RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 CUTAO60888 179 aa20.46■□□□□ 0.87
MCF2L-221ENST00000469415 USP17L8P0C7I0 530 aa20.46■□□□□ 0.87
MCF2L-221ENST00000469415 CATIPQ7Z7H3 387 aa20.46■□□□□ 0.87
MCF2L-221ENST00000469415 PDCL2Q8N4E4 241 aa20.46■□□□□ 0.87
MCF2L-221ENST00000469415 WASF1Q92558 559 aa20.46■□□□□ 0.87
MCF2L-221ENST00000469415 MCM9Q9NXL9 1143 aa20.46■□□□□ 0.87
MCF2L-221ENST00000469415 PPP6R2O75170 966 aa20.46■□□□□ 0.87
MCF2L-221ENST00000469415 DIXDC1Q155Q3 683 aa20.46■□□□□ 0.87
MCF2L-221ENST00000469415 CTR9Q6PD62 1173 aa20.46■□□□□ 0.87
MCF2L-221ENST00000469415 IQCA1Q86XH1 822 aa20.46■□□□□ 0.87
MCF2L-221ENST00000469415 DYNLL2Q96FJ2 89 aa20.46■□□□□ 0.87
MCF2L-221ENST00000469415 HPSEQ9Y251 543 aa20.46■□□□□ 0.87
MCF2L-221ENST00000469415 SMTNL1A8MU46 457 aa20.45■□□□□ 0.87
MCF2L-221ENST00000469415 CDC25BP30305 580 aa20.45■□□□□ 0.87
MCF2L-221ENST00000469415 ATRNO75882 1429 aa20.45■□□□□ 0.86
MCF2L-221ENST00000469415 CCDC196A0A1B0GTZ2 297 aa20.45■□□□□ 0.86
MCF2L-221ENST00000469415 TSPY2A6NKD2 308 aa20.45■□□□□ 0.86
MCF2L-221ENST00000469415 RBM6P78332 1123 aaKnown RBP20.45■□□□□ 0.86
MCF2L-221ENST00000469415 MYL5Q02045 173 aa20.45■□□□□ 0.86
MCF2L-221ENST00000469415 ABCA3Q99758 1704 aa20.45■□□□□ 0.86
MCF2L-221ENST00000469415 IGSF3O75054 1194 aa20.45■□□□□ 0.86
MCF2L-221ENST00000469415 HIBADHP31937 336 aaKnown RBP20.45■□□□□ 0.86
MCF2L-221ENST00000469415 FMR1Q06787 632 aaKnown RBP eCLIP20.45■□□□□ 0.86
MCF2L-221ENST00000469415 SYT10Q6XYQ8 523 aa20.45■□□□□ 0.86
MCF2L-221ENST00000469415 RASGRP4Q8TDF6 673 aa20.45■□□□□ 0.86
MCF2L-221ENST00000469415 CPLX3Q8WVH0 158 aa20.45■□□□□ 0.86
MCF2L-221ENST00000469415 CPVLQ9H3G5 476 aa20.45■□□□□ 0.86
MCF2L-221ENST00000469415 BSDC1Q9NW68 430 aaPredicted RBP20.45■□□□□ 0.86
MCF2L-221ENST00000469415 SPATA31A5Q5VU36 1347 aa20.45■□□□□ 0.86
MCF2L-221ENST00000469415 PNPLA7Q6ZV29 1317 aa20.45■□□□□ 0.86
MCF2L-221ENST00000469415 SPATA31A7Q8IWB4 1347 aa20.45■□□□□ 0.86
MCF2L-221ENST00000469415 MYH14Q7Z406 1995 aaKnown RBP20.44■□□□□ 0.86
MCF2L-221ENST00000469415 VWA3AA6NCI4 1184 aa20.44■□□□□ 0.86
MCF2L-221ENST00000469415 CCAR2Q8N163 923 aaKnown RBP20.44■□□□□ 0.86
MCF2L-221ENST00000469415 AK7Q96M32 723 aa20.44■□□□□ 0.86
MCF2L-221ENST00000469415 HSD3B7Q9H2F3 369 aa20.44■□□□□ 0.86
MCF2L-221ENST00000469415 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.44■□□□□ 0.86
MCF2L-221ENST00000469415 POSTNQ15063 836 aa20.44■□□□□ 0.86
MCF2L-221ENST00000469415 FBXO2Q9UK22 296 aaPredicted RBP20.44■□□□□ 0.86
MCF2L-221ENST00000469415 COL1A1P02452 1464 aaPredicted RBP20.44■□□□□ 0.86
MCF2L-221ENST00000469415 DZIP1Q86YF9 867 aaKnown RBP20.43■□□□□ 0.86
MCF2L-221ENST00000469415 GPKOWQ92917 476 aaPredicted RBP eCLIP20.43■□□□□ 0.86
MCF2L-221ENST00000469415 SAP30BPQ9UHR5 308 aaKnown RBP20.43■□□□□ 0.86
MCF2L-221ENST00000469415 ZNF215Q9UL58 517 aaPredicted RBP20.43■□□□□ 0.86
MCF2L-221ENST00000469415 NFE2L3Q9Y4A8 694 aa20.43■□□□□ 0.86
MCF2L-221ENST00000469415 SPEF2Q9C093 1822 aa20.43■□□□□ 0.86
MCF2L-221ENST00000469415 UBE4AQ14139 1066 aa20.43■□□□□ 0.86
MCF2L-221ENST00000469415 SEC23AQ15436 765 aa20.43■□□□□ 0.86
MCF2L-221ENST00000469415 RASGRP2Q7LDG7 609 aa20.43■□□□□ 0.86
MCF2L-221ENST00000469415 SLC44A5Q8NCS7 719 aa20.43■□□□□ 0.86
MCF2L-221ENST00000469415 PLIN2Q99541 437 aa20.43■□□□□ 0.86
MCF2L-221ENST00000469415 SAMSN1Q9NSI8 373 aaKnown RBP20.43■□□□□ 0.86
MCF2L-221ENST00000469415 MAN1B1Q9UKM7 699 aa20.43■□□□□ 0.86
MCF2L-221ENST00000469415 RILPL1Q5EBL4 403 aa20.43■□□□□ 0.86
MCF2L-221ENST00000469415 E4F1Q66K89 784 aaPredicted RBP20.43■□□□□ 0.86
MCF2L-221ENST00000469415 PIK3AP1Q6ZUJ8 805 aa20.43■□□□□ 0.86
MCF2L-221ENST00000469415 SMARCC1Q92922 1105 aaPredicted RBP20.43■□□□□ 0.86
MCF2L-221ENST00000469415 ZBTB9Q96C00 473 aa20.43■□□□□ 0.86
MCF2L-221ENST00000469415 CDCA7Q9BWT1 371 aaPredicted RBP20.43■□□□□ 0.86
MCF2L-221ENST00000469415 BLZF1Q9H2G9 400 aa20.43■□□□□ 0.86
MCF2L-221ENST00000469415 MAPK8IP1Q9UQF2 711 aa20.43■□□□□ 0.86
MCF2L-221ENST00000469415 MCM7P33993 719 aa20.42■□□□□ 0.86
MCF2L-221ENST00000469415 ADKP55263 362 aaKnown RBP20.42■□□□□ 0.86
MCF2L-221ENST00000469415 SMARCE1Q969G3 411 aa20.42■□□□□ 0.86
MCF2L-221ENST00000469415 NSUN4Q96CB9 384 aaKnown RBP20.42■□□□□ 0.86
MCF2L-221ENST00000469415 A0A087X0B3 334 aa20.42■□□□□ 0.86
MCF2L-221ENST00000469415 TRIM75PA6NK02 468 aa20.42■□□□□ 0.86
MCF2L-221ENST00000469415 GRIK5Q16478 980 aa20.42■□□□□ 0.86
MCF2L-221ENST00000469415 PKN1Q16512 942 aa20.42■□□□□ 0.86
MCF2L-221ENST00000469415 TMTC2Q8N394 836 aa20.42■□□□□ 0.86
MCF2L-221ENST00000469415 TOP1P11387 765 aaKnown RBP20.41■□□□□ 0.86
MCF2L-221ENST00000469415 NLRP5P59047 1200 aa20.41■□□□□ 0.86
MCF2L-221ENST00000469415 NCBP1Q09161 790 aaKnown RBP20.41■□□□□ 0.86
MCF2L-221ENST00000469415 TUBE1Q9UJT0 475 aa20.41■□□□□ 0.86
MCF2L-221ENST00000469415 CCNL1Q9UK58 526 aaPredicted RBP20.41■□□□□ 0.86
MCF2L-221ENST00000469415 ZHX1Q9UKY1 873 aaPredicted RBP20.41■□□□□ 0.86
MCF2L-221ENST00000469415 PTPREP23469 700 aa20.41■□□□□ 0.86
MCF2L-221ENST00000469415 NFIXQ14938 502 aa20.41■□□□□ 0.86
MCF2L-221ENST00000469415 SRBD1Q8N5C6 995 aaKnown RBP20.41■□□□□ 0.86
MCF2L-221ENST00000469415 DCP1AQ9NPI6 582 aaPredicted RBP20.41■□□□□ 0.86
MCF2L-221ENST00000469415 MYH7P12883 1935 aa20.41■□□□□ 0.86
MCF2L-221ENST00000469415 USP5P45974 858 aa20.4■□□□□ 0.86
MCF2L-221ENST00000469415 KLHL34Q8N239 644 aa20.4■□□□□ 0.86
MCF2L-221ENST00000469415 CTCFLQ8NI51 663 aaPredicted RBP20.4■□□□□ 0.86
MCF2L-221ENST00000469415 GOLGA8HP0CJ92 632 aa20.4■□□□□ 0.86
MCF2L-221ENST00000469415 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.4■□□□□ 0.86
MCF2L-221ENST00000469415 STX8Q9UNK0 236 aa20.4■□□□□ 0.86
MCF2L-221ENST00000469415 XBP1P17861 261 aa20.4■□□□□ 0.86
MCF2L-221ENST00000469415 KRT2P35908 639 aa20.4■□□□□ 0.86
MCF2L-221ENST00000469415 GSDMDP57764 484 aa20.4■□□□□ 0.86
MCF2L-221ENST00000469415 SYMPKQ92797 1274 aaKnown RBP20.4■□□□□ 0.86
MCF2L-221ENST00000469415 FOXP1Q9H334 677 aaPredicted RBP20.4■□□□□ 0.86
MCF2L-221ENST00000469415 MYH3P11055 1940 aa20.39■□□□□ 0.86
MCF2L-221ENST00000469415 USP17L3A6NCW0 530 aa20.39■□□□□ 0.85
MCF2L-221ENST00000469415 USP17L4A6NCW7 530 aa20.39■□□□□ 0.85
MCF2L-221ENST00000469415 USP17L1Q7RTZ2 530 aa20.39■□□□□ 0.85
MCF2L-221ENST00000469415 LRRN4CLQ8ND94 238 aa20.39■□□□□ 0.85
MCF2L-221ENST00000469415 MAP7D2Q96T17 732 aa20.39■□□□□ 0.85
MCF2L-221ENST00000469415 DOT1LQ8TEK3 1739 aa20.39■□□□□ 0.85
MCF2L-221ENST00000469415 GTF2F1P35269 517 aaKnown RBP eCLIP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 169.7 ms