RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 SYT9Q86SS6 491 aa6.56□□□□□ -1.36
SF3A3-202ENST00000460925 DHX38Q92620 1227 aaKnown RBP6.56□□□□□ -1.36
SF3A3-202ENST00000460925 RBSNQ9H1K0 784 aa6.56□□□□□ -1.36
SF3A3-202ENST00000460925 RASSF4Q9H2L5 321 aa6.56□□□□□ -1.36
SF3A3-202ENST00000460925 SEC31BQ9NQW1 1179 aa6.56□□□□□ -1.36
SF3A3-202ENST00000460925 RGPD2P0DJD1 1756 aa6.55□□□□□ -1.36
SF3A3-202ENST00000460925 ADARB2-AS1A8MUL3 147 aa6.55□□□□□ -1.36
SF3A3-202ENST00000460925 METTL12A8MUP2 240 aa6.55□□□□□ -1.36
SF3A3-202ENST00000460925 J3QW42 95 aa6.55□□□□□ -1.36
SF3A3-202ENST00000460925 C2CD2LO14523 706 aa6.55□□□□□ -1.36
SF3A3-202ENST00000460925 GHRHP01286 108 aa6.55□□□□□ -1.36
SF3A3-202ENST00000460925 SNRPBP14678 240 aaKnown RBP6.55□□□□□ -1.36
SF3A3-202ENST00000460925 GTF2F1P35269 517 aaKnown RBP eCLIP6.55□□□□□ -1.36
SF3A3-202ENST00000460925 RBM10P98175 930 aaKnown RBP6.55□□□□□ -1.36
SF3A3-202ENST00000460925 LMNB2Q03252 620 aa6.55□□□□□ -1.36
SF3A3-202ENST00000460925 FAAP100Q0VG06 881 aa6.55□□□□□ -1.36
SF3A3-202ENST00000460925 COL9A2Q14055 689 aaPredicted RBP6.55□□□□□ -1.36
SF3A3-202ENST00000460925 TPTE2Q6XPS3 522 aa6.55□□□□□ -1.36
SF3A3-202ENST00000460925 AGMOQ6ZNB7 445 aa6.55□□□□□ -1.36
SF3A3-202ENST00000460925 SV2AQ7L0J3 742 aa6.55□□□□□ -1.36
SF3A3-202ENST00000460925 ZNF296Q8WUU4 475 aaPredicted RBP6.55□□□□□ -1.36
SF3A3-202ENST00000460925 BSNDQ8WZ55 320 aa6.55□□□□□ -1.36
SF3A3-202ENST00000460925 POP1Q99575 1024 aaKnown RBP6.55□□□□□ -1.36
SF3A3-202ENST00000460925 KNSTRNQ9Y448 316 aa6.55□□□□□ -1.36
SF3A3-202ENST00000460925 NFAT5O94916 1531 aa6.55□□□□□ -1.36
SF3A3-202ENST00000460925 SHPRHQ149N8 1683 aa6.55□□□□□ -1.36
SF3A3-202ENST00000460925 CGNL1Q0VF96 1302 aa6.54□□□□□ -1.36
SF3A3-202ENST00000460925 FYB1O15117 783 aa6.54□□□□□ -1.36
SF3A3-202ENST00000460925 FBXO24O75426 580 aa6.54□□□□□ -1.36
SF3A3-202ENST00000460925 SMNDC1O75940 238 aaKnown RBP eCLIP6.54□□□□□ -1.36
SF3A3-202ENST00000460925 CELA3AP09093 270 aa6.54□□□□□ -1.36
SF3A3-202ENST00000460925 ARAFP10398 606 aa6.54□□□□□ -1.36
SF3A3-202ENST00000460925 ATP11AP98196 1134 aa6.54□□□□□ -1.36
SF3A3-202ENST00000460925 FBXL19Q6PCT2 694 aa6.54□□□□□ -1.36
SF3A3-202ENST00000460925 CCDC84Q86UT8 332 aaPredicted RBP6.54□□□□□ -1.36
SF3A3-202ENST00000460925 VWA5B2Q8N398 1253 aa6.54□□□□□ -1.36
SF3A3-202ENST00000460925 EAF1Q96JC9 268 aaPredicted RBP6.54□□□□□ -1.36
SF3A3-202ENST00000460925 DNAJC2Q99543 621 aaKnown RBP6.54□□□□□ -1.36
SF3A3-202ENST00000460925 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.54□□□□□ -1.366e-8■■■■□ 23.4
SF3A3-202ENST00000460925 UBE2OQ9C0C9 1292 aaKnown RBP6.54□□□□□ -1.36
SF3A3-202ENST00000460925 LNPKQ9C0E8 428 aa6.54□□□□□ -1.36
SF3A3-202ENST00000460925 CLEC4MQ9H2X3 399 aaPredicted RBP6.54□□□□□ -1.36
SF3A3-202ENST00000460925 FRRS1LQ9P0K9 344 aa6.54□□□□□ -1.36
SF3A3-202ENST00000460925 SUPT16HQ9Y5B9 1047 aaKnown RBP6.54□□□□□ -1.36
SF3A3-202ENST00000460925 SLIT3O75094 1523 aa6.54□□□□□ -1.36
SF3A3-202ENST00000460925 PNPLA6Q8IY17 1366 aa6.54□□□□□ -1.36
SF3A3-202ENST00000460925 COL22A1Q8NFW1 1626 aaPredicted RBP6.54□□□□□ -1.36
SF3A3-202ENST00000460925 SPATA31A3Q5VYP0 1347 aa6.53□□□□□ -1.36
SF3A3-202ENST00000460925 A0A0U1RQG5 324 aaPredicted RBP6.53□□□□□ -1.36
SF3A3-202ENST00000460925 MINDY4BA8MYZ0 360 aa6.53□□□□□ -1.36
SF3A3-202ENST00000460925 BMP4P12644 408 aa6.53□□□□□ -1.36
SF3A3-202ENST00000460925 CANXP27824 592 aaKnown RBP6.53□□□□□ -1.36
SF3A3-202ENST00000460925 HSPA1LP34931 641 aa6.53□□□□□ -1.36
SF3A3-202ENST00000460925 SOX9P48436 509 aa6.53□□□□□ -1.36
SF3A3-202ENST00000460925 IRX6P78412 446 aaPredicted RBP6.53□□□□□ -1.36
SF3A3-202ENST00000460925 MLLT1Q03111 559 aaPredicted RBP6.53□□□□□ -1.36
SF3A3-202ENST00000460925 CAMK2GQ13555 558 aaPredicted RBP6.53□□□□□ -1.36
SF3A3-202ENST00000460925 RRS1Q15050 365 aaKnown RBP6.53□□□□□ -1.36
SF3A3-202ENST00000460925 TTBK2Q6IQ55 1244 aa6.53□□□□□ -1.36
SF3A3-202ENST00000460925 NOP9Q86U38 636 aaKnown RBP6.53□□□□□ -1.36
SF3A3-202ENST00000460925 TTC9Q92623 222 aa6.53□□□□□ -1.36
SF3A3-202ENST00000460925 ADAM19Q9H013 955 aa6.53□□□□□ -1.36
SF3A3-202ENST00000460925 MUC3BQ9H195 1237 aa6.53□□□□□ -1.36
SF3A3-202ENST00000460925 TMEM39AQ9NV64 488 aa6.53□□□□□ -1.36
SF3A3-202ENST00000460925 KLF15Q9UIH9 416 aa6.53□□□□□ -1.36
SF3A3-202ENST00000460925 STRIP2Q9ULQ0 834 aa6.53□□□□□ -1.36
SF3A3-202ENST00000460925 SLC6A14Q9UN76 642 aa6.53□□□□□ -1.36
SF3A3-202ENST00000460925 SOX13Q9UN79 622 aa6.53□□□□□ -1.36
SF3A3-202ENST00000460925 SBNO1A3KN83 1393 aa6.53□□□□□ -1.36
SF3A3-202ENST00000460925 PARD3Q8TEW0 1356 aa6.53□□□□□ -1.36
SF3A3-202ENST00000460925 TTC21AQ8NDW8 1320 aa6.52□□□□□ -1.37
SF3A3-202ENST00000460925 PLCH1Q4KWH8 1693 aa6.52□□□□□ -1.37
SF3A3-202ENST00000460925 LRP6O75581 1613 aa6.52□□□□□ -1.37
SF3A3-202ENST00000460925 CDC14CA4D256 554 aa6.52□□□□□ -1.37
SF3A3-202ENST00000460925 GPR25O00155 361 aa6.52□□□□□ -1.37
SF3A3-202ENST00000460925 B3GALT4O96024 378 aa6.52□□□□□ -1.37
SF3A3-202ENST00000460925 PF4P02776 101 aa6.52□□□□□ -1.37
SF3A3-202ENST00000460925 EIF2AK2P19525 551 aaKnown RBP6.52□□□□□ -1.37
SF3A3-202ENST00000460925 CCDC184Q52MB2 194 aa6.52□□□□□ -1.37
SF3A3-202ENST00000460925 CEP135Q66GS9 1140 aa6.52□□□□□ -1.37
SF3A3-202ENST00000460925 HFE2Q6ZVN8 426 aa6.52□□□□□ -1.37
SF3A3-202ENST00000460925 VN1R5Q7Z5H4 357 aa6.52□□□□□ -1.37
SF3A3-202ENST00000460925 TRIM42Q8IWZ5 723 aa6.52□□□□□ -1.37
SF3A3-202ENST00000460925 CACTIN-AS1Q8N1I8 211 aa6.52□□□□□ -1.37
SF3A3-202ENST00000460925 ASAP3Q8TDY4 903 aa6.52□□□□□ -1.37
SF3A3-202ENST00000460925 PLD4Q96BZ4 506 aa6.52□□□□□ -1.37
SF3A3-202ENST00000460925 LRRC3Q9BY71 257 aa6.52□□□□□ -1.37
SF3A3-202ENST00000460925 IRX2Q9BZI1 471 aaPredicted RBP6.52□□□□□ -1.37
SF3A3-202ENST00000460925 PRKRIP1Q9H875 184 aaPredicted RBP6.52□□□□□ -1.37
SF3A3-202ENST00000460925 TLR6Q9Y2C9 796 aa6.52□□□□□ -1.37
SF3A3-202ENST00000460925 COL18A1P39060 1754 aa6.52□□□□□ -1.37
SF3A3-202ENST00000460925 USP19O94966 1318 aa6.51□□□□□ -1.37
SF3A3-202ENST00000460925 PAGE1O75459 146 aa6.51□□□□□ -1.37
SF3A3-202ENST00000460925 PTPRAP18433 802 aa6.51□□□□□ -1.37
SF3A3-202ENST00000460925 TFE3P19532 575 aaPredicted RBP6.51□□□□□ -1.37
SF3A3-202ENST00000460925 MX2P20592 715 aa6.51□□□□□ -1.37
SF3A3-202ENST00000460925 ADH6P28332 368 aa6.51□□□□□ -1.37
SF3A3-202ENST00000460925 MAP2K3P46734 347 aa6.51□□□□□ -1.37
SF3A3-202ENST00000460925 PCBP4P57723 403 aaKnown RBP6.51□□□□□ -1.37
SF3A3-202ENST00000460925 PPP2R3AQ06190 1150 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms