RNA–Protein interactions for RNA: ENST00000469336.1

UBE3C-204, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-204ENST00000469336 FAM196AQ6ZSG2 479 aa8.61□□□□□ -1.03
UBE3C-204ENST00000469336 SPRED2Q7Z698 418 aa8.61□□□□□ -1.03
UBE3C-204ENST00000469336 BCL7CQ8WUZ0 217 aaPredicted RBP8.61□□□□□ -1.03
UBE3C-204ENST00000469336 GATAD2BQ8WXI9 593 aa8.61□□□□□ -1.03
UBE3C-204ENST00000469336 GPRASP2Q96D09 838 aa8.61□□□□□ -1.03
UBE3C-204ENST00000469336 ACSBG1Q96GR2 724 aa8.61□□□□□ -1.03
UBE3C-204ENST00000469336 SPATA32Q96LK8 384 aa8.61□□□□□ -1.03
UBE3C-204ENST00000469336 LRRC3Q9BY71 257 aa8.61□□□□□ -1.03
UBE3C-204ENST00000469336 GOLGA2P5Q9HBQ8 144 aa8.61□□□□□ -1.03
UBE3C-204ENST00000469336 CAPN10Q9HC96 672 aa8.61□□□□□ -1.03
UBE3C-204ENST00000469336 FAM221AA4D161 298 aa8.6□□□□□ -1.03
UBE3C-204ENST00000469336 DCDC2CA8MYV0 355 aa8.6□□□□□ -1.03
UBE3C-204ENST00000469336 F13A1P00488 732 aa8.6□□□□□ -1.03
UBE3C-204ENST00000469336 PPM1JQ5JR12 505 aa8.6□□□□□ -1.03
UBE3C-204ENST00000469336 BNC2Q6ZN30 1099 aaPredicted RBP8.6□□□□□ -1.03
UBE3C-204ENST00000469336 CBLL1Q75N03 491 aa8.6□□□□□ -1.03
UBE3C-204ENST00000469336 UBE3DQ7Z6J8 389 aa8.6□□□□□ -1.03
UBE3C-204ENST00000469336 RASGRP4Q8TDF6 673 aa8.6□□□□□ -1.03
UBE3C-204ENST00000469336 DUSP23Q9BVJ7 150 aa8.6□□□□□ -1.03
UBE3C-204ENST00000469336 SSU72Q9NP77 194 aaKnown RBP8.6□□□□□ -1.03
UBE3C-204ENST00000469336 PCOLCE2Q9UKZ9 415 aa8.6□□□□□ -1.03
UBE3C-204ENST00000469336 CILPO75339 1184 aa8.59□□□□□ -1.03
UBE3C-204ENST00000469336 TOP6BLQ8N6T0 577 aa8.59□□□□□ -1.03
UBE3C-204ENST00000469336 EAF1Q96JC9 268 aaPredicted RBP8.59□□□□□ -1.03
UBE3C-204ENST00000469336 PTPN11Q06124 597 aaPredicted RBP8.58□□□□□ -1.04
UBE3C-204ENST00000469336 MPP2Q14168 576 aa8.58□□□□□ -1.04
UBE3C-204ENST00000469336 C12orf40Q86WS4 652 aa8.58□□□□□ -1.04
UBE3C-204ENST00000469336 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.58□□□□□ -1.04
UBE3C-204ENST00000469336 RNF214Q8ND24 703 aa8.58□□□□□ -1.04
UBE3C-204ENST00000469336 SLC5A6Q9Y289 635 aa8.58□□□□□ -1.04
UBE3C-204ENST00000469336 ERVK-24P63145 666 aa8.57□□□□□ -1.04
UBE3C-204ENST00000469336 RPL6Q02878 288 aaKnown RBP8.57□□□□□ -1.04
UBE3C-204ENST00000469336 APOBRQ0VD83 1088 aa8.57□□□□□ -1.04
UBE3C-204ENST00000469336 JARID2Q92833 1246 aaPredicted RBP8.57□□□□□ -1.04
UBE3C-204ENST00000469336 UBP1Q9NZI7 540 aa8.57□□□□□ -1.04
UBE3C-204ENST00000469336 PCDHA4Q9UN74 947 aa8.57□□□□□ -1.04
UBE3C-204ENST00000469336 BPNT1O95861 308 aa8.56□□□□□ -1.04
UBE3C-204ENST00000469336 NTF4P34130 210 aa8.56□□□□□ -1.04
UBE3C-204ENST00000469336 TXKP42681 527 aa8.56□□□□□ -1.04
UBE3C-204ENST00000469336 CRKP46108 304 aa8.56□□□□□ -1.04
UBE3C-204ENST00000469336 COL9A2Q14055 689 aaPredicted RBP8.56□□□□□ -1.04
UBE3C-204ENST00000469336 SLITRK4Q8IW52 837 aa8.56□□□□□ -1.04
UBE3C-204ENST00000469336 NETO1Q8TDF5 533 aa8.56□□□□□ -1.04
UBE3C-204ENST00000469336 GMLQ99445 158 aa8.56□□□□□ -1.04
UBE3C-204ENST00000469336 RBAK-RBAKDNI3L0D1 243 aa8.55□□□□□ -1.04
UBE3C-204ENST00000469336 CD8BP10966 210 aa8.55□□□□□ -1.04
UBE3C-204ENST00000469336 PLCL1Q15111 1095 aa8.55□□□□□ -1.04
UBE3C-204ENST00000469336 CWF19L2Q2TBE0 894 aaKnown RBP8.55□□□□□ -1.04
UBE3C-204ENST00000469336 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.55□□□□□ -1.04
UBE3C-204ENST00000469336 REC114Q7Z4M0 266 aa8.55□□□□□ -1.04
UBE3C-204ENST00000469336 AGBL5Q8NDL9 886 aa8.55□□□□□ -1.04
UBE3C-204ENST00000469336 SREK1Q8WXA9 508 aaKnown RBP8.55□□□□□ -1.04
UBE3C-204ENST00000469336 PLAGL2Q9UPG8 496 aa8.55□□□□□ -1.04
UBE3C-204ENST00000469336 SNCAIPQ9Y6H5 919 aa8.55□□□□□ -1.04
UBE3C-204ENST00000469336 ITIH2P19823 946 aa8.54□□□□□ -1.04
UBE3C-204ENST00000469336 OXCT1P55809 520 aa8.54□□□□□ -1.04
UBE3C-204ENST00000469336 ARID5AQ03989 594 aa8.54□□□□□ -1.04
UBE3C-204ENST00000469336 SF3A1Q15459 793 aaKnown RBP8.54□□□□□ -1.04
UBE3C-204ENST00000469336 WIPI1Q5MNZ9 446 aaPredicted RBP8.54□□□□□ -1.04
UBE3C-204ENST00000469336 VPS37DQ86XT2 251 aa8.54□□□□□ -1.04
UBE3C-204ENST00000469336 FBXO27Q8NI29 283 aa8.54□□□□□ -1.04
UBE3C-204ENST00000469336 NKD1Q969G9 470 aa8.54□□□□□ -1.04
UBE3C-204ENST00000469336 SEC16BQ96JE7 1060 aa8.54□□□□□ -1.04
UBE3C-204ENST00000469336 HEXIM2Q96MH2 286 aaKnown RBP8.54□□□□□ -1.04
UBE3C-204ENST00000469336 TACC3Q9Y6A5 838 aa8.54□□□□□ -1.04
UBE3C-204ENST00000469336 ATF4P18848 351 aaPredicted RBP8.53□□□□□ -1.04
UBE3C-204ENST00000469336 ZNF792Q3KQV3 632 aa8.53□□□□□ -1.04
UBE3C-204ENST00000469336 LRFN4Q6PJG9 635 aa8.53□□□□□ -1.04
UBE3C-204ENST00000469336 ARHGAP27Q6ZUM4 889 aa8.53□□□□□ -1.04
UBE3C-204ENST00000469336 HDXQ7Z353 690 aa8.53□□□□□ -1.04
UBE3C-204ENST00000469336 PLPPR2Q96GM1 343 aa8.53□□□□□ -1.04
UBE3C-204ENST00000469336 PICK1Q9NRD5 415 aa8.53□□□□□ -1.04
UBE3C-204ENST00000469336 GFRA2O00451 464 aa8.52□□□□□ -1.05
UBE3C-204ENST00000469336 TLR3O15455 904 aaKnown RBP8.52□□□□□ -1.05
UBE3C-204ENST00000469336 CEACAM5P06731 702 aa8.52□□□□□ -1.05
UBE3C-204ENST00000469336 SOX9P48436 509 aa8.52□□□□□ -1.05
UBE3C-204ENST00000469336 INPP5AQ14642 412 aa8.52□□□□□ -1.05
UBE3C-204ENST00000469336 SEZ6Q53EL9 994 aa8.52□□□□□ -1.05
UBE3C-204ENST00000469336 FGRP09769 529 aa8.51□□□□□ -1.05
UBE3C-204ENST00000469336 ITGB5P18084 799 aa8.51□□□□□ -1.05
UBE3C-204ENST00000469336 CDK8P49336 464 aa8.51□□□□□ -1.05
UBE3C-204ENST00000469336 RING1Q06587 406 aa8.51□□□□□ -1.05
UBE3C-204ENST00000469336 AOC3Q16853 763 aa8.51□□□□□ -1.05
UBE3C-204ENST00000469336 CYFIP1Q7L576 1253 aa8.51□□□□□ -1.05
UBE3C-204ENST00000469336 FAM214BQ7L5A3 538 aa8.51□□□□□ -1.05
UBE3C-204ENST00000469336 STK11IPQ8N1F8 1099 aa8.51□□□□□ -1.05
UBE3C-204ENST00000469336 REXO1Q8N1G1 1221 aaKnown RBP8.51□□□□□ -1.05
UBE3C-204ENST00000469336 ELMO3Q96BJ8 720 aa8.51□□□□□ -1.05
UBE3C-204ENST00000469336 GINM1Q9NU53 330 aa8.51□□□□□ -1.05
UBE3C-204ENST00000469336 ADAMTS6Q9UKP5 1117 aa8.51□□□□□ -1.05
UBE3C-204ENST00000469336 DNAJA1P31689 397 aaKnown RBP8.5□□□□□ -1.05
UBE3C-204ENST00000469336 ZNF165P49910 485 aa8.5□□□□□ -1.05
UBE3C-204ENST00000469336 IFI16Q16666 785 aaKnown RBP8.5□□□□□ -1.05
UBE3C-204ENST00000469336 ZBTB37Q5TC79 503 aa8.5□□□□□ -1.05
UBE3C-204ENST00000469336 TANGO6Q9C0B7 1094 aa8.5□□□□□ -1.05
UBE3C-204ENST00000469336 STRIP2Q9ULQ0 834 aa8.5□□□□□ -1.05
UBE3C-204ENST00000469336 EFR3BQ9Y2G0 817 aa8.5□□□□□ -1.05
UBE3C-204ENST00000469336 POLR3KQ9Y2Y1 108 aaPredicted RBP8.5□□□□□ -1.05
UBE3C-204ENST00000469336 PRR36Q9H6K5 1346 aa8.5□□□□□ -1.05
UBE3C-204ENST00000469336 PRAMEF27A3QJZ7 478 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms