RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 ARID4AP29374 1257 aaPredicted RBP15.52■□□□□ 0.08
TOP3B-213ENST00000457179 MSL1Q68DK7 614 aa15.52■□□□□ 0.08
TOP3B-213ENST00000457179 EP400NLQ6ZTU2 488 aa15.52■□□□□ 0.08
TOP3B-213ENST00000457179 CEP57L1Q8IYX8 460 aa15.52■□□□□ 0.08
TOP3B-213ENST00000457179 SDF4Q9BRK5 362 aa15.52■□□□□ 0.08
TOP3B-213ENST00000457179 XPO4Q9C0E2 1151 aaKnown RBP15.52■□□□□ 0.08
TOP3B-213ENST00000457179 NBPF3Q9H094 633 aa15.52■□□□□ 0.08
TOP3B-213ENST00000457179 ZSWIM4Q9H7M6 989 aa15.52■□□□□ 0.08
TOP3B-213ENST00000457179 ARFGAP3Q9NP61 516 aa15.52■□□□□ 0.08
TOP3B-213ENST00000457179 ZSWIM5Q9P217 1185 aa15.52■□□□□ 0.08
TOP3B-213ENST00000457179 CLIC4Q9Y696 253 aa15.52■□□□□ 0.08
TOP3B-213ENST00000457179 AHDC1Q5TGY3 1603 aaPredicted RBP15.52■□□□□ 0.08
TOP3B-213ENST00000457179 CAVIN2O95810 425 aa15.52■□□□□ 0.08
TOP3B-213ENST00000457179 ACTN2P35609 894 aa15.52■□□□□ 0.08
TOP3B-213ENST00000457179 STK38Q15208 465 aa15.52■□□□□ 0.08
TOP3B-213ENST00000457179 UBE3CQ15386 1083 aa15.52■□□□□ 0.08
TOP3B-213ENST00000457179 PTPN21Q16825 1174 aa15.52■□□□□ 0.08
TOP3B-213ENST00000457179 MFSD6Q6ZSS7 791 aa15.52■□□□□ 0.08
TOP3B-213ENST00000457179 LLPHQ9BRT6 129 aaKnown RBP15.52■□□□□ 0.08
TOP3B-213ENST00000457179 H3BQF6 201 aa15.52■□□□□ 0.07
TOP3B-213ENST00000457179 NAA16Q6N069 864 aaPredicted RBP15.52■□□□□ 0.07
TOP3B-213ENST00000457179 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.52■□□□□ 0.07
TOP3B-213ENST00000457179 NACAP1Q9BZK3 213 aa15.52■□□□□ 0.07
TOP3B-213ENST00000457179 PLEKHA4Q9H4M7 779 aa15.52■□□□□ 0.07
TOP3B-213ENST00000457179 RFX7Q2KHR2 1363 aa15.51■□□□□ 0.07
TOP3B-213ENST00000457179 MARCKSP29966 332 aaPredicted RBP15.51■□□□□ 0.07
TOP3B-213ENST00000457179 METAP2P50579 478 aaKnown RBP eCLIP15.51■□□□□ 0.072e-6■□□□□ 9
TOP3B-213ENST00000457179 MCM6Q14566 821 aa15.51■□□□□ 0.07
TOP3B-213ENST00000457179 GUCY2CP25092 1073 aa15.51■□□□□ 0.07
TOP3B-213ENST00000457179 GOLGA8FQ08AF8 430 aa15.51■□□□□ 0.07
TOP3B-213ENST00000457179 GOLGA8DPQ0D2H9 430 aa15.51■□□□□ 0.07
TOP3B-213ENST00000457179 ZNF396Q96N95 335 aaPredicted RBP15.51■□□□□ 0.07
TOP3B-213ENST00000457179 ANO10Q9NW15 660 aa15.51■□□□□ 0.07
TOP3B-213ENST00000457179 TRPC5Q9UL62 973 aaPredicted RBP15.51■□□□□ 0.07
TOP3B-213ENST00000457179 BAZ2BQ9UIF8 2168 aaKnown RBP15.5■□□□□ 0.07
TOP3B-213ENST00000457179 TJP1Q07157 1748 aa15.5■□□□□ 0.07
TOP3B-213ENST00000457179 GSG1L2A8MUP6 293 aa15.5■□□□□ 0.07
TOP3B-213ENST00000457179 OLFM4Q6UX06 510 aa15.5■□□□□ 0.07
TOP3B-213ENST00000457179 NCAPGQ9BPX3 1015 aa15.5■□□□□ 0.07
TOP3B-213ENST00000457179 BSDC1Q9NW68 430 aaPredicted RBP15.5■□□□□ 0.07
TOP3B-213ENST00000457179 PCDHA7Q9UN72 937 aa15.5■□□□□ 0.07
TOP3B-213ENST00000457179 MAGEB6P1A0A0J9YX57 407 aa15.5■□□□□ 0.07
TOP3B-213ENST00000457179 PATL2C9JE40 543 aaKnown RBP15.5■□□□□ 0.07
TOP3B-213ENST00000457179 F8W031 263 aaPredicted RBP15.5■□□□□ 0.07
TOP3B-213ENST00000457179 HIBADHP31937 336 aaKnown RBP15.5■□□□□ 0.07
TOP3B-213ENST00000457179 ZRSR1Q15695 479 aaKnown RBP15.5■□□□□ 0.07
TOP3B-213ENST00000457179 MB21D2Q8IYB1 491 aaPredicted RBP15.5■□□□□ 0.07
TOP3B-213ENST00000457179 RPGRQ92834 1020 aaKnown RBP15.5■□□□□ 0.07
TOP3B-213ENST00000457179 TAF1P21675 1872 aa15.5■□□□□ 0.07
TOP3B-213ENST00000457179 TCRBV5S4A2TA0A5A2 114 aa15.49■□□□□ 0.07
TOP3B-213ENST00000457179 EFCAB8A8MWE9 144 aa15.49■□□□□ 0.07
TOP3B-213ENST00000457179 RIMBP2O15034 1052 aa15.49■□□□□ 0.07
TOP3B-213ENST00000457179 FANCGO15287 622 aa15.49■□□□□ 0.07
TOP3B-213ENST00000457179 DIXDC1Q155Q3 683 aa15.49■□□□□ 0.07
TOP3B-213ENST00000457179 EXOC4Q96A65 974 aa15.49■□□□□ 0.07
TOP3B-213ENST00000457179 ZNF274Q96GC6 653 aaPredicted RBP15.49■□□□□ 0.07
TOP3B-213ENST00000457179 DEF6Q9H4E7 631 aa15.49■□□□□ 0.07
TOP3B-213ENST00000457179 RCOR1Q9UKL0 485 aa15.49■□□□□ 0.07
TOP3B-213ENST00000457179 ANGEL1Q9UNK9 670 aaKnown RBP15.49■□□□□ 0.07
TOP3B-213ENST00000457179 SLC12A7Q9Y666 1083 aa15.49■□□□□ 0.07
TOP3B-213ENST00000457179 PSDA5PKW4 1024 aaPredicted RBP15.49■□□□□ 0.07
TOP3B-213ENST00000457179 CCDC150Q8NCX0 1101 aa15.49■□□□□ 0.07
TOP3B-213ENST00000457179 NYXQ9GZU5 481 aa15.49■□□□□ 0.07
TOP3B-213ENST00000457179 KIF28PB7ZC32 967 aa15.49■□□□□ 0.07
TOP3B-213ENST00000457179 C6orf229H3BNL8 230 aa15.49■□□□□ 0.07
TOP3B-213ENST00000457179 SLC26A6Q9BXS9 759 aa15.49■□□□□ 0.07
TOP3B-213ENST00000457179 UBXN6Q9BZV1 441 aa15.49■□□□□ 0.07
TOP3B-213ENST00000457179 HPS5Q9UPZ3 1129 aa15.49■□□□□ 0.07
TOP3B-213ENST00000457179 NUP188Q5SRE5 1749 aa15.49■□□□□ 0.07
TOP3B-213ENST00000457179 NUP98P52948 1817 aa15.48■□□□□ 0.07
TOP3B-213ENST00000457179 EIF3CLB5ME19 914 aaKnown RBP15.48■□□□□ 0.07
TOP3B-213ENST00000457179 NDUFA8P51970 172 aa15.48■□□□□ 0.07
TOP3B-213ENST00000457179 EIF3CQ99613 913 aaKnown RBP15.48■□□□□ 0.07
TOP3B-213ENST00000457179 PARD6BQ9BYG5 372 aa15.48■□□□□ 0.07
TOP3B-213ENST00000457179 AGXT2Q9BYV1 514 aa15.48■□□□□ 0.07
TOP3B-213ENST00000457179 OSBPL5Q9H0X9 879 aaPredicted RBP15.48■□□□□ 0.07
TOP3B-213ENST00000457179 LRP6O75581 1613 aa15.48■□□□□ 0.07
TOP3B-213ENST00000457179 GOLGA8AA7E2F4 631 aa15.48■□□□□ 0.07
TOP3B-213ENST00000457179 USP17L12C9JPN9 530 aa15.48■□□□□ 0.07
TOP3B-213ENST00000457179 USP17L21D6R901 530 aa15.48■□□□□ 0.07
TOP3B-213ENST00000457179 ZBTB43O43298 467 aa15.48■□□□□ 0.07
TOP3B-213ENST00000457179 PHACTR2O75167 634 aa15.48■□□□□ 0.07
TOP3B-213ENST00000457179 CDC27P30260 824 aa15.48■□□□□ 0.07
TOP3B-213ENST00000457179 FAM47AQ5JRC9 791 aa15.48■□□□□ 0.07
TOP3B-213ENST00000457179 DZIP1Q86YF9 867 aaKnown RBP15.48■□□□□ 0.07
TOP3B-213ENST00000457179 UBAC1Q9BSL1 405 aa15.48■□□□□ 0.07
TOP3B-213ENST00000457179 PDE11AQ9HCR9 933 aa15.48■□□□□ 0.07
TOP3B-213ENST00000457179 TACC3Q9Y6A5 838 aa15.48■□□□□ 0.07
TOP3B-213ENST00000457179 SYNE3Q6ZMZ3 975 aa15.47■□□□□ 0.07
TOP3B-213ENST00000457179 ZNF804BA4D1E1 1349 aa15.47■□□□□ 0.07
TOP3B-213ENST00000457179 PLCH1Q4KWH8 1693 aa15.47■□□□□ 0.07
TOP3B-213ENST00000457179 ERICH2A1L162 156 aa15.47■□□□□ 0.07
TOP3B-213ENST00000457179 PSEN1P49768 467 aa15.47■□□□□ 0.07
TOP3B-213ENST00000457179 SF3B3Q15393 1217 aaKnown RBP15.47■□□□□ 0.07
TOP3B-213ENST00000457179 FUT8Q9BYC5 575 aa15.47■□□□□ 0.07
TOP3B-213ENST00000457179 NAT10Q9H0A0 1025 aaKnown RBP15.47■□□□□ 0.07
TOP3B-213ENST00000457179 PARP3Q9Y6F1 533 aa15.47■□□□□ 0.07
TOP3B-213ENST00000457179 SALL1Q9NSC2 1324 aa15.47■□□□□ 0.07
TOP3B-213ENST00000457179 NMT2O60551 498 aa15.47■□□□□ 0.07
TOP3B-213ENST00000457179 MAGEA9P43362 315 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms