RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 BACE1P56817 501 aa8.44□□□□□ -1.06
SF3A3-205ENST00000470585 RHBDL3P58872 404 aa8.44□□□□□ -1.06
SF3A3-205ENST00000470585 CCNA1P78396 465 aa8.44□□□□□ -1.06
SF3A3-205ENST00000470585 SPP2Q13103 211 aa8.44□□□□□ -1.06
SF3A3-205ENST00000470585 MORN1Q5T089 497 aa8.44□□□□□ -1.06
SF3A3-205ENST00000470585 METTL16Q86W50 562 aaKnown RBP8.44□□□□□ -1.06
SF3A3-205ENST00000470585 TMOD4Q9NZQ9 345 aa8.44□□□□□ -1.06
SF3A3-205ENST00000470585 PI4KBQ9UBF8 816 aa8.44□□□□□ -1.06
SF3A3-205ENST00000470585 ATAD5Q96QE3 1844 aa8.44□□□□□ -1.06
SF3A3-205ENST00000470585 DNAH12Q6ZR08 3092 aa8.43□□□□□ -1.06
SF3A3-205ENST00000470585 BDP1A6H8Y1 2624 aa8.43□□□□□ -1.06
SF3A3-205ENST00000470585 DNM1LO00429 736 aa8.43□□□□□ -1.06
SF3A3-205ENST00000470585 PLCG2P16885 1265 aa8.43□□□□□ -1.06
SF3A3-205ENST00000470585 BTDP43251 543 aa8.43□□□□□ -1.06
SF3A3-205ENST00000470585 HERVK_113P62684 666 aa8.43□□□□□ -1.06
SF3A3-205ENST00000470585 CACNB2Q08289 660 aaPredicted RBP8.43□□□□□ -1.06
SF3A3-205ENST00000470585 MVPQ14764 893 aaKnown RBP8.43□□□□□ -1.06
SF3A3-205ENST00000470585 LRRC26Q2I0M4 334 aa8.43□□□□□ -1.06
SF3A3-205ENST00000470585 C1orf53Q5VUE5 145 aa8.43□□□□□ -1.06
SF3A3-205ENST00000470585 MFSD14CQ5VZR4 134 aa8.43□□□□□ -1.06
SF3A3-205ENST00000470585 CCDC102BQ68D86 513 aa8.43□□□□□ -1.06
SF3A3-205ENST00000470585 TMED8Q6PL24 325 aaPredicted RBP8.43□□□□□ -1.06
SF3A3-205ENST00000470585 LBX2Q6XYB7 198 aa8.43□□□□□ -1.06
SF3A3-205ENST00000470585 MAFAQ8NHW3 353 aaPredicted RBP8.43□□□□□ -1.06
SF3A3-205ENST00000470585 LPAR1Q92633 364 aa8.43□□□□□ -1.06
SF3A3-205ENST00000470585 DDX4Q9NQI0 724 aaKnown RBP8.43□□□□□ -1.06
SF3A3-205ENST00000470585 AKAP2Q9Y2D5 859 aa8.43□□□□□ -1.06
SF3A3-205ENST00000470585 RABGAP1Q9Y3P9 1069 aa8.43□□□□□ -1.06
SF3A3-205ENST00000470585 PRUNE2Q8WUY3 3088 aa8.43□□□□□ -1.06
SF3A3-205ENST00000470585 FRMPD3Q5JV73 1810 aa8.43□□□□□ -1.06
SF3A3-205ENST00000470585 SLC15A5A6NIM6 579 aa8.42□□□□□ -1.06
SF3A3-205ENST00000470585 USP17L10C9JJH3 530 aa8.42□□□□□ -1.06
SF3A3-205ENST00000470585 CYP2B6P20813 491 aa8.42□□□□□ -1.06
SF3A3-205ENST00000470585 PHKA1P46020 1223 aa8.42□□□□□ -1.06
SF3A3-205ENST00000470585 ERVK-9P63128 1117 aa8.42□□□□□ -1.06
SF3A3-205ENST00000470585 ERVK-24P63145 666 aa8.42□□□□□ -1.06
SF3A3-205ENST00000470585 MAP2K5Q13163 448 aa8.42□□□□□ -1.06
SF3A3-205ENST00000470585 RASGRF1Q13972 1273 aa8.42□□□□□ -1.06
SF3A3-205ENST00000470585 ATF7IPQ6VMQ6 1270 aa8.42□□□□□ -1.06
SF3A3-205ENST00000470585 ERICH6Q7L0X2 663 aa8.42□□□□□ -1.06
SF3A3-205ENST00000470585 GPR142Q7Z601 462 aa8.42□□□□□ -1.06
SF3A3-205ENST00000470585 PLEKHH3Q7Z736 793 aa8.42□□□□□ -1.06
SF3A3-205ENST00000470585 CERS3Q8IU89 383 aa8.42□□□□□ -1.06
SF3A3-205ENST00000470585 FOXP4Q8IVH2 680 aaPredicted RBP8.42□□□□□ -1.06
SF3A3-205ENST00000470585 CCAR1Q8IX12 1150 aaKnown RBP8.42□□□□□ -1.06
SF3A3-205ENST00000470585 ARRDC4Q8NCT1 418 aa8.42□□□□□ -1.06
SF3A3-205ENST00000470585 KLHDC4Q8TBB5 520 aa8.42□□□□□ -1.06
SF3A3-205ENST00000470585 C12orf42Q96LP6 360 aa8.42□□□□□ -1.06
SF3A3-205ENST00000470585 COPRSQ9NQ92 184 aa8.42□□□□□ -1.06
SF3A3-205ENST00000470585 SPTBN5Q9NRC6 3674 aaKnown RBP8.41□□□□□ -1.06
SF3A3-205ENST00000470585 MUC3AQ02505 3323 aa8.41□□□□□ -1.06
SF3A3-205ENST00000470585 LTBP2Q14767 1821 aa8.41□□□□□ -1.06
SF3A3-205ENST00000470585 ZNF236Q9UL36 1845 aa8.41□□□□□ -1.06
SF3A3-205ENST00000470585 IGHA2P01877 340 aa8.41□□□□□ -1.06
SF3A3-205ENST00000470585 UBTFL1P0CB47 393 aaPredicted RBP8.41□□□□□ -1.06
SF3A3-205ENST00000470585 MDM2Q00987 491 aaPredicted RBP8.41□□□□□ -1.06
SF3A3-205ENST00000470585 TRIM32Q13049 653 aa8.41□□□□□ -1.06
SF3A3-205ENST00000470585 PICALMQ13492 652 aa8.41□□□□□ -1.06
SF3A3-205ENST00000470585 SNX17Q15036 470 aa8.41□□□□□ -1.06
SF3A3-205ENST00000470585 ALDH1L2Q3SY69 923 aa8.41□□□□□ -1.06
SF3A3-205ENST00000470585 POTEGQ6S5H5 508 aa8.41□□□□□ -1.06
SF3A3-205ENST00000470585 MRPL50Q8N5N7 158 aaKnown RBP8.41□□□□□ -1.06
SF3A3-205ENST00000470585 CDX2Q99626 313 aaPredicted RBP8.41□□□□□ -1.06
SF3A3-205ENST00000470585 SEMA6BQ9H3T3 888 aa8.41□□□□□ -1.06
SF3A3-205ENST00000470585 RBPJLQ9UBG7 517 aa8.41□□□□□ -1.06
SF3A3-205ENST00000470585 DDX20Q9UHI6 824 aaKnown RBP8.41□□□□□ -1.06
SF3A3-205ENST00000470585 RLFQ13129 1914 aa8.41□□□□□ -1.06
SF3A3-205ENST00000470585 STRNO43815 780 aa8.4□□□□□ -1.06
SF3A3-205ENST00000470585 BAG3O95817 575 aa8.4□□□□□ -1.06
SF3A3-205ENST00000470585 USP14P54578 494 aa8.4□□□□□ -1.06
SF3A3-205ENST00000470585 MECOMQ03112 1051 aa8.4□□□□□ -1.06
SF3A3-205ENST00000470585 MTMR2Q13614 643 aa8.4□□□□□ -1.06
SF3A3-205ENST00000470585 TJAP1Q5JTD0 557 aa8.4□□□□□ -1.06
SF3A3-205ENST00000470585 OLFML2BQ68BL8 750 aa8.4□□□□□ -1.06
SF3A3-205ENST00000470585 USP17L2Q6R6M4 530 aa8.4□□□□□ -1.06
SF3A3-205ENST00000470585 NSUN4Q96CB9 384 aaKnown RBP8.4□□□□□ -1.06
SF3A3-205ENST00000470585 EDC3Q96F86 508 aaKnown RBP8.4□□□□□ -1.06
SF3A3-205ENST00000470585 P2RX7Q99572 595 aaKnown RBP8.4□□□□□ -1.06
SF3A3-205ENST00000470585 NOL10Q9BSC4 688 aaKnown RBP8.4□□□□□ -1.06
SF3A3-205ENST00000470585 TXNRD2Q9NNW7 524 aa8.4□□□□□ -1.06
SF3A3-205ENST00000470585 ABCF2Q9UG63 623 aa8.4□□□□□ -1.06
SF3A3-205ENST00000470585 NRBP1Q9UHY1 535 aa8.4□□□□□ -1.06
SF3A3-205ENST00000470585 ARIH1Q9Y4X5 557 aaPredicted RBP8.4□□□□□ -1.06
SF3A3-205ENST00000470585 ZNF521Q96K83 1311 aa8.39□□□□□ -1.07
SF3A3-205ENST00000470585 CT47B1P0C2W7 299 aaPredicted RBP8.39□□□□□ -1.07
SF3A3-205ENST00000470585 ARID4AP29374 1257 aaPredicted RBP8.39□□□□□ -1.07
SF3A3-205ENST00000470585 CCND3P30281 292 aaPredicted RBP8.39□□□□□ -1.07
SF3A3-205ENST00000470585 RTP1P59025 263 aa8.39□□□□□ -1.07
SF3A3-205ENST00000470585 PPP4CP60510 307 aa8.39□□□□□ -1.07
SF3A3-205ENST00000470585 MTX1Q13505 466 aa8.39□□□□□ -1.07
SF3A3-205ENST00000470585 GRB14Q14449 540 aa8.39□□□□□ -1.07
SF3A3-205ENST00000470585 SENP6Q9GZR1 1112 aaPredicted RBP8.39□□□□□ -1.07
SF3A3-205ENST00000470585 SLC5A4Q9NY91 659 aa8.39□□□□□ -1.07
SF3A3-205ENST00000470585 IVNS1ABPQ9Y6Y0 642 aa8.39□□□□□ -1.07
SF3A3-205ENST00000470585 FOCADQ5VW36 1801 aa8.38□□□□□ -1.07
SF3A3-205ENST00000470585 MYO9BQ13459 2157 aa8.38□□□□□ -1.07
SF3A3-205ENST00000470585 ROBO3Q96MS0 1386 aa8.38□□□□□ -1.07
SF3A3-205ENST00000470585 EYSQ5T1H1 3165 aa8.38□□□□□ -1.07
SF3A3-205ENST00000470585 A0A1B0GUL7 405 aa8.38□□□□□ -1.07
SF3A3-205ENST00000470585 USP17L15C9J2P7 530 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms