 SLC44A5Q8NCS7 719 aa25.23■■□□□ 1.63
SREBF1-210ENST00000471445 SLAIN1Q8ND83 568 aa25.23■■□□□ 1.63
SREBF1-210ENST00000471445 KIAA1683Q9H0B3 1180 aa25.23■■□□□ 1.63
SREBF1-210ENST00000471445 GREB1LQ9C091 1923 aaPredicted RBP25.22■■□□□ 1.63
SREBF1-210ENST00000471445 EN2P19622 333 aaPredicted RBP25.22■■□□□ 1.63
SREBF1-210ENST00000471445 FLT3LGP49771 235 aa25.22■■□□□ 1.63
SREBF1-210ENST00000471445 HERVK_113P62684 666 aa25.22■■□□□ 1.63
SREBF1-210ENST00000471445 PI4K2BQ8TCG2 481 aa25.22■■□□□ 1.63
SREBF1-210ENST00000471445 P2RX7Q99572 595 aaKnown RBP25.22■■□□□ 1.63
SREBF1-210ENST00000471445 SALL3Q9BXA9 1300 aa25.21■■□□□ 1.63
SREBF1-210ENST00000471445 USP14P54578 494 aa25.21■■□□□ 1.63
SREBF1-210ENST00000471445 IRF5Q13568 498 aa25.21■■□□□ 1.63
SREBF1-210ENST00000471445 SEPT2Q15019 361 aa25.21■■□□□ 1.63
SREBF1-210ENST00000471445 ZYXQ15942 572 aaKnown RBP25.21■■□□□ 1.63
SREBF1-210ENST00000471445 C12orf60Q5U649 245 aa25.21■■□□□ 1.63
SREBF1-210ENST00000471445 ACER1Q8TDN7 264 aa25.21■■□□□ 1.63
SREBF1-210ENST00000471445 OTUD7AQ8TE49 926 aaPredicted RBP25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms