RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 CHMP4CQ96CF2 233 aa13.19□□□□□ -0.3
TRAPPC3-205ENST00000462715 DBNDD2Q9BQY9 259 aa13.19□□□□□ -0.3
TRAPPC3-205ENST00000462715 CCDC8Q9H0W5 538 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC3-205ENST00000462715 SH2B1Q9NRF2 756 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC3-205ENST00000462715 DNAI1Q9UI46 699 aa13.19□□□□□ -0.3
TRAPPC3-205ENST00000462715 CCDC69A6NI79 296 aa13.18□□□□□ -0.3
TRAPPC3-205ENST00000462715 USP27XA6NNY8 438 aa13.18□□□□□ -0.3
TRAPPC3-205ENST00000462715 GOLGA6L19H0YKK7 550 aa13.18□□□□□ -0.3
TRAPPC3-205ENST00000462715 PSMD14O00487 310 aa13.18□□□□□ -0.3
TRAPPC3-205ENST00000462715 CTAGE5O15320 804 aa13.18□□□□□ -0.3
TRAPPC3-205ENST00000462715 UQCRFS1P1P0C7P4 283 aa13.18□□□□□ -0.3
TRAPPC3-205ENST00000462715 PHKA1P46020 1223 aa13.18□□□□□ -0.3
TRAPPC3-205ENST00000462715 GTF2IP78347 998 aa13.18□□□□□ -0.3
TRAPPC3-205ENST00000462715 TTC39AQ5SRH9 613 aa13.18□□□□□ -0.3
TRAPPC3-205ENST00000462715 TTLL5Q6EMB2 1281 aa13.18□□□□□ -0.3
TRAPPC3-205ENST00000462715 CC2D1AQ6P1N0 951 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC3-205ENST00000462715 ZSCAN16Q9H4T2 348 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC3-205ENST00000462715 DBNLQ9UJU6 430 aaKnown RBP13.18□□□□□ -0.3
TRAPPC3-205ENST00000462715 MTMR6Q9Y217 621 aa13.18□□□□□ -0.3
TRAPPC3-205ENST00000462715 MYO3BQ8WXR4 1341 aa13.18□□□□□ -0.3
TRAPPC3-205ENST00000462715 PSME4Q14997 1843 aa13.18□□□□□ -0.3
TRAPPC3-205ENST00000462715 SCN9AQ15858 1988 aa13.18□□□□□ -0.3
TRAPPC3-205ENST00000462715 EIF3CLB5ME19 914 aaKnown RBP13.18□□□□□ -0.3
TRAPPC3-205ENST00000462715 TADA3O75528 432 aa13.18□□□□□ -0.3
TRAPPC3-205ENST00000462715 VIL1P09327 827 aaKnown RBP13.18□□□□□ -0.3
TRAPPC3-205ENST00000462715 RPS12P25398 132 aaKnown RBP13.18□□□□□ -0.3
TRAPPC3-205ENST00000462715 C16orf71Q8IYS4 520 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC3-205ENST00000462715 TTC14Q96N46 770 aa13.18□□□□□ -0.3
TRAPPC3-205ENST00000462715 EIF3CQ99613 913 aaKnown RBP13.18□□□□□ -0.3
TRAPPC3-205ENST00000462715 KCNQ5Q9NR82 932 aa13.18□□□□□ -0.3
TRAPPC3-205ENST00000462715 DENND2AQ9ULE3 1009 aa13.18□□□□□ -0.3
TRAPPC3-205ENST00000462715 IQSEC3Q9UPP2 1182 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC3-205ENST00000462715 FAM205AQ6ZU69 1335 aa13.17□□□□□ -0.3
TRAPPC3-205ENST00000462715 KIF3CO14782 793 aa13.17□□□□□ -0.3
TRAPPC3-205ENST00000462715 DDNO94850 711 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC3-205ENST00000462715 LRRFIP1Q32MZ4 808 aaKnown RBP13.17□□□□□ -0.3
TRAPPC3-205ENST00000462715 RSBN1LQ6PCB5 846 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC3-205ENST00000462715 GPATCH3Q96I76 525 aa13.17□□□□□ -0.3
TRAPPC3-205ENST00000462715 DRC1Q96MC2 740 aa13.17□□□□□ -0.3
TRAPPC3-205ENST00000462715 ARFGAP3Q9NP61 516 aa13.17□□□□□ -0.3
TRAPPC3-205ENST00000462715 TLR7Q9NYK1 1049 aaKnown RBP13.17□□□□□ -0.3
TRAPPC3-205ENST00000462715 A0A087WUV0 522 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC3-205ENST00000462715 ARID4AP29374 1257 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC3-205ENST00000462715 DACT2Q5SW24 774 aa13.17□□□□□ -0.3
TRAPPC3-205ENST00000462715 DHX37Q8IY37 1157 aaKnown RBP13.17□□□□□ -0.3
TRAPPC3-205ENST00000462715 TBC1D22AQ8WUA7 517 aa13.17□□□□□ -0.3
TRAPPC3-205ENST00000462715 PALD1Q9ULE6 856 aa13.17□□□□□ -0.3
TRAPPC3-205ENST00000462715 SALL3Q9BXA9 1300 aa13.16□□□□□ -0.3
TRAPPC3-205ENST00000462715 SGSM2O43147 1006 aa13.16□□□□□ -0.3
TRAPPC3-205ENST00000462715 CHMLP26374 656 aa13.16□□□□□ -0.3
TRAPPC3-205ENST00000462715 LMOD1P29536 600 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC3-205ENST00000462715 ETF1P62495 437 aaKnown RBP13.16□□□□□ -0.3
TRAPPC3-205ENST00000462715 FKBP1AP62942 108 aaKnown RBP13.16□□□□□ -0.3
TRAPPC3-205ENST00000462715 IQCB1Q15051 598 aa13.16□□□□□ -0.3
TRAPPC3-205ENST00000462715 BRD3Q15059 726 aa13.16□□□□□ -0.3
TRAPPC3-205ENST00000462715 AGBL3Q8NEM8 1001 aa13.16□□□□□ -0.3
TRAPPC3-205ENST00000462715 ANKRD20A12PQ8NF67 263 aa13.16□□□□□ -0.3
TRAPPC3-205ENST00000462715 WDR66Q8TBY9 1149 aa13.16□□□□□ -0.3
TRAPPC3-205ENST00000462715 STAG1Q8WVM7 1258 aa13.16□□□□□ -0.3
TRAPPC3-205ENST00000462715 HNRNPLLQ8WVV9 542 aaKnown RBP13.16□□□□□ -0.3
TRAPPC3-205ENST00000462715 L3MBTL3Q96JM7 780 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC3-205ENST00000462715 ZNF512BQ96KM6 892 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC3-205ENST00000462715 A1CFQ9NQ94 594 aaKnown RBP13.16□□□□□ -0.3
TRAPPC3-205ENST00000462715 MYH13Q9UKX3 1938 aa13.16□□□□□ -0.3
TRAPPC3-205ENST00000462715 PDS5AQ29RF7 1337 aaKnown RBP13.16□□□□□ -0.3
TRAPPC3-205ENST00000462715 IQCA1LA6NCM1 817 aa13.15□□□□□ -0.3
TRAPPC3-205ENST00000462715 PDCP20941 246 aa13.15□□□□□ -0.3
TRAPPC3-205ENST00000462715 MAP2K2P36507 400 aa13.15□□□□□ -0.3
TRAPPC3-205ENST00000462715 GMPSP49915 693 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC3-205ENST00000462715 DNM1Q05193 864 aaKnown RBP13.15□□□□□ -0.3
TRAPPC3-205ENST00000462715 DPF2Q92785 391 aa13.15□□□□□ -0.3
TRAPPC3-205ENST00000462715 TMX1Q9H3N1 280 aa13.15□□□□□ -0.3
TRAPPC3-205ENST00000462715 KCNG1Q9UIX4 513 aa13.15□□□□□ -0.3
TRAPPC3-205ENST00000462715 MAP2K7O14733 419 aa13.15□□□□□ -0.3
TRAPPC3-205ENST00000462715 RASGRF1Q13972 1273 aa13.15□□□□□ -0.3
TRAPPC3-205ENST00000462715 EGFL6Q8IUX8 553 aa13.15□□□□□ -0.3
TRAPPC3-205ENST00000462715 ZNF526Q8TF50 670 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC3-205ENST00000462715 PPP1R13BQ96KQ4 1090 aa13.15□□□□□ -0.3
TRAPPC3-205ENST00000462715 STAP2Q9UGK3 403 aa13.15□□□□□ -0.3
TRAPPC3-205ENST00000462715 WDR90Q96KV7 1748 aa13.15□□□□□ -0.3
TRAPPC3-205ENST00000462715 MFSD14BQ5SR56 506 aa13.14□□□□□ -0.31
TRAPPC3-205ENST00000462715 FCHSD1Q86WN1 690 aa13.14□□□□□ -0.31
TRAPPC3-205ENST00000462715 SPATA5Q8NB90 893 aa13.14□□□□□ -0.31
TRAPPC3-205ENST00000462715 GPBP1L1Q9HC44 474 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC3-205ENST00000462715 SUFUQ9UMX1 484 aa13.14□□□□□ -0.31
TRAPPC3-205ENST00000462715 JAG2Q9Y219 1238 aa13.14□□□□□ -0.31
TRAPPC3-205ENST00000462715 ZBTB12Q9Y330 459 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC3-205ENST00000462715 POTEB2H3BUK9 544 aa13.14□□□□□ -0.31
TRAPPC3-205ENST00000462715 TDO2P48775 406 aa13.14□□□□□ -0.31
TRAPPC3-205ENST00000462715 LMAN1P49257 510 aa13.14□□□□□ -0.31
TRAPPC3-205ENST00000462715 FOXD4L6Q3SYB3 417 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC3-205ENST00000462715 FOXD4L3Q6VB84 417 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC3-205ENST00000462715 GPATCH11Q8N954 259 aa13.14□□□□□ -0.31
TRAPPC3-205ENST00000462715 OTUD7AQ8TE49 926 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC3-205ENST00000462715 RABGGTAQ92696 567 aa13.14□□□□□ -0.31
TRAPPC3-205ENST00000462715 CCDC151A5D8V7 595 aa13.13□□□□□ -0.31
TRAPPC3-205ENST00000462715 EIF3JO75822 258 aaKnown RBP13.13□□□□□ -0.31
TRAPPC3-205ENST00000462715 OGFOD1Q8N543 542 aa13.13□□□□□ -0.31
TRAPPC3-205ENST00000462715 FUT8Q9BYC5 575 aa13.13□□□□□ -0.31
TRAPPC3-205ENST00000462715 ANO2Q9NQ90 1003 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms