RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 NOM1Q5C9Z4 860 aaKnown RBP10.21□□□□□ -0.77
SSBP1-208ENST00000469123 CTR9Q6PD62 1173 aa10.21□□□□□ -0.77
SSBP1-208ENST00000469123 CASC1Q6TDU7 716 aa10.21□□□□□ -0.77
SSBP1-208ENST00000469123 C16orf86Q6ZW13 317 aa10.21□□□□□ -0.77
SSBP1-208ENST00000469123 FASTKD5Q7L8L6 764 aaKnown RBP10.21□□□□□ -0.77
SSBP1-208ENST00000469123 IFNL3Q8IZI9 196 aa10.21□□□□□ -0.77
SSBP1-208ENST00000469123 DNAJC18Q9H819 358 aa10.21□□□□□ -0.77
SSBP1-208ENST00000469123 FZD1Q9UP38 647 aa10.21□□□□□ -0.77
SSBP1-208ENST00000469123 PHIPQ8WWQ0 1821 aa10.21□□□□□ -0.78
SSBP1-208ENST00000469123 PTPRFP10586 1907 aa10.21□□□□□ -0.78
SSBP1-208ENST00000469123 A0A0D9SFI3 127 aa10.2□□□□□ -0.78
SSBP1-208ENST00000469123 C19orf81C9J6K1 198 aa10.2□□□□□ -0.78
SSBP1-208ENST00000469123 IRF6O14896 467 aa10.2□□□□□ -0.78
SSBP1-208ENST00000469123 CHGBP05060 677 aa10.2□□□□□ -0.78
SSBP1-208ENST00000469123 HSPA1AP0DMV8 641 aaKnown RBP10.2□□□□□ -0.78
SSBP1-208ENST00000469123 HSPA1BP0DMV9 641 aaKnown RBP10.2□□□□□ -0.78
SSBP1-208ENST00000469123 CTCFP49711 727 aaPredicted RBP10.2□□□□□ -0.78
SSBP1-208ENST00000469123 PDE4BQ07343 736 aa10.2□□□□□ -0.78
SSBP1-208ENST00000469123 NMIQ13287 307 aaPredicted RBP10.2□□□□□ -0.78
SSBP1-208ENST00000469123 ABCB5Q2M3G0 1257 aa10.2□□□□□ -0.78
SSBP1-208ENST00000469123 TMEM179Q6ZVK1 233 aa10.2□□□□□ -0.78
SSBP1-208ENST00000469123 ZNF280CQ8ND82 737 aa10.2□□□□□ -0.78
SSBP1-208ENST00000469123 MS4A4AQ96JQ5 239 aa10.2□□□□□ -0.78
SSBP1-208ENST00000469123 FAM227BQ96M60 508 aa10.2□□□□□ -0.78
SSBP1-208ENST00000469123 WDR18Q9BV38 432 aa10.2□□□□□ -0.78
SSBP1-208ENST00000469123 DSCC1Q9BVC3 393 aa10.2□□□□□ -0.78
SSBP1-208ENST00000469123 ZBTB21Q9ULJ3 1066 aa10.2□□□□□ -0.78
SSBP1-208ENST00000469123 SLC45A1Q9Y2W3 748 aa10.2□□□□□ -0.78
SSBP1-208ENST00000469123 AFG3L2Q9Y4W6 797 aa10.2□□□□□ -0.78
SSBP1-208ENST00000469123 ZHX2Q9Y6X8 837 aa10.2□□□□□ -0.78
SSBP1-208ENST00000469123 CCL15-CCL14A0A0B4J2E2 113 aa10.19□□□□□ -0.78
SSBP1-208ENST00000469123 HSPD1P10809 573 aaKnown RBP10.19□□□□□ -0.78
SSBP1-208ENST00000469123 SHMT1P34896 483 aa10.19□□□□□ -0.78
SSBP1-208ENST00000469123 GJA5P36382 358 aa10.19□□□□□ -0.78
SSBP1-208ENST00000469123 USP14P54578 494 aa10.19□□□□□ -0.78
SSBP1-208ENST00000469123 PABPC4Q13310 644 aaKnown RBP eCLIP10.19□□□□□ -0.782e-25■■■□□ 18
SSBP1-208ENST00000469123 CCL15Q16663 113 aa10.19□□□□□ -0.78
SSBP1-208ENST00000469123 CWC27Q6UX04 472 aaKnown RBP10.19□□□□□ -0.78
SSBP1-208ENST00000469123 IFNL1Q8IU54 200 aa10.19□□□□□ -0.78
SSBP1-208ENST00000469123 PROCA1Q8NCQ7 364 aaPredicted RBP10.19□□□□□ -0.78
SSBP1-208ENST00000469123 SEC62Q99442 399 aaKnown RBP10.19□□□□□ -0.78
SSBP1-208ENST00000469123 SH2D4AQ9H788 454 aa10.19□□□□□ -0.78
SSBP1-208ENST00000469123 EPB41L4AQ9HCS5 686 aaPredicted RBP10.19□□□□□ -0.78
SSBP1-208ENST00000469123 CTNNA3Q9UI47 895 aa10.19□□□□□ -0.78
SSBP1-208ENST00000469123 ANAPC4Q9UJX5 808 aa10.19□□□□□ -0.78
SSBP1-208ENST00000469123 A0A0G2JLL6 359 aaPredicted RBP10.18□□□□□ -0.78
SSBP1-208ENST00000469123 FAM196BA6NMK8 535 aa10.18□□□□□ -0.78
SSBP1-208ENST00000469123 MINDY4BA8MYZ0 360 aa10.18□□□□□ -0.78
SSBP1-208ENST00000469123 GH2P01242 217 aa10.18□□□□□ -0.78
SSBP1-208ENST00000469123 CHMLP26374 656 aa10.18□□□□□ -0.78
SSBP1-208ENST00000469123 CDK8P49336 464 aa10.18□□□□□ -0.78
SSBP1-208ENST00000469123 PPARAQ07869 468 aa10.18□□□□□ -0.78
SSBP1-208ENST00000469123 MKRN3Q13064 507 aaKnown RBP10.18□□□□□ -0.78
SSBP1-208ENST00000469123 PRRT2Q7Z6L0 340 aaPredicted RBP10.18□□□□□ -0.78
SSBP1-208ENST00000469123 ANKRD23Q86SG2 305 aa10.18□□□□□ -0.78
SSBP1-208ENST00000469123 RNF41Q9H4P4 317 aaPredicted RBP10.18□□□□□ -0.78
SSBP1-208ENST00000469123 MKNK2Q9HBH9 465 aa10.18□□□□□ -0.78
SSBP1-208ENST00000469123 PNMA3Q9UL41 463 aa10.18□□□□□ -0.78
SSBP1-208ENST00000469123 SYNPO2Q9UMS6 1093 aa10.18□□□□□ -0.78
SSBP1-208ENST00000469123 PLIN4Q96Q06 1357 aa10.17□□□□□ -0.78
SSBP1-208ENST00000469123 LAMA4Q16363 1823 aa10.17□□□□□ -0.78
SSBP1-208ENST00000469123 LOC285556D6RIA3 1793 aa10.17□□□□□ -0.78
SSBP1-208ENST00000469123 USP17L10C9JJH3 530 aa10.17□□□□□ -0.78
SSBP1-208ENST00000469123 GDF11O95390 407 aa10.17□□□□□ -0.78
SSBP1-208ENST00000469123 CYP2D6P10635 497 aa10.17□□□□□ -0.78
SSBP1-208ENST00000469123 BACE1P56817 501 aa10.17□□□□□ -0.78
SSBP1-208ENST00000469123 SLC4A8Q2Y0W8 1093 aa10.17□□□□□ -0.78
SSBP1-208ENST00000469123 SH3D19Q5HYK7 790 aa10.17□□□□□ -0.78
SSBP1-208ENST00000469123 CCDC129Q6ZRS4 1044 aa10.17□□□□□ -0.78
SSBP1-208ENST00000469123 ZNF589Q86UQ0 364 aaPredicted RBP10.17□□□□□ -0.78
SSBP1-208ENST00000469123 ZNF444Q8N0Y2 327 aaPredicted RBP10.17□□□□□ -0.78
SSBP1-208ENST00000469123 CNKSR2Q8WXI2 1034 aa10.17□□□□□ -0.78
SSBP1-208ENST00000469123 BRI3BPQ8WY22 251 aa10.17□□□□□ -0.78
SSBP1-208ENST00000469123 ZIC5Q96T25 663 aa10.17□□□□□ -0.78
SSBP1-208ENST00000469123 KANSL2Q9H9L4 492 aa10.17□□□□□ -0.78
SSBP1-208ENST00000469123 ZFYVE28Q9HCC9 887 aa10.17□□□□□ -0.78
SSBP1-208ENST00000469123 ARHGEF10LQ9HCE6 1279 aa10.17□□□□□ -0.78
SSBP1-208ENST00000469123 PRDM10Q9NQV6 1147 aa10.17□□□□□ -0.78
SSBP1-208ENST00000469123 RNF186Q9NXI6 227 aa10.17□□□□□ -0.78
SSBP1-208ENST00000469123 TMOD4Q9NZQ9 345 aa10.17□□□□□ -0.78
SSBP1-208ENST00000469123 GREB1LQ9C091 1923 aaPredicted RBP10.16□□□□□ -0.78
SSBP1-208ENST00000469123 TRIM75PA6NK02 468 aa10.16□□□□□ -0.78
SSBP1-208ENST00000469123 MPHOSPH10O00566 681 aaKnown RBP10.16□□□□□ -0.78
SSBP1-208ENST00000469123 SGSM2O43147 1006 aa10.16□□□□□ -0.78
SSBP1-208ENST00000469123 ORC4O43929 436 aa10.16□□□□□ -0.78
SSBP1-208ENST00000469123 EIF5BO60841 1220 aaKnown RBP10.16□□□□□ -0.78
SSBP1-208ENST00000469123 FGAP02671 866 aa10.16□□□□□ -0.78
SSBP1-208ENST00000469123 SPP2Q13103 211 aa10.16□□□□□ -0.78
SSBP1-208ENST00000469123 RAB3GAP1Q15042 981 aa10.16□□□□□ -0.78
SSBP1-208ENST00000469123 IMMTQ16891 758 aaKnown RBP10.16□□□□□ -0.78
SSBP1-208ENST00000469123 USP17L2Q6R6M4 530 aa10.16□□□□□ -0.78
SSBP1-208ENST00000469123 KIAA1211Q6ZU35 1233 aa10.16□□□□□ -0.78
SSBP1-208ENST00000469123 GTF3C2Q8WUA4 911 aaPredicted RBP10.16□□□□□ -0.78
SSBP1-208ENST00000469123 DYNLL2Q96FJ2 89 aa10.16□□□□□ -0.78
SSBP1-208ENST00000469123 PARK7Q99497 189 aaKnown RBP10.16□□□□□ -0.78
SSBP1-208ENST00000469123 FEZ1Q99689 392 aa10.16□□□□□ -0.78
SSBP1-208ENST00000469123 KIAA1683Q9H0B3 1180 aa10.16□□□□□ -0.78
SSBP1-208ENST00000469123 AGTPBP1Q9UPW5 1226 aa10.16□□□□□ -0.78
SSBP1-208ENST00000469123 BTBD19C9JJ37 291 aa10.15□□□□□ -0.78
SSBP1-208ENST00000469123 IGF2BP3O00425 579 aaKnown RBP eCLIP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms