RNA–Protein interactions for RNA: ENST00000463343.1

SF1-212, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 983 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-212ENST00000463343 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.28■■□□□ 1
SF1-212ENST00000463343 ATP8A2Q9NTI2 1148 aa21.28■■□□□ 1
SF1-212ENST00000463343 GPAA1O43292 621 aa21.27■■□□□ 1
SF1-212ENST00000463343 PPATQ06203 517 aa21.27■■□□□ 1
SF1-212ENST00000463343 KIF22Q14807 665 aa21.27■■□□□ 1
SF1-212ENST00000463343 SLC9C1Q4G0N8 1177 aa21.27■■□□□ 1
SF1-212ENST00000463343 TTC22Q5TAA0 569 aa21.27■■□□□ 1
SF1-212ENST00000463343 MCM9Q9NXL9 1143 aa21.27■■□□□ 1
SF1-212ENST00000463343 HERC5Q9UII4 1024 aaKnown RBP21.27■■□□□ 1
SF1-212ENST00000463343 GSG1L2A8MUP6 293 aa21.26■□□□□ 0.99
SF1-212ENST00000463343 BTBD19C9JJ37 291 aa21.26■□□□□ 0.99
SF1-212ENST00000463343 IRF6O14896 467 aa21.26■□□□□ 0.99
SF1-212ENST00000463343 HLA-DOAP06340 250 aa21.26■□□□□ 0.99
SF1-212ENST00000463343 PLCD1P51178 756 aa21.26■□□□□ 0.99
SF1-212ENST00000463343 RRP1BQ14684 758 aaKnown RBP21.26■□□□□ 0.99
SF1-212ENST00000463343 HABP4Q5JVS0 413 aaKnown RBP21.26■□□□□ 0.99
SF1-212ENST00000463343 NOL9Q5SY16 702 aaKnown RBP21.26■□□□□ 0.99
SF1-212ENST00000463343 TTC6Q86TZ1 520 aa21.26■□□□□ 0.99
SF1-212ENST00000463343 SKAP1Q86WV1 359 aa21.26■□□□□ 0.99
SF1-212ENST00000463343 PTCH2Q9Y6C5 1203 aa21.26■□□□□ 0.99
SF1-212ENST00000463343 FOCADQ5VW36 1801 aa21.26■□□□□ 0.99
SF1-212ENST00000463343 BRCA2P51587 3418 aa21.26■□□□□ 0.99
SF1-212ENST00000463343 POLR3DP05423 398 aaPredicted RBP21.25■□□□□ 0.99
SF1-212ENST00000463343 CYP2D6P10635 497 aa21.25■□□□□ 0.99
SF1-212ENST00000463343 GSPT1P15170 499 aaKnown RBP21.25■□□□□ 0.99
SF1-212ENST00000463343 LACTBP83111 547 aaPredicted RBP21.25■□□□□ 0.99
SF1-212ENST00000463343 EVX2Q03828 476 aa21.25■□□□□ 0.99
SF1-212ENST00000463343 DNAJC18Q9H819 358 aa21.25■□□□□ 0.99
SF1-212ENST00000463343 CTNND1O60716 968 aaKnown RBP21.24■□□□□ 0.99
SF1-212ENST00000463343 SDSP20132 328 aa21.24■□□□□ 0.99
SF1-212ENST00000463343 CRACR2BQ8N4Y2 399 aaPredicted RBP21.24■□□□□ 0.99
SF1-212ENST00000463343 FAM227BQ96M60 508 aa21.24■□□□□ 0.99
SF1-212ENST00000463343 HELLSQ9NRZ9 838 aa21.24■□□□□ 0.99
SF1-212ENST00000463343 PPP4R2Q9NY27 417 aa21.24■□□□□ 0.99
SF1-212ENST00000463343 USP17L12C9JPN9 530 aa21.23■□□□□ 0.99
SF1-212ENST00000463343 USP17L21D6R901 530 aa21.23■□□□□ 0.99
SF1-212ENST00000463343 NMIQ13287 307 aaPredicted RBP21.23■□□□□ 0.99
SF1-212ENST00000463343 C17orf99Q6UX52 265 aa21.23■□□□□ 0.99
SF1-212ENST00000463343 CCDC129Q6ZRS4 1044 aa21.23■□□□□ 0.99
SF1-212ENST00000463343 SCYL3Q8IZE3 742 aa21.23■□□□□ 0.99
SF1-212ENST00000463343 EHD4Q9H223 541 aa21.23■□□□□ 0.99
SF1-212ENST00000463343 SERPINB13Q9UIV8 391 aa21.23■□□□□ 0.99
SF1-212ENST00000463343 KCNH4Q9UQ05 1017 aa21.23■□□□□ 0.99
SF1-212ENST00000463343 MYH1P12882 1939 aa21.22■□□□□ 0.99
SF1-212ENST00000463343 CYP2D7A0A087X1C5 515 aa21.22■□□□□ 0.99
SF1-212ENST00000463343 A0A0D9SFI3 127 aa21.22■□□□□ 0.99
SF1-212ENST00000463343 PATL2C9JE40 543 aaKnown RBP21.22■□□□□ 0.99
SF1-212ENST00000463343 GNAT2P19087 354 aa21.22■□□□□ 0.99
SF1-212ENST00000463343 CAP2P40123 477 aa21.22■□□□□ 0.99
SF1-212ENST00000463343 C12orf60Q5U649 245 aa21.22■□□□□ 0.99
SF1-212ENST00000463343 CTR9Q6PD62 1173 aa21.22■□□□□ 0.99
SF1-212ENST00000463343 ANKRD23Q86SG2 305 aa21.22■□□□□ 0.99
SF1-212ENST00000463343 SIPA1L1O43166 1804 aa21.22■□□□□ 0.99
SF1-212ENST00000463343 SMIM22K7EJ46 135 aa21.21■□□□□ 0.99
SF1-212ENST00000463343 JAG1P78504 1218 aa21.21■□□□□ 0.99
SF1-212ENST00000463343 GABPAQ06546 454 aa21.21■□□□□ 0.99
SF1-212ENST00000463343 MCMDC2Q4G0Z9 681 aa21.21■□□□□ 0.99
SF1-212ENST00000463343 GIMAP6Q6P9H5 292 aa21.21■□□□□ 0.99
SF1-212ENST00000463343 TRIM34Q9BYJ4 488 aa21.21■□□□□ 0.99
SF1-212ENST00000463343 PTPRAP18433 802 aa21.2■□□□□ 0.98
SF1-212ENST00000463343 TATDN1Q6P1N9 297 aa21.2■□□□□ 0.98
SF1-212ENST00000463343 IFNL3Q8IZI9 196 aa21.2■□□□□ 0.98
SF1-212ENST00000463343 DDRGK1Q96HY6 314 aa21.2■□□□□ 0.98
SF1-212ENST00000463343 EPB41L4AQ9HCS5 686 aaPredicted RBP21.2■□□□□ 0.98
SF1-212ENST00000463343 PICK1Q9NRD5 415 aa21.2■□□□□ 0.98
SF1-212ENST00000463343 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.2■□□□□ 0.98
SF1-212ENST00000463343 CEP290O15078 2479 aa21.2■□□□□ 0.98
SF1-212ENST00000463343 FOXP2O15409 715 aa21.19■□□□□ 0.98
SF1-212ENST00000463343 APPP05067 770 aa21.19■□□□□ 0.98
SF1-212ENST00000463343 HOXD10P28358 340 aa21.19■□□□□ 0.98
SF1-212ENST00000463343 SHMT1P34896 483 aa21.19■□□□□ 0.98
SF1-212ENST00000463343 SBK1Q52WX2 424 aa21.19■□□□□ 0.98
SF1-212ENST00000463343 DYNLL2Q96FJ2 89 aa21.19■□□□□ 0.98
SF1-212ENST00000463343 ZHX2Q9Y6X8 837 aa21.19■□□□□ 0.98
SF1-212ENST00000463343 CXCL11O14625 94 aa21.18■□□□□ 0.98
SF1-212ENST00000463343 SHROOM1Q2M3G4 852 aaPredicted RBP21.18■□□□□ 0.98
SF1-212ENST00000463343 VPS53Q5VIR6 699 aa21.18■□□□□ 0.98
SF1-212ENST00000463343 CCDC84Q86UT8 332 aaPredicted RBP21.18■□□□□ 0.98
SF1-212ENST00000463343 ARHGAP39Q9C0H5 1083 aa21.18■□□□□ 0.98
SF1-212ENST00000463343 HIP1O00291 1037 aa21.17■□□□□ 0.98
SF1-212ENST00000463343 GDF11O95390 407 aa21.17■□□□□ 0.98
SF1-212ENST00000463343 CWC27Q6UX04 472 aaKnown RBP21.17■□□□□ 0.98
SF1-212ENST00000463343 ZNF589Q86UQ0 364 aaPredicted RBP21.17■□□□□ 0.98
SF1-212ENST00000463343 AMOTL1Q8IY63 956 aa21.17■□□□□ 0.98
SF1-212ENST00000463343 SLC44A5Q8NCS7 719 aa21.17■□□□□ 0.98
SF1-212ENST00000463343 DIAPH3Q9NSV4 1193 aa21.17■□□□□ 0.98
SF1-212ENST00000463343 SRRDQ9UH36 339 aa21.17■□□□□ 0.98
SF1-212ENST00000463343 DDX60LQ5H9U9 1706 aaKnown RBP21.17■□□□□ 0.98
SF1-212ENST00000463343 NAV1Q8NEY1 1877 aa21.17■□□□□ 0.98
SF1-212ENST00000463343 BAZ2AQ9UIF9 1905 aaKnown RBP21.16■□□□□ 0.98
SF1-212ENST00000463343 ADGRA2Q96PE1 1338 aa21.16■□□□□ 0.98
SF1-212ENST00000463343 MINDY4BA8MYZ0 360 aa21.16■□□□□ 0.98
SF1-212ENST00000463343 PDHXO00330 501 aa21.16■□□□□ 0.98
SF1-212ENST00000463343 MOGSQ13724 837 aa21.16■□□□□ 0.98
SF1-212ENST00000463343 CERKLQ49MI3 558 aaPredicted RBP21.16■□□□□ 0.98
SF1-212ENST00000463343 NACAP1Q9BZK3 213 aa21.16■□□□□ 0.98
SF1-212ENST00000463343 ARPP21Q9UBL0 812 aaPredicted RBP21.16■□□□□ 0.98
SF1-212ENST00000463343 AFG3L2Q9Y4W6 797 aa21.16■□□□□ 0.98
SF1-212ENST00000463343 PSMC4P43686 418 aa21.15■□□□□ 0.98
SF1-212ENST00000463343 TDO2P48775 406 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms