RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 STK11IPQ8N1F8 1099 aa23.08■■□□□ 1.29
CSPG5-203ENST00000456150 KCNJ14Q9UNX9 436 aa23.08■■□□□ 1.29
CSPG5-203ENST00000456150 DUOX1Q9NRD9 1551 aa23.08■■□□□ 1.28
CSPG5-203ENST00000456150 PCP11498 1178 aaKnown RBP23.07■■□□□ 1.28
CSPG5-203ENST00000456150 TMC6Q7Z403 805 aa23.07■■□□□ 1.28
CSPG5-203ENST00000456150 METTL16Q86W50 562 aaKnown RBP23.07■■□□□ 1.28
CSPG5-203ENST00000456150 RIOK1Q9BRS2 568 aaKnown RBP23.07■■□□□ 1.28
CSPG5-203ENST00000456150 NOL10Q9BSC4 688 aaKnown RBP23.07■■□□□ 1.28
CSPG5-203ENST00000456150 RNF26Q9BY78 433 aaPredicted RBP23.07■■□□□ 1.28
CSPG5-203ENST00000456150 TNKSO95271 1327 aa23.07■■□□□ 1.28
CSPG5-203ENST00000456150 COL1A1P02452 1464 aaPredicted RBP23.07■■□□□ 1.28
CSPG5-203ENST00000456150 CBFA2T2O43439 604 aa23.07■■□□□ 1.28
CSPG5-203ENST00000456150 XBP1P17861 261 aa23.07■■□□□ 1.28
CSPG5-203ENST00000456150 PTPREP23469 700 aa23.07■■□□□ 1.28
CSPG5-203ENST00000456150 TOB1P50616 345 aaPredicted RBP23.07■■□□□ 1.28
CSPG5-203ENST00000456150 FANCCQ00597 558 aa23.07■■□□□ 1.28
CSPG5-203ENST00000456150 SYCP1Q15431 976 aa23.07■■□□□ 1.28
CSPG5-203ENST00000456150 PTPN14Q15678 1187 aa23.07■■□□□ 1.28
CSPG5-203ENST00000456150 LONRF3Q496Y0 759 aa23.07■■□□□ 1.28
CSPG5-203ENST00000456150 BRIP1Q9BX63 1249 aa23.07■■□□□ 1.28
CSPG5-203ENST00000456150 AKAP17AQ02040 695 aaKnown RBP23.06■■□□□ 1.28
CSPG5-203ENST00000456150 ISM2Q6H9L7 571 aa23.06■■□□□ 1.28
CSPG5-203ENST00000456150 NYAP1Q6ZVC0 841 aa23.06■■□□□ 1.28
CSPG5-203ENST00000456150 CCDC112Q8NEF3 446 aa23.06■■□□□ 1.28
CSPG5-203ENST00000456150 SRP68Q9UHB9 627 aaKnown RBP23.06■■□□□ 1.28
CSPG5-203ENST00000456150 MYH2Q9UKX2 1941 aa23.06■■□□□ 1.28
CSPG5-203ENST00000456150 LMOD1P29536 600 aaPredicted RBP23.05■■□□□ 1.28
CSPG5-203ENST00000456150 CCAR2Q8N163 923 aaKnown RBP23.05■■□□□ 1.28
CSPG5-203ENST00000456150 ZNF579Q8NAF0 562 aaKnown RBP23.05■■□□□ 1.28
CSPG5-203ENST00000456150 FBXO2Q9UK22 296 aaPredicted RBP23.05■■□□□ 1.28
CSPG5-203ENST00000456150 BAZ2AQ9UIF9 1905 aaKnown RBP23.05■■□□□ 1.28
CSPG5-203ENST00000456150 DLEC1Q9Y238 1755 aa23.05■■□□□ 1.28
CSPG5-203ENST00000456150 KIF2AO00139 706 aaPredicted RBP23.05■■□□□ 1.28
CSPG5-203ENST00000456150 SEMA3EO15041 775 aa23.05■■□□□ 1.28
CSPG5-203ENST00000456150 SFPQP23246 707 aaKnown RBP eCLIP23.05■■□□□ 1.28
CSPG5-203ENST00000456150 CCDC82Q8N4S0 544 aa23.05■■□□□ 1.28
CSPG5-203ENST00000456150 MINPP1Q9UNW1 487 aa23.05■■□□□ 1.28
CSPG5-203ENST00000456150 TAF1P21675 1872 aa23.05■■□□□ 1.28
CSPG5-203ENST00000456150 MYH13Q9UKX3 1938 aa23.05■■□□□ 1.28
CSPG5-203ENST00000456150 USP27XA6NNY8 438 aa23.04■■□□□ 1.28
CSPG5-203ENST00000456150 KCNJ6P48051 423 aa23.04■■□□□ 1.28
CSPG5-203ENST00000456150 ZSCAN10Q96SZ4 725 aaPredicted RBP23.04■■□□□ 1.28
CSPG5-203ENST00000456150 RTCBQ9Y3I0 505 aaKnown RBP23.04■■□□□ 1.28
CSPG5-203ENST00000456150 C3orf67Q6ZVT6 689 aa23.04■■□□□ 1.28
CSPG5-203ENST00000456150 ANKRD7Q92527 254 aa23.04■■□□□ 1.28
CSPG5-203ENST00000456150 CCDC94Q9BW85 323 aaPredicted RBP23.04■■□□□ 1.28
CSPG5-203ENST00000456150 RBM28Q9NW13 759 aaKnown RBP23.04■■□□□ 1.28
CSPG5-203ENST00000456150 PCDHA5Q9Y5H7 936 aa23.04■■□□□ 1.28
CSPG5-203ENST00000456150 CATIPQ7Z7H3 387 aa23.03■■□□□ 1.28
CSPG5-203ENST00000456150 IQCA1Q86XH1 822 aa23.03■■□□□ 1.28
CSPG5-203ENST00000456150 CMTR1Q8N1G2 835 aaKnown RBP23.03■■□□□ 1.28
CSPG5-203ENST00000456150 ARHGEF1Q92888 912 aaKnown RBP23.03■■□□□ 1.28
CSPG5-203ENST00000456150 HSD3B7Q9H2F3 369 aa23.03■■□□□ 1.28
CSPG5-203ENST00000456150 MORC2Q9Y6X9 1032 aaPredicted RBP23.03■■□□□ 1.28
CSPG5-203ENST00000456150 CALM1P0DP23 149 aa23.02■■□□□ 1.28
CSPG5-203ENST00000456150 CALM2P0DP24 149 aa23.02■■□□□ 1.28
CSPG5-203ENST00000456150 CALM3P0DP25 149 aa23.02■■□□□ 1.28
CSPG5-203ENST00000456150 GTF2E1P29083 439 aaPredicted RBP23.02■■□□□ 1.28
CSPG5-203ENST00000456150 NR5A1Q13285 461 aa23.02■■□□□ 1.28
CSPG5-203ENST00000456150 SLC10A5Q5PT55 438 aa23.02■■□□□ 1.28
CSPG5-203ENST00000456150 IFIT1BQ5T764 474 aaKnown RBP23.02■■□□□ 1.28
CSPG5-203ENST00000456150 PROM2Q8N271 834 aa23.02■■□□□ 1.28
CSPG5-203ENST00000456150 ENAHQ8N8S7 591 aaPredicted RBP23.02■■□□□ 1.28
CSPG5-203ENST00000456150 FAM84BQ96KN1 310 aaPredicted RBP23.02■■□□□ 1.28
CSPG5-203ENST00000456150 SRPRBQ9Y5M8 271 aaKnown RBP23.02■■□□□ 1.28
CSPG5-203ENST00000456150 PDS5AQ29RF7 1337 aaKnown RBP23.02■■□□□ 1.28
CSPG5-203ENST00000456150 MDM2Q00987 491 aaPredicted RBP23.02■■□□□ 1.28
CSPG5-203ENST00000456150 KANK3Q6NY19 840 aa23.02■■□□□ 1.28
CSPG5-203ENST00000456150 ARMCX5Q6P1M9 558 aa23.02■■□□□ 1.28
CSPG5-203ENST00000456150 SERPINC1P01008 464 aa23.01■■□□□ 1.27
CSPG5-203ENST00000456150 FGRP09769 529 aa23.01■■□□□ 1.27
CSPG5-203ENST00000456150 UBASH3AP57075 661 aa23.01■■□□□ 1.27
CSPG5-203ENST00000456150 POSTNQ15063 836 aa23.01■■□□□ 1.27
CSPG5-203ENST00000456150 BICDL1Q6ZP65 573 aa23.01■■□□□ 1.27
CSPG5-203ENST00000456150 ZNF592Q92610 1267 aa23.01■■□□□ 1.27
CSPG5-203ENST00000456150 NYXQ9GZU5 481 aa23.01■■□□□ 1.27
CSPG5-203ENST00000456150 NARFQ9UHQ1 456 aa23.01■■□□□ 1.27
CSPG5-203ENST00000456150 DACH1Q9UI36 760 aa23.01■■□□□ 1.27
CSPG5-203ENST00000456150 PCDHB6Q9Y5E3 794 aa23.01■■□□□ 1.27
CSPG5-203ENST00000456150 PRPF3O43395 683 aaKnown RBP23.01■■□□□ 1.27
CSPG5-203ENST00000456150 ATP1A3P13637 1013 aa23.01■■□□□ 1.27
CSPG5-203ENST00000456150 DYNLL1P63167 89 aaKnown RBP23.01■■□□□ 1.27
CSPG5-203ENST00000456150 TBC1D9BQ66K14 1250 aa23.01■■□□□ 1.27
CSPG5-203ENST00000456150 FBXO33Q7Z6M2 555 aa23.01■■□□□ 1.27
CSPG5-203ENST00000456150 PSDA5PKW4 1024 aaPredicted RBP23■■□□□ 1.27
CSPG5-203ENST00000456150 SPECC1Q5M775 1068 aa23■■□□□ 1.27
CSPG5-203ENST00000456150 FOXP4Q8IVH2 680 aaPredicted RBP23■■□□□ 1.27
CSPG5-203ENST00000456150 PDCL2Q8N4E4 241 aa23■■□□□ 1.27
CSPG5-203ENST00000456150 TRMT1Q9NXH9 659 aaKnown RBP23■■□□□ 1.27
CSPG5-203ENST00000456150 LAMB1P07942 1786 aa23■■□□□ 1.27
CSPG5-203ENST00000456150 POLR2DO15514 142 aaKnown RBP22.99■■□□□ 1.27
CSPG5-203ENST00000456150 DDAH1O94760 285 aa22.99■■□□□ 1.27
CSPG5-203ENST00000456150 KRT2P35908 639 aa22.99■■□□□ 1.27
CSPG5-203ENST00000456150 NT5DC1Q5TFE4 455 aa22.99■■□□□ 1.27
CSPG5-203ENST00000456150 TRIML1Q8N9V2 468 aa22.99■■□□□ 1.27
CSPG5-203ENST00000456150 OXER1Q8TDS5 423 aa22.99■■□□□ 1.27
CSPG5-203ENST00000456150 CELF1Q92879 486 aaKnown RBP22.99■■□□□ 1.27
CSPG5-203ENST00000456150 CABP5Q9NP86 173 aa22.99■■□□□ 1.27
CSPG5-203ENST00000456150 TXNRD1Q16881 649 aa22.99■■□□□ 1.27
CSPG5-203ENST00000456150 SLC27A3Q5K4L6 730 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms