RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 APPP05067 770 aa23.64■■□□□ 1.37
HDAC7-220ENST00000471235 SBK1Q52WX2 424 aa23.64■■□□□ 1.37
HDAC7-220ENST00000471235 VPS53Q5VIR6 699 aa23.64■■□□□ 1.37
HDAC7-220ENST00000471235 IFNL3Q8IZI9 196 aa23.64■■□□□ 1.37
HDAC7-220ENST00000471235 SLC44A5Q8NCS7 719 aa23.64■■□□□ 1.37
HDAC7-220ENST00000471235 DYNLL2Q96FJ2 89 aa23.64■■□□□ 1.37
HDAC7-220ENST00000471235 KCNH4Q9UQ05 1017 aa23.64■■□□□ 1.37
HDAC7-220ENST00000471235 MYH4Q9Y623 1939 aa23.64■■□□□ 1.37
HDAC7-220ENST00000471235 GTF2A2P52657 109 aa23.63■■□□□ 1.37
HDAC7-220ENST00000471235 BEGAINQ9BUH8 593 aa23.63■■□□□ 1.37
HDAC7-220ENST00000471235 ZBTB21Q9ULJ3 1066 aa23.63■■□□□ 1.37
HDAC7-220ENST00000471235 CASP8AP2Q9UKL3 1982 aa23.63■■□□□ 1.37
HDAC7-220ENST00000471235 CCL15-CCL14A0A0B4J2E2 113 aa23.62■■□□□ 1.37
HDAC7-220ENST00000471235 TESPA1A2RU30 521 aaPredicted RBP23.62■■□□□ 1.37
HDAC7-220ENST00000471235 IGF2BP3O00425 579 aaKnown RBP eCLIP23.62■■□□□ 1.37
HDAC7-220ENST00000471235 CCL15Q16663 113 aa23.62■■□□□ 1.37
HDAC7-220ENST00000471235 CWC27Q6UX04 472 aaKnown RBP23.62■■□□□ 1.37
HDAC7-220ENST00000471235 BRI3BPQ8WY22 251 aa23.62■■□□□ 1.37
HDAC7-220ENST00000471235 NACAP1Q9BZK3 213 aa23.62■■□□□ 1.37
HDAC7-220ENST00000471235 SWAP70Q9UH65 585 aa23.62■■□□□ 1.37
HDAC7-220ENST00000471235 TAOK2Q9UL54 1235 aa23.62■■□□□ 1.37
HDAC7-220ENST00000471235 ZHX2Q9Y6X8 837 aa23.62■■□□□ 1.37
HDAC7-220ENST00000471235 ASNSP08243 561 aa23.61■■□□□ 1.37
HDAC7-220ENST00000471235 SNAPC2Q13487 334 aa23.61■■□□□ 1.37
HDAC7-220ENST00000471235 C16orf86Q6ZW13 317 aa23.61■■□□□ 1.37
HDAC7-220ENST00000471235 IFNL1Q8IU54 200 aa23.61■■□□□ 1.37
HDAC7-220ENST00000471235 NAPBQ9H115 298 aa23.61■■□□□ 1.37
HDAC7-220ENST00000471235 GINM1Q9NU53 330 aa23.61■■□□□ 1.37
HDAC7-220ENST00000471235 RNF186Q9NXI6 227 aa23.61■■□□□ 1.37
HDAC7-220ENST00000471235 SAGE1Q9NXZ1 904 aa23.61■■□□□ 1.37
HDAC7-220ENST00000471235 AFG3L2Q9Y4W6 797 aa23.61■■□□□ 1.37
HDAC7-220ENST00000471235 MINDY4BA8MYZ0 360 aa23.6■■□□□ 1.37
HDAC7-220ENST00000471235 CA12O43570 354 aa23.6■■□□□ 1.37
HDAC7-220ENST00000471235 CETPP11597 493 aa23.6■■□□□ 1.37
HDAC7-220ENST00000471235 INHBEP58166 350 aa23.6■■□□□ 1.37
HDAC7-220ENST00000471235 CERKLQ49MI3 558 aaPredicted RBP23.6■■□□□ 1.37
HDAC7-220ENST00000471235 PTPN18Q99952 460 aa23.6■■□□□ 1.37
HDAC7-220ENST00000471235 TSKSQ9UJT2 592 aa23.6■■□□□ 1.37
HDAC7-220ENST00000471235 USP17L5A8MUK1 530 aa23.59■■□□□ 1.37
HDAC7-220ENST00000471235 GH2P01242 217 aa23.59■■□□□ 1.37
HDAC7-220ENST00000471235 HSPA8P11142 646 aaKnown RBP23.59■■□□□ 1.37
HDAC7-220ENST00000471235 CDK8P49336 464 aa23.59■■□□□ 1.37
HDAC7-220ENST00000471235 CXCL11O14625 94 aa23.58■■□□□ 1.37
HDAC7-220ENST00000471235 TRPA1O75762 1119 aa23.58■■□□□ 1.37
HDAC7-220ENST00000471235 HSPD1P10809 573 aaKnown RBP23.58■■□□□ 1.37
HDAC7-220ENST00000471235 CHMLP26374 656 aa23.58■■□□□ 1.37
HDAC7-220ENST00000471235 MFAP1P55081 439 aaKnown RBP23.58■■□□□ 1.37
HDAC7-220ENST00000471235 MOGSQ13724 837 aa23.58■■□□□ 1.37
HDAC7-220ENST00000471235 ABCB5Q2M3G0 1257 aa23.58■■□□□ 1.37
HDAC7-220ENST00000471235 TBC1D2Q9BYX2 928 aa23.58■■□□□ 1.37
HDAC7-220ENST00000471235 IL25Q9H293 177 aa23.58■■□□□ 1.37
HDAC7-220ENST00000471235 ZMYM6O95789 1325 aa23.58■■□□□ 1.36
HDAC7-220ENST00000471235 RAD50Q92878 1312 aa23.58■■□□□ 1.36
HDAC7-220ENST00000471235 A0A0G2JLL6 359 aaPredicted RBP23.57■■□□□ 1.36
HDAC7-220ENST00000471235 TRIM75PA6NK02 468 aa23.57■■□□□ 1.36
HDAC7-220ENST00000471235 CTCFP49711 727 aaPredicted RBP23.57■■□□□ 1.36
HDAC7-220ENST00000471235 ALX1Q15699 326 aa23.57■■□□□ 1.36
HDAC7-220ENST00000471235 BMP2KLQ5H9B9 411 aa23.57■■□□□ 1.36
HDAC7-220ENST00000471235 PRRT2Q7Z6L0 340 aaPredicted RBP23.57■■□□□ 1.36
HDAC7-220ENST00000471235 AS3MTQ9HBK9 375 aa23.57■■□□□ 1.36
HDAC7-220ENST00000471235 AKR1B1P15121 316 aa23.56■■□□□ 1.36
HDAC7-220ENST00000471235 GUCY1A2P33402 732 aa23.56■■□□□ 1.36
HDAC7-220ENST00000471235 PPARAQ07869 468 aa23.56■■□□□ 1.36
HDAC7-220ENST00000471235 STK11IPQ8N1F8 1099 aa23.56■■□□□ 1.36
HDAC7-220ENST00000471235 FAM43AQ8N2R8 423 aa23.56■■□□□ 1.36
HDAC7-220ENST00000471235 ZNF280CQ8ND82 737 aa23.56■■□□□ 1.36
HDAC7-220ENST00000471235 WDR18Q9BV38 432 aa23.56■■□□□ 1.36
HDAC7-220ENST00000471235 PARP14Q460N5 1801 aa23.56■■□□□ 1.36
HDAC7-220ENST00000471235 BTBD19C9JJ37 291 aa23.55■■□□□ 1.36
HDAC7-220ENST00000471235 SPP2Q13103 211 aa23.55■■□□□ 1.36
HDAC7-220ENST00000471235 CABP5Q9NP86 173 aa23.55■■□□□ 1.36
HDAC7-220ENST00000471235 MPHOSPH10O00566 681 aaKnown RBP23.54■■□□□ 1.36
HDAC7-220ENST00000471235 ALDH1A1P00352 501 aa23.54■■□□□ 1.36
HDAC7-220ENST00000471235 SEPT2Q15019 361 aa23.54■■□□□ 1.36
HDAC7-220ENST00000471235 RAB3GAP1Q15042 981 aa23.54■■□□□ 1.36
HDAC7-220ENST00000471235 OTUD7BQ6GQQ9 843 aa23.54■■□□□ 1.36
HDAC7-220ENST00000471235 FGAP02671 866 aa23.53■■□□□ 1.36
HDAC7-220ENST00000471235 RASA1P20936 1047 aa23.53■■□□□ 1.36
HDAC7-220ENST00000471235 LBX1P52954 281 aa23.53■■□□□ 1.36
HDAC7-220ENST00000471235 GADL1Q6ZQY3 521 aa23.53■■□□□ 1.36
HDAC7-220ENST00000471235 TMEM179Q6ZVK1 233 aa23.53■■□□□ 1.36
HDAC7-220ENST00000471235 RUFY2Q8WXA3 655 aa23.53■■□□□ 1.36
HDAC7-220ENST00000471235 CCDC17Q96LX7 622 aa23.53■■□□□ 1.36
HDAC7-220ENST00000471235 CFHR5Q9BXR6 569 aa23.53■■□□□ 1.36
HDAC7-220ENST00000471235 ZSWIM8A7E2V4 1837 aa23.53■■□□□ 1.36
HDAC7-220ENST00000471235 MGAMO43451 1857 aa23.53■■□□□ 1.36
HDAC7-220ENST00000471235 TBC1D8O95759 1140 aa23.52■■□□□ 1.36
HDAC7-220ENST00000471235 DGKZQ13574 1117 aa23.52■■□□□ 1.36
HDAC7-220ENST00000471235 MTMR2Q13614 643 aa23.52■■□□□ 1.36
HDAC7-220ENST00000471235 ANKRD23Q86SG2 305 aa23.52■■□□□ 1.36
HDAC7-220ENST00000471235 ZCCHC17Q9NP64 241 aaKnown RBP23.52■■□□□ 1.36
HDAC7-220ENST00000471235 HMGCS2P54868 508 aa23.51■■□□□ 1.35
HDAC7-220ENST00000471235 CTDSPL2Q05D32 466 aa23.51■■□□□ 1.35
HDAC7-220ENST00000471235 SH3D19Q5HYK7 790 aa23.51■■□□□ 1.35
HDAC7-220ENST00000471235 GPAT2Q6NUI2 795 aa23.51■■□□□ 1.35
HDAC7-220ENST00000471235 FASTKD5Q7L8L6 764 aaKnown RBP23.51■■□□□ 1.35
HDAC7-220ENST00000471235 CLEC10AQ8IUN9 316 aa23.51■■□□□ 1.35
HDAC7-220ENST00000471235 DSCC1Q9BVC3 393 aa23.51■■□□□ 1.35
HDAC7-220ENST00000471235 R3HDMLQ9H3Y0 253 aa23.51■■□□□ 1.35
HDAC7-220ENST00000471235 MKNK2Q9HBH9 465 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms