RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 USP31Q70CQ4 1352 aa10.69□□□□□ -0.7
SCAF11-205ENST00000465950 RPAP1Q9BWH6 1393 aaPredicted RBP10.69□□□□□ -0.7
SCAF11-205ENST00000465950 IDEP14735 1019 aa10.69□□□□□ -0.7
SCAF11-205ENST00000465950 TAF4BQ92750 862 aa10.69□□□□□ -0.7
SCAF11-205ENST00000465950 PIDD1Q9HB75 910 aa10.69□□□□□ -0.7
SCAF11-205ENST00000465950 F8W8V4 182 aa10.69□□□□□ -0.7
SCAF11-205ENST00000465950 STK3Q13188 491 aa10.69□□□□□ -0.7
SCAF11-205ENST00000465950 SLFN13Q68D06 897 aa10.69□□□□□ -0.7
SCAF11-205ENST00000465950 MIS18BP1Q6P0N0 1132 aa10.69□□□□□ -0.7
SCAF11-205ENST00000465950 TMEM179Q6ZVK1 233 aa10.69□□□□□ -0.7
SCAF11-205ENST00000465950 SLC26A6Q9BXS9 759 aa10.69□□□□□ -0.7
SCAF11-205ENST00000465950 LGR6Q9HBX8 967 aa10.69□□□□□ -0.7
SCAF11-205ENST00000465950 EXOC1Q9NV70 894 aa10.69□□□□□ -0.7
SCAF11-205ENST00000465950 CHL1O00533 1208 aa10.69□□□□□ -0.7
SCAF11-205ENST00000465950 TFCP2Q12800 502 aa10.69□□□□□ -0.7
SCAF11-205ENST00000465950 GALNT17Q6IS24 598 aa10.69□□□□□ -0.7
SCAF11-205ENST00000465950 SRP68Q9UHB9 627 aaKnown RBP10.69□□□□□ -0.7
SCAF11-205ENST00000465950 GINS2Q9Y248 185 aa10.69□□□□□ -0.7
SCAF11-205ENST00000465950 ATP6V0A2Q9Y487 856 aa10.69□□□□□ -0.7
SCAF11-205ENST00000465950 USP17L10C9JJH3 530 aa10.68□□□□□ -0.7
SCAF11-205ENST00000465950 KPNA6O60684 536 aa10.68□□□□□ -0.7
SCAF11-205ENST00000465950 RARBP10826 455 aa10.68□□□□□ -0.7
SCAF11-205ENST00000465950 IQCEQ6IPM2 695 aa10.68□□□□□ -0.7
SCAF11-205ENST00000465950 FCHSD1Q86WN1 690 aa10.68□□□□□ -0.7
SCAF11-205ENST00000465950 CCDC24Q8N4L8 307 aa10.68□□□□□ -0.7
SCAF11-205ENST00000465950 CLTCQ00610 1675 aaKnown RBP10.68□□□□□ -0.7
SCAF11-205ENST00000465950 CPDO75976 1380 aa10.68□□□□□ -0.7
SCAF11-205ENST00000465950 FER1L4A9Z1Z3 1794 aa10.68□□□□□ -0.7
SCAF11-205ENST00000465950 CCL15-CCL14A0A0B4J2E2 113 aa10.68□□□□□ -0.7
SCAF11-205ENST00000465950 CTNNA2P26232 953 aa10.68□□□□□ -0.7
SCAF11-205ENST00000465950 TTLL4Q14679 1199 aa10.68□□□□□ -0.7
SCAF11-205ENST00000465950 CCL15Q16663 113 aa10.68□□□□□ -0.7
SCAF11-205ENST00000465950 ASPRV1Q53RT3 343 aa10.68□□□□□ -0.7
SCAF11-205ENST00000465950 CFAP58Q5T655 872 aa10.68□□□□□ -0.7
SCAF11-205ENST00000465950 ZNF449Q6P9G9 518 aa10.68□□□□□ -0.7
SCAF11-205ENST00000465950 MICU3Q86XE3 530 aa10.68□□□□□ -0.7
SCAF11-205ENST00000465950 DEPTORQ8TB45 409 aa10.68□□□□□ -0.7
SCAF11-205ENST00000465950 BICC1Q9H694 974 aaKnown RBP10.68□□□□□ -0.7
SCAF11-205ENST00000465950 TMEM88BA6NKF7 163 aa10.68□□□□□ -0.7
SCAF11-205ENST00000465950 PTPREP23469 700 aa10.68□□□□□ -0.7
SCAF11-205ENST00000465950 SP4Q02446 784 aa10.68□□□□□ -0.7
SCAF11-205ENST00000465950 SLC9C1Q4G0N8 1177 aa10.68□□□□□ -0.7
SCAF11-205ENST00000465950 TNS4Q8IZW8 715 aa10.68□□□□□ -0.7
SCAF11-205ENST00000465950 PCSK9Q8NBP7 692 aaKnown RBP10.68□□□□□ -0.7
SCAF11-205ENST00000465950 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.68□□□□□ -0.7
SCAF11-205ENST00000465950 POLR2BP30876 1174 aaKnown RBP10.68□□□□□ -0.7
SCAF11-205ENST00000465950 CACNA2D4Q7Z3S7 1137 aa10.68□□□□□ -0.7
SCAF11-205ENST00000465950 POLR3EQ9NVU0 708 aa10.68□□□□□ -0.7
SCAF11-205ENST00000465950 MYL3P08590 195 aa10.67□□□□□ -0.7
SCAF11-205ENST00000465950 FSTL1Q12841 308 aa10.67□□□□□ -0.7
SCAF11-205ENST00000465950 CCDC14Q49A88 953 aa10.67□□□□□ -0.7
SCAF11-205ENST00000465950 RCSD1Q6JBY9 416 aa10.67□□□□□ -0.7
SCAF11-205ENST00000465950 CCDC65Q8IXS2 484 aa10.67□□□□□ -0.7
SCAF11-205ENST00000465950 RUFY1Q96T51 708 aa10.67□□□□□ -0.7
SCAF11-205ENST00000465950 RIOK1Q9BRS2 568 aaKnown RBP10.67□□□□□ -0.7
SCAF11-205ENST00000465950 CLIP2Q9UDT6 1046 aa10.67□□□□□ -0.7
SCAF11-205ENST00000465950 SERPINB13Q9UIV8 391 aa10.67□□□□□ -0.7
SCAF11-205ENST00000465950 CD163L1Q9NR16 1453 aa10.67□□□□□ -0.7
SCAF11-205ENST00000465950 GBP2P32456 591 aaPredicted RBP10.67□□□□□ -0.7
SCAF11-205ENST00000465950 KRT2P35908 639 aa10.67□□□□□ -0.7
SCAF11-205ENST00000465950 PRPHP41219 470 aa10.67□□□□□ -0.7
SCAF11-205ENST00000465950 GOLGA8FQ08AF8 430 aa10.67□□□□□ -0.7
SCAF11-205ENST00000465950 GOLGA8DPQ0D2H9 430 aa10.67□□□□□ -0.7
SCAF11-205ENST00000465950 GPC2Q8N158 579 aa10.67□□□□□ -0.7
SCAF11-205ENST00000465950 TSNARE1Q96NA8 513 aa10.67□□□□□ -0.7
SCAF11-205ENST00000465950 ZC3H4Q9UPT8 1303 aaKnown RBP10.67□□□□□ -0.7
SCAF11-205ENST00000465950 CFBP00751 764 aa10.67□□□□□ -0.7
SCAF11-205ENST00000465950 STAG3L1P0CL83 205 aa10.67□□□□□ -0.7
SCAF11-205ENST00000465950 BFSP2Q13515 415 aa10.67□□□□□ -0.7
SCAF11-205ENST00000465950 NFIXQ14938 502 aa10.67□□□□□ -0.7
SCAF11-205ENST00000465950 CHST3Q7LGC8 479 aa10.67□□□□□ -0.7
SCAF11-205ENST00000465950 ENGASEQ8NFI3 743 aa10.67□□□□□ -0.7
SCAF11-205ENST00000465950 MMP19Q99542 508 aa10.67□□□□□ -0.7
SCAF11-205ENST00000465950 SCAND2PQ9GZW5 306 aaPredicted RBP10.67□□□□□ -0.7
SCAF11-205ENST00000465950 SEPT7Q16181 437 aaKnown RBP10.67□□□□□ -0.7
SCAF11-205ENST00000465950 CWF19L2Q2TBE0 894 aaKnown RBP10.67□□□□□ -0.7
SCAF11-205ENST00000465950 FOXD4L5Q5VV16 416 aaPredicted RBP10.67□□□□□ -0.7
SCAF11-205ENST00000465950 C7orf31Q8N865 590 aa10.67□□□□□ -0.7
SCAF11-205ENST00000465950 FOXD4L4Q8WXT5 416 aaPredicted RBP10.67□□□□□ -0.7
SCAF11-205ENST00000465950 PCDHA1Q9Y5I3 950 aa10.67□□□□□ -0.7
SCAF11-205ENST00000465950 MADDQ8WXG6 1647 aa10.67□□□□□ -0.7
SCAF11-205ENST00000465950 UQCRHLA0A096LP55 91 aa10.66□□□□□ -0.7
SCAF11-205ENST00000465950 NEURL1BA8MQ27 555 aa10.66□□□□□ -0.7
SCAF11-205ENST00000465950 MAPK4P31152 587 aa10.66□□□□□ -0.7
SCAF11-205ENST00000465950 MKRN3Q13064 507 aaKnown RBP10.66□□□□□ -0.7
SCAF11-205ENST00000465950 IFI16Q16666 785 aaKnown RBP10.66□□□□□ -0.7
SCAF11-205ENST00000465950 AOC3Q16853 763 aa10.66□□□□□ -0.7
SCAF11-205ENST00000465950 JARID2Q92833 1246 aaPredicted RBP10.66□□□□□ -0.7
SCAF11-205ENST00000465950 SECISBP2LQ93073 1101 aaKnown RBP10.66□□□□□ -0.7
SCAF11-205ENST00000465950 FEM1BQ9UK73 627 aa10.66□□□□□ -0.7
SCAF11-205ENST00000465950 ADGRB2O60241 1585 aa10.66□□□□□ -0.7
SCAF11-205ENST00000465950 TNNI3KQ59H18 835 aa10.66□□□□□ -0.7
SCAF11-205ENST00000465950 RPUSD2Q8IZ73 545 aaKnown RBP10.66□□□□□ -0.7
SCAF11-205ENST00000465950 KIAA1524Q8TCG1 905 aa10.66□□□□□ -0.7
SCAF11-205ENST00000465950 OTUD5Q96G74 571 aa10.66□□□□□ -0.7
SCAF11-205ENST00000465950 FPGT-TNNI3KV9GXZ4 949 aa10.66□□□□□ -0.7
SCAF11-205ENST00000465950 USP17L12C9JPN9 530 aa10.66□□□□□ -0.7
SCAF11-205ENST00000465950 USP17L21D6R901 530 aa10.66□□□□□ -0.7
SCAF11-205ENST00000465950 RIOK3O14730 519 aaKnown RBP10.66□□□□□ -0.7
SCAF11-205ENST00000465950 HOXA2O43364 376 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms