RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 TNRC18O15417 2968 aaPredicted RBP12.3□□□□□ -0.44
SF3A3-204ENST00000462258 ECM2O94769 699 aaPredicted RBP12.3□□□□□ -0.44
SF3A3-204ENST00000462258 BCRP11274 1271 aa12.3□□□□□ -0.44
SF3A3-204ENST00000462258 HMGCS2P54868 508 aa12.3□□□□□ -0.44
SF3A3-204ENST00000462258 MTMR2Q13614 643 aa12.3□□□□□ -0.44
SF3A3-204ENST00000462258 TTC6Q86TZ1 520 aa12.3□□□□□ -0.44
SF3A3-204ENST00000462258 SDR42E1Q8WUS8 393 aa12.3□□□□□ -0.44
SF3A3-204ENST00000462258 GINM1Q9NU53 330 aa12.3□□□□□ -0.44
SF3A3-204ENST00000462258 SERPINB13Q9UIV8 391 aa12.3□□□□□ -0.44
SF3A3-204ENST00000462258 PNMA3Q9UL41 463 aa12.3□□□□□ -0.44
SF3A3-204ENST00000462258 PTCH2Q9Y6C5 1203 aa12.3□□□□□ -0.44
SF3A3-204ENST00000462258 MBD4O95243 580 aa12.29□□□□□ -0.44
SF3A3-204ENST00000462258 GNRH1P01148 92 aa12.29□□□□□ -0.44
SF3A3-204ENST00000462258 JAG1P78504 1218 aa12.29□□□□□ -0.44
SF3A3-204ENST00000462258 TSHZ3Q63HK5 1081 aa12.29□□□□□ -0.44
SF3A3-204ENST00000462258 ARMC5Q96C12 935 aa12.29□□□□□ -0.44
SF3A3-204ENST00000462258 WDR18Q9BV38 432 aa12.29□□□□□ -0.44
SF3A3-204ENST00000462258 ARMT1Q9H993 441 aa12.29□□□□□ -0.44
SF3A3-204ENST00000462258 GH2P01242 217 aa12.28□□□□□ -0.44
SF3A3-204ENST00000462258 CHGBP05060 677 aa12.28□□□□□ -0.44
SF3A3-204ENST00000462258 POLR3DP05423 398 aaPredicted RBP12.28□□□□□ -0.44
SF3A3-204ENST00000462258 CTGFP29279 349 aa12.28□□□□□ -0.44
SF3A3-204ENST00000462258 PSMC4P43686 418 aa12.28□□□□□ -0.44
SF3A3-204ENST00000462258 PLCD1P51178 756 aa12.28□□□□□ -0.44
SF3A3-204ENST00000462258 PABPC4Q13310 644 aaKnown RBP eCLIP12.28□□□□□ -0.44
SF3A3-204ENST00000462258 UBE3CQ15386 1083 aa12.28□□□□□ -0.44
SF3A3-204ENST00000462258 SLFNL1Q499Z3 407 aa12.28□□□□□ -0.44
SF3A3-204ENST00000462258 SLC9C1Q4G0N8 1177 aa12.28□□□□□ -0.44
SF3A3-204ENST00000462258 SH3D19Q5HYK7 790 aa12.28□□□□□ -0.44
SF3A3-204ENST00000462258 ZSCAN25Q6NSZ9 544 aa12.28□□□□□ -0.44
SF3A3-204ENST00000462258 TATDN1Q6P1N9 297 aa12.28□□□□□ -0.44
SF3A3-204ENST00000462258 TRIM47Q96LD4 638 aa12.28□□□□□ -0.44
SF3A3-204ENST00000462258 DCP1AQ9NPI6 582 aaPredicted RBP12.28□□□□□ -0.44
SF3A3-204ENST00000462258 MCM9Q9NXL9 1143 aa12.28□□□□□ -0.44
SF3A3-204ENST00000462258 MYPNQ86TC9 1320 aa12.28□□□□□ -0.44
SF3A3-204ENST00000462258 FMNL1O95466 1100 aaPredicted RBP12.27□□□□□ -0.45
SF3A3-204ENST00000462258 OSBPP22059 807 aa12.27□□□□□ -0.45
SF3A3-204ENST00000462258 SHMT1P34896 483 aa12.27□□□□□ -0.45
SF3A3-204ENST00000462258 PRMT2P55345 433 aa12.27□□□□□ -0.45
SF3A3-204ENST00000462258 FCGRTP55899 365 aa12.27□□□□□ -0.45
SF3A3-204ENST00000462258 BACE1P56817 501 aa12.27□□□□□ -0.45
SF3A3-204ENST00000462258 TMOD4Q9NZQ9 345 aa12.27□□□□□ -0.45
SF3A3-204ENST00000462258 TTC41PQ6P2S7 1318 aa12.27□□□□□ -0.45
SF3A3-204ENST00000462258 USP17L10C9JJH3 530 aa12.26□□□□□ -0.45
SF3A3-204ENST00000462258 EVX2Q03828 476 aa12.26□□□□□ -0.45
SF3A3-204ENST00000462258 GABPAQ06546 454 aa12.26□□□□□ -0.45
SF3A3-204ENST00000462258 FAM110CQ1W6H9 321 aa12.26□□□□□ -0.45
SF3A3-204ENST00000462258 ABCB5Q2M3G0 1257 aa12.26□□□□□ -0.45
SF3A3-204ENST00000462258 CERKLQ49MI3 558 aaPredicted RBP12.26□□□□□ -0.45
SF3A3-204ENST00000462258 ANKRD13CQ8N6S4 541 aa12.26□□□□□ -0.45
SF3A3-204ENST00000462258 KBTBD3Q8NAB2 608 aa12.26□□□□□ -0.45
SF3A3-204ENST00000462258 ZNF333Q96JL9 665 aa12.26□□□□□ -0.45
SF3A3-204ENST00000462258 FEZ1Q99689 392 aa12.26□□□□□ -0.45
SF3A3-204ENST00000462258 ASCC2Q9H1I8 757 aaPredicted RBP12.26□□□□□ -0.45
SF3A3-204ENST00000462258 SRRDQ9UH36 339 aa12.26□□□□□ -0.45
SF3A3-204ENST00000462258 A0A0G2JMZ2 1700 aa12.25□□□□□ -0.45
SF3A3-204ENST00000462258 GREB1LQ9C091 1923 aaPredicted RBP12.25□□□□□ -0.45
SF3A3-204ENST00000462258 KIAA0100Q14667 2235 aaKnown RBP12.25□□□□□ -0.45
SF3A3-204ENST00000462258 C19orf81C9J6K1 198 aa12.25□□□□□ -0.45
SF3A3-204ENST00000462258 PRKAB2O43741 272 aa12.25□□□□□ -0.45
SF3A3-204ENST00000462258 CYP2D6P10635 497 aa12.25□□□□□ -0.45
SF3A3-204ENST00000462258 HOXD10P28358 340 aa12.25□□□□□ -0.45
SF3A3-204ENST00000462258 GCLCP48506 637 aaPredicted RBP12.25□□□□□ -0.45
SF3A3-204ENST00000462258 IRX3P78415 501 aaPredicted RBP12.25□□□□□ -0.45
SF3A3-204ENST00000462258 PRKCZQ05513 592 aa12.25□□□□□ -0.45
SF3A3-204ENST00000462258 RAB3GAP1Q15042 981 aa12.25□□□□□ -0.45
SF3A3-204ENST00000462258 NBPF11Q86T75 865 aa12.25□□□□□ -0.45
SF3A3-204ENST00000462258 AMOTL1Q8IY63 956 aa12.25□□□□□ -0.45
SF3A3-204ENST00000462258 OTUD7AQ8TE49 926 aaPredicted RBP12.25□□□□□ -0.45
SF3A3-204ENST00000462258 SH3TC2Q8TF17 1288 aa12.25□□□□□ -0.45
SF3A3-204ENST00000462258 DDRGK1Q96HY6 314 aa12.25□□□□□ -0.45
SF3A3-204ENST00000462258 PUS7LQ9H0K6 701 aaKnown RBP12.25□□□□□ -0.45
SF3A3-204ENST00000462258 CABP5Q9NP86 173 aa12.25□□□□□ -0.45
SF3A3-204ENST00000462258 ATP8A2Q9NTI2 1148 aa12.25□□□□□ -0.45
SF3A3-204ENST00000462258 PLXNB2O15031 1838 aa12.25□□□□□ -0.45
SF3A3-204ENST00000462258 PDE4DIPQ5VU43 2346 aa12.25□□□□□ -0.45
SF3A3-204ENST00000462258 POTEFA5A3E0 1075 aa12.24□□□□□ -0.45
SF3A3-204ENST00000462258 TNPO2O14787 897 aaKnown RBP12.24□□□□□ -0.45
SF3A3-204ENST00000462258 ERC2O15083 957 aa12.24□□□□□ -0.45
SF3A3-204ENST00000462258 MX1P20591 662 aa12.24□□□□□ -0.45
SF3A3-204ENST00000462258 HDAC1Q13547 482 aaPredicted RBP12.24□□□□□ -0.45
SF3A3-204ENST00000462258 ZYXQ15942 572 aaKnown RBP12.24□□□□□ -0.45
SF3A3-204ENST00000462258 PARP14Q460N5 1801 aa12.24□□□□□ -0.45
SF3A3-204ENST00000462258 USP17L2Q6R6M4 530 aa12.24□□□□□ -0.45
SF3A3-204ENST00000462258 DOCK3Q8IZD9 2030 aa12.24□□□□□ -0.45
SF3A3-204ENST00000462258 SLC44A5Q8NCS7 719 aa12.24□□□□□ -0.45
SF3A3-204ENST00000462258 PI4K2BQ8TCG2 481 aa12.24□□□□□ -0.45
SF3A3-204ENST00000462258 RAET1EQ8TD07 263 aa12.24□□□□□ -0.45
SF3A3-204ENST00000462258 APPBP2Q92624 585 aa12.24□□□□□ -0.45
SF3A3-204ENST00000462258 C12orf42Q96LP6 360 aa12.24□□□□□ -0.45
SF3A3-204ENST00000462258 ZBTB47Q9UFB7 747 aaPredicted RBP12.24□□□□□ -0.45
SF3A3-204ENST00000462258 SWAP70Q9UH65 585 aa12.24□□□□□ -0.45
SF3A3-204ENST00000462258 SLC4A4Q9Y6R1 1079 aa12.24□□□□□ -0.45
SF3A3-204ENST00000462258 SALL3Q9BXA9 1300 aa12.23□□□□□ -0.45
SF3A3-204ENST00000462258 MPHOSPH10O00566 681 aaKnown RBP12.23□□□□□ -0.45
SF3A3-204ENST00000462258 GLRX3O76003 335 aaKnown RBP12.23□□□□□ -0.45
SF3A3-204ENST00000462258 HOXA7P31268 230 aaPredicted RBP12.23□□□□□ -0.45
SF3A3-204ENST00000462258 USP14P54578 494 aa12.23□□□□□ -0.45
SF3A3-204ENST00000462258 GCC1Q96CN9 775 aa12.23□□□□□ -0.45
SF3A3-204ENST00000462258 DYNLL2Q96FJ2 89 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms