RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 FGRP09769 529 aa23.47■■□□□ 1.35
TUBGCP3-204ENST00000464139 RFC4P35249 363 aa23.47■■□□□ 1.35
TUBGCP3-204ENST00000464139 AKAP17AQ02040 695 aaKnown RBP23.47■■□□□ 1.35
TUBGCP3-204ENST00000464139 SLC4A8Q2Y0W8 1093 aa23.47■■□□□ 1.35
TUBGCP3-204ENST00000464139 FILIP1Q7Z7B0 1213 aa23.47■■□□□ 1.35
TUBGCP3-204ENST00000464139 RNF26Q9BY78 433 aaPredicted RBP23.47■■□□□ 1.35
TUBGCP3-204ENST00000464139 CRNKL1Q9BZJ0 848 aaKnown RBP23.47■■□□□ 1.35
TUBGCP3-204ENST00000464139 RILPL1Q5EBL4 403 aa23.46■■□□□ 1.35
TUBGCP3-204ENST00000464139 FAM47AQ5JRC9 791 aa23.46■■□□□ 1.35
TUBGCP3-204ENST00000464139 CABP5Q9NP86 173 aa23.46■■□□□ 1.35
TUBGCP3-204ENST00000464139 PDS5AQ29RF7 1337 aaKnown RBP23.46■■□□□ 1.35
TUBGCP3-204ENST00000464139 FUT2Q10981 343 aa23.45■■□□□ 1.35
TUBGCP3-204ENST00000464139 PKN1Q16512 942 aa23.45■■□□□ 1.35
TUBGCP3-204ENST00000464139 TUBE1Q9UJT0 475 aa23.45■■□□□ 1.35
TUBGCP3-204ENST00000464139 V9GY48 417 aaPredicted RBP23.45■■□□□ 1.35
TUBGCP3-204ENST00000464139 TROAPQ12815 778 aa23.45■■□□□ 1.34
TUBGCP3-204ENST00000464139 METTL16Q86W50 562 aaKnown RBP23.45■■□□□ 1.34
TUBGCP3-204ENST00000464139 LRRC8AQ8IWT6 810 aa23.45■■□□□ 1.34
TUBGCP3-204ENST00000464139 ANKIB1Q9P2G1 1089 aa23.45■■□□□ 1.34
TUBGCP3-204ENST00000464139 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.45■■□□□ 1.34
TUBGCP3-204ENST00000464139 NHSQ6T4R5 1651 aa23.45■■□□□ 1.34
TUBGCP3-204ENST00000464139 FAM205CA6NFA0 338 aa23.44■■□□□ 1.34
TUBGCP3-204ENST00000464139 PPP2R5BQ15173 497 aa23.44■■□□□ 1.34
TUBGCP3-204ENST00000464139 TRAPPC3LQ5T215 181 aa23.44■■□□□ 1.34
TUBGCP3-204ENST00000464139 CNNM3Q8NE01 707 aa23.44■■□□□ 1.34
TUBGCP3-204ENST00000464139 FBXO2Q9UK22 296 aaPredicted RBP23.44■■□□□ 1.34
TUBGCP3-204ENST00000464139 TNRC6CQ9HCJ0 1690 aaKnown RBP23.44■■□□□ 1.34
TUBGCP3-204ENST00000464139 NCAPHQ15003 741 aa23.44■■□□□ 1.34
TUBGCP3-204ENST00000464139 KRBA2Q6ZNG9 492 aa23.44■■□□□ 1.34
TUBGCP3-204ENST00000464139 MYRIPQ8NFW9 859 aa23.44■■□□□ 1.34
TUBGCP3-204ENST00000464139 PRIMPOLQ96LW4 560 aa23.44■■□□□ 1.34
TUBGCP3-204ENST00000464139 FOXN1O15353 648 aa23.43■■□□□ 1.34
TUBGCP3-204ENST00000464139 FAM196AQ6ZSG2 479 aa23.43■■□□□ 1.34
TUBGCP3-204ENST00000464139 IRS2Q9Y4H2 1338 aa23.43■■□□□ 1.34
TUBGCP3-204ENST00000464139 PCP11498 1178 aaKnown RBP23.43■■□□□ 1.34
TUBGCP3-204ENST00000464139 NFIXQ14938 502 aa23.43■■□□□ 1.34
TUBGCP3-204ENST00000464139 DZIP1Q86YF9 867 aaKnown RBP23.43■■□□□ 1.34
TUBGCP3-204ENST00000464139 FOXP4Q8IVH2 680 aaPredicted RBP23.43■■□□□ 1.34
TUBGCP3-204ENST00000464139 PTPREP23469 700 aa23.42■■□□□ 1.34
TUBGCP3-204ENST00000464139 ATP8A2Q9NTI2 1148 aa23.42■■□□□ 1.34
TUBGCP3-204ENST00000464139 FAM13BQ9NYF5 915 aa23.42■■□□□ 1.34
TUBGCP3-204ENST00000464139 PRPF3O43395 683 aaKnown RBP23.42■■□□□ 1.34
TUBGCP3-204ENST00000464139 XPO4Q9C0E2 1151 aaKnown RBP23.42■■□□□ 1.34
TUBGCP3-204ENST00000464139 IFNKQ9P0W0 207 aa23.42■■□□□ 1.34
TUBGCP3-204ENST00000464139 TAF1LQ8IZX4 1826 aa23.42■■□□□ 1.34
TUBGCP3-204ENST00000464139 THSD7AQ9UPZ6 1657 aa23.42■■□□□ 1.34
TUBGCP3-204ENST00000464139 DYNC1I1O14576 645 aa23.41■■□□□ 1.34
TUBGCP3-204ENST00000464139 ORC4O43929 436 aa23.41■■□□□ 1.34
TUBGCP3-204ENST00000464139 SMC2O95347 1197 aa23.41■■□□□ 1.34
TUBGCP3-204ENST00000464139 HSP90AA2PQ14568 343 aaPredicted RBP23.41■■□□□ 1.34
TUBGCP3-204ENST00000464139 EARS2Q5JPH6 523 aaKnown RBP23.41■■□□□ 1.34
TUBGCP3-204ENST00000464139 GPR101Q96P66 508 aaPredicted RBP23.41■■□□□ 1.34
TUBGCP3-204ENST00000464139 BAZ2BQ9UIF8 2168 aaKnown RBP23.41■■□□□ 1.34
TUBGCP3-204ENST00000464139 LMOD1P29536 600 aaPredicted RBP23.41■■□□□ 1.34
TUBGCP3-204ENST00000464139 RBM28Q9NW13 759 aaKnown RBP23.41■■□□□ 1.34
TUBGCP3-204ENST00000464139 PCDHA5Q9Y5H7 936 aa23.41■■□□□ 1.34
TUBGCP3-204ENST00000464139 USP17L8P0C7I0 530 aa23.4■■□□□ 1.34
TUBGCP3-204ENST00000464139 XBP1P17861 261 aa23.4■■□□□ 1.34
TUBGCP3-204ENST00000464139 PHF20Q9BVI0 1012 aa23.4■■□□□ 1.34
TUBGCP3-204ENST00000464139 MCM9Q9NXL9 1143 aa23.4■■□□□ 1.34
TUBGCP3-204ENST00000464139 CCDC88AQ3V6T2 1871 aa23.4■■□□□ 1.34
TUBGCP3-204ENST00000464139 SMTNL1A8MU46 457 aa23.4■■□□□ 1.34
TUBGCP3-204ENST00000464139 TMTC3Q6ZXV5 915 aa23.4■■□□□ 1.34
TUBGCP3-204ENST00000464139 TSC1Q92574 1164 aa23.4■■□□□ 1.34
TUBGCP3-204ENST00000464139 C16orf45Q96MC5 204 aaPredicted RBP23.4■■□□□ 1.34
TUBGCP3-204ENST00000464139 POLR2DO15514 142 aaKnown RBP23.39■■□□□ 1.34
TUBGCP3-204ENST00000464139 CALM1P0DP23 149 aa23.39■■□□□ 1.34
TUBGCP3-204ENST00000464139 CALM2P0DP24 149 aa23.39■■□□□ 1.34
TUBGCP3-204ENST00000464139 CALM3P0DP25 149 aa23.39■■□□□ 1.34
TUBGCP3-204ENST00000464139 GRAPQ13588 217 aa23.39■■□□□ 1.34
TUBGCP3-204ENST00000464139 CNBD1Q8NA66 436 aa23.39■■□□□ 1.34
TUBGCP3-204ENST00000464139 GRAPLQ8TC17 118 aaPredicted RBP23.39■■□□□ 1.34
TUBGCP3-204ENST00000464139 ARPP21Q9UBL0 812 aaPredicted RBP23.39■■□□□ 1.34
TUBGCP3-204ENST00000464139 DDAH1O94760 285 aa23.39■■□□□ 1.33
TUBGCP3-204ENST00000464139 KRT2P35908 639 aa23.39■■□□□ 1.33
TUBGCP3-204ENST00000464139 TPM4P67936 248 aa23.39■■□□□ 1.33
TUBGCP3-204ENST00000464139 USP49Q70CQ1 688 aa23.39■■□□□ 1.33
TUBGCP3-204ENST00000464139 SRBD1Q8N5C6 995 aaKnown RBP23.39■■□□□ 1.33
TUBGCP3-204ENST00000464139 PDILTQ8N807 584 aa23.39■■□□□ 1.33
TUBGCP3-204ENST00000464139 LRRC4BQ9NT99 713 aa23.39■■□□□ 1.33
TUBGCP3-204ENST00000464139 TSPY2A6NKD2 308 aa23.38■■□□□ 1.33
TUBGCP3-204ENST00000464139 ATP1A3P13637 1013 aa23.38■■□□□ 1.33
TUBGCP3-204ENST00000464139 MDM2Q00987 491 aaPredicted RBP23.38■■□□□ 1.33
TUBGCP3-204ENST00000464139 GRIK5Q16478 980 aa23.38■■□□□ 1.33
TUBGCP3-204ENST00000464139 SPTY2D1Q68D10 685 aaPredicted RBP23.38■■□□□ 1.33
TUBGCP3-204ENST00000464139 HSD3B7Q9H2F3 369 aa23.38■■□□□ 1.33
TUBGCP3-204ENST00000464139 SERTAD1Q9UHV2 236 aa23.38■■□□□ 1.33
TUBGCP3-204ENST00000464139 DLEC1Q9Y238 1755 aa23.38■■□□□ 1.33
TUBGCP3-204ENST00000464139 SRPRBQ9Y5M8 271 aaKnown RBP23.38■■□□□ 1.33
TUBGCP3-204ENST00000464139 RRP9O43818 475 aaKnown RBP23.38■■□□□ 1.33
TUBGCP3-204ENST00000464139 SKILP12757 684 aa23.38■■□□□ 1.33
TUBGCP3-204ENST00000464139 PDE4BQ07343 736 aa23.38■■□□□ 1.33
TUBGCP3-204ENST00000464139 SBK1Q52WX2 424 aa23.38■■□□□ 1.33
TUBGCP3-204ENST00000464139 NOM1Q5C9Z4 860 aaKnown RBP23.38■■□□□ 1.33
TUBGCP3-204ENST00000464139 GJD4Q96KN9 370 aaPredicted RBP23.38■■□□□ 1.33
TUBGCP3-204ENST00000464139 CSRNP2Q9H175 543 aa23.38■■□□□ 1.33
TUBGCP3-204ENST00000464139 CEP131Q9UPN4 1083 aa23.38■■□□□ 1.33
TUBGCP3-204ENST00000464139 LY75O60449 1722 aa23.38■■□□□ 1.33
TUBGCP3-204ENST00000464139 IKBKBO14920 756 aa23.37■■□□□ 1.33
TUBGCP3-204ENST00000464139 LDHBP07195 334 aaKnown RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms