RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 VEZTQ9HBM0 779 aa5.91□□□□□ -1.46
GTF3C3-208ENST00000455546 RIPOR2Q9Y4F9 1068 aa5.91□□□□□ -1.46
GTF3C3-208ENST00000455546 ZNF609O15014 1411 aa5.91□□□□□ -1.46
GTF3C3-208ENST00000455546 USP2O75604 605 aaPredicted RBP5.9□□□□□ -1.46
GTF3C3-208ENST00000455546 HIBADHP31937 336 aaKnown RBP5.9□□□□□ -1.46
GTF3C3-208ENST00000455546 RGS19P49795 217 aa5.9□□□□□ -1.46
GTF3C3-208ENST00000455546 SOX10P56693 466 aa5.9□□□□□ -1.46
GTF3C3-208ENST00000455546 SH3BP2P78314 561 aa5.9□□□□□ -1.46
GTF3C3-208ENST00000455546 MFSD14BQ5SR56 506 aa5.9□□□□□ -1.46
GTF3C3-208ENST00000455546 LDLRAD1Q5T700 205 aa5.9□□□□□ -1.46
GTF3C3-208ENST00000455546 APOBEC3FQ8IUX4 373 aaKnown RBP5.9□□□□□ -1.46
GTF3C3-208ENST00000455546 ZNF296Q8WUU4 475 aaPredicted RBP5.9□□□□□ -1.46
GTF3C3-208ENST00000455546 SSH1Q8WYL5 1049 aa5.9□□□□□ -1.46
GTF3C3-208ENST00000455546 SLC10A4Q96EP9 437 aa5.9□□□□□ -1.46
GTF3C3-208ENST00000455546 USP44Q9H0E7 712 aa5.9□□□□□ -1.46
GTF3C3-208ENST00000455546 TDRD3Q9H7E2 651 aaKnown RBP5.9□□□□□ -1.46
GTF3C3-208ENST00000455546 SAGE1Q9NXZ1 904 aa5.9□□□□□ -1.46
GTF3C3-208ENST00000455546 TTF2Q9UNY4 1162 aaKnown RBP5.9□□□□□ -1.46
GTF3C3-208ENST00000455546 MAFBQ9Y5Q3 323 aaPredicted RBP5.9□□□□□ -1.46
GTF3C3-208ENST00000455546 ZNF521Q96K83 1311 aa5.9□□□□□ -1.47
GTF3C3-208ENST00000455546 CARNS1A5YM72 827 aa5.89□□□□□ -1.47
GTF3C3-208ENST00000455546 TCP10L2B9ZVM9 353 aa5.89□□□□□ -1.47
GTF3C3-208ENST00000455546 GPR25O00155 361 aa5.89□□□□□ -1.47
GTF3C3-208ENST00000455546 ZBTB24O43167 697 aaPredicted RBP5.89□□□□□ -1.47
GTF3C3-208ENST00000455546 MYO1BO43795 1136 aa5.89□□□□□ -1.47
GTF3C3-208ENST00000455546 ATP9BO43861 1147 aa5.89□□□□□ -1.47
GTF3C3-208ENST00000455546 RAB15P59190 212 aa5.89□□□□□ -1.47
GTF3C3-208ENST00000455546 SLFN5Q08AF3 891 aa5.89□□□□□ -1.47
GTF3C3-208ENST00000455546 CHAF1AQ13111 956 aaPredicted RBP5.89□□□□□ -1.47
GTF3C3-208ENST00000455546 MMRN1Q13201 1228 aa5.89□□□□□ -1.47
GTF3C3-208ENST00000455546 UBE4AQ14139 1066 aa5.89□□□□□ -1.47
GTF3C3-208ENST00000455546 RASA3Q14644 834 aa5.89□□□□□ -1.47
GTF3C3-208ENST00000455546 METTL24Q5JXM2 366 aa5.89□□□□□ -1.47
GTF3C3-208ENST00000455546 SPRYD7Q5W111 196 aa5.89□□□□□ -1.47
GTF3C3-208ENST00000455546 FBXO33Q7Z6M2 555 aa5.89□□□□□ -1.47
GTF3C3-208ENST00000455546 CTU1Q7Z7A3 348 aaKnown RBP5.89□□□□□ -1.47
GTF3C3-208ENST00000455546 VPS37DQ86XT2 251 aa5.89□□□□□ -1.47
GTF3C3-208ENST00000455546 ANKRD44Q8N8A2 993 aa5.89□□□□□ -1.47
GTF3C3-208ENST00000455546 PBXIP1Q96AQ6 731 aa5.89□□□□□ -1.47
GTF3C3-208ENST00000455546 ZNF70Q9UC06 446 aaPredicted RBP5.89□□□□□ -1.47
GTF3C3-208ENST00000455546 GPSM3Q9Y4H4 160 aa5.89□□□□□ -1.47
GTF3C3-208ENST00000455546 UTYO14607 1347 aa5.89□□□□□ -1.47
GTF3C3-208ENST00000455546 USP17L5A8MUK1 530 aa5.88□□□□□ -1.47
GTF3C3-208ENST00000455546 PPP1R12BO60237 982 aaPredicted RBP5.88□□□□□ -1.47
GTF3C3-208ENST00000455546 FRAT2O75474 233 aaPredicted RBP5.88□□□□□ -1.47
GTF3C3-208ENST00000455546 GGCXP38435 758 aa5.88□□□□□ -1.47
GTF3C3-208ENST00000455546 CRKP46108 304 aa5.88□□□□□ -1.47
GTF3C3-208ENST00000455546 MMP14P50281 582 aa5.88□□□□□ -1.47
GTF3C3-208ENST00000455546 CACNB3P54284 484 aa5.88□□□□□ -1.47
GTF3C3-208ENST00000455546 FKBP1AP62942 108 aaKnown RBP5.88□□□□□ -1.47
GTF3C3-208ENST00000455546 SKOR1P84550 965 aa5.88□□□□□ -1.47
GTF3C3-208ENST00000455546 TRIM32Q13049 653 aa5.88□□□□□ -1.47
GTF3C3-208ENST00000455546 RABL6Q3YEC7 729 aaPredicted RBP5.88□□□□□ -1.47
GTF3C3-208ENST00000455546 SUPT20HL1Q3ZLR7 823 aa5.88□□□□□ -1.47
GTF3C3-208ENST00000455546 SLFNL1Q499Z3 407 aa5.88□□□□□ -1.47
GTF3C3-208ENST00000455546 SH3RF1Q7Z6J0 888 aa5.88□□□□□ -1.47
GTF3C3-208ENST00000455546 BPHLQ86WA6 291 aaPredicted RBP5.88□□□□□ -1.47
GTF3C3-208ENST00000455546 RNF135Q8IUD6 432 aa5.88□□□□□ -1.47
GTF3C3-208ENST00000455546 DZIP1LQ8IYY4 767 aaKnown RBP5.88□□□□□ -1.47
GTF3C3-208ENST00000455546 ANKLE1Q8NAG6 615 aa5.88□□□□□ -1.47
GTF3C3-208ENST00000455546 WNK4Q96J92 1243 aa5.88□□□□□ -1.47
GTF3C3-208ENST00000455546 TMEM39BQ9GZU3 492 aa5.88□□□□□ -1.47
GTF3C3-208ENST00000455546 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.88□□□□□ -1.47
GTF3C3-208ENST00000455546 CEP126Q9P2H0 1117 aa5.88□□□□□ -1.47
GTF3C3-208ENST00000455546 FAM205AQ6ZU69 1335 aa5.88□□□□□ -1.47
GTF3C3-208ENST00000455546 MROH5Q6ZUA9 1318 aa5.88□□□□□ -1.47
GTF3C3-208ENST00000455546 KIAA0100Q14667 2235 aaKnown RBP5.88□□□□□ -1.47
GTF3C3-208ENST00000455546 PDE4DIPQ5VU43 2346 aa5.88□□□□□ -1.47
GTF3C3-208ENST00000455546 MYH13Q9UKX3 1938 aa5.87□□□□□ -1.47
GTF3C3-208ENST00000455546 E9PSI1 815 aa5.87□□□□□ -1.47
GTF3C3-208ENST00000455546 IGF2BP3O00425 579 aaKnown RBP eCLIP5.87□□□□□ -1.47
GTF3C3-208ENST00000455546 FKTNO75072 461 aa5.87□□□□□ -1.47
GTF3C3-208ENST00000455546 PDE8BO95263 885 aa5.87□□□□□ -1.47
GTF3C3-208ENST00000455546 PDIA4P13667 645 aaKnown RBP5.87□□□□□ -1.47
GTF3C3-208ENST00000455546 IREB2P48200 963 aaKnown RBP5.87□□□□□ -1.47
GTF3C3-208ENST00000455546 RFX5P48382 616 aaPredicted RBP5.87□□□□□ -1.47
GTF3C3-208ENST00000455546 SREBF2Q12772 1141 aa5.87□□□□□ -1.47
GTF3C3-208ENST00000455546 MAP3K11Q16584 847 aa5.87□□□□□ -1.47
GTF3C3-208ENST00000455546 TSGA10IPQ3SY00 556 aa5.87□□□□□ -1.47
GTF3C3-208ENST00000455546 CAVIN4Q5BKX8 364 aa5.87□□□□□ -1.47
GTF3C3-208ENST00000455546 USP17L2Q6R6M4 530 aa5.87□□□□□ -1.47
GTF3C3-208ENST00000455546 VGLL2Q8N8G2 317 aa5.87□□□□□ -1.47
GTF3C3-208ENST00000455546 PTPN18Q99952 460 aa5.87□□□□□ -1.47
GTF3C3-208ENST00000455546 SIL1Q9H173 461 aa5.87□□□□□ -1.47
GTF3C3-208ENST00000455546 ELP3Q9H9T3 547 aa5.87□□□□□ -1.47
GTF3C3-208ENST00000455546 PCDH10Q9P2E7 1040 aa5.87□□□□□ -1.47
GTF3C3-208ENST00000455546 NOB1Q9ULX3 412 aaKnown RBP5.87□□□□□ -1.47
GTF3C3-208ENST00000455546 PTPRCP08575 1304 aa5.87□□□□□ -1.47
GTF3C3-208ENST00000455546 SSC5DA1L4H1 1573 aa5.87□□□□□ -1.47
GTF3C3-208ENST00000455546 OTOFQ9HC10 1997 aa5.86□□□□□ -1.47
GTF3C3-208ENST00000455546 MANSC4A6NHS7 340 aaPredicted RBP5.86□□□□□ -1.47
GTF3C3-208ENST00000455546 EYA2O00167 538 aa5.86□□□□□ -1.47
GTF3C3-208ENST00000455546 FGFR2P21802 821 aa5.86□□□□□ -1.47
GTF3C3-208ENST00000455546 CAP1Q01518 475 aa5.86□□□□□ -1.47
GTF3C3-208ENST00000455546 NCOA4Q13772 614 aa5.86□□□□□ -1.47
GTF3C3-208ENST00000455546 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.86□□□□□ -1.47
GTF3C3-208ENST00000455546 MIGA2Q7L4E1 593 aa5.86□□□□□ -1.47
GTF3C3-208ENST00000455546 ATG9AQ7Z3C6 839 aa5.86□□□□□ -1.47
GTF3C3-208ENST00000455546 ANKRD13AQ8IZ07 590 aa5.86□□□□□ -1.47
GTF3C3-208ENST00000455546 TRMT2AQ8IZ69 625 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms