RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 AS3MTQ9HBK9 375 aa22.54■■□□□ 1.2
UBE2D4-208ENST00000454350 GINM1Q9NU53 330 aa22.54■■□□□ 1.2
UBE2D4-208ENST00000454350 PNMA3Q9UL41 463 aa22.54■■□□□ 1.2
UBE2D4-208ENST00000454350 BAZ2AQ9UIF9 1905 aaKnown RBP22.53■■□□□ 1.2
UBE2D4-208ENST00000454350 APBB1O00213 710 aa22.53■■□□□ 1.2
UBE2D4-208ENST00000454350 TATDN1Q6P1N9 297 aa22.53■■□□□ 1.2
UBE2D4-208ENST00000454350 CERS3Q8IU89 383 aa22.53■■□□□ 1.2
UBE2D4-208ENST00000454350 CLASRPQ8N2M8 674 aaKnown RBP22.53■■□□□ 1.2
UBE2D4-208ENST00000454350 CRACR2BQ8N4Y2 399 aaPredicted RBP22.53■■□□□ 1.2
UBE2D4-208ENST00000454350 MYH8P13535 1937 aa22.53■■□□□ 1.2
UBE2D4-208ENST00000454350 TCRBV5S4A2TA0A5A2 114 aa22.52■■□□□ 1.2
UBE2D4-208ENST00000454350 TNPO2O14787 897 aaKnown RBP22.52■■□□□ 1.2
UBE2D4-208ENST00000454350 HMMRO75330 724 aa22.52■■□□□ 1.2
UBE2D4-208ENST00000454350 CCL5P13501 91 aa22.52■■□□□ 1.2
UBE2D4-208ENST00000454350 HOXA7P31268 230 aaPredicted RBP22.52■■□□□ 1.2
UBE2D4-208ENST00000454350 GCLCP48506 637 aaPredicted RBP22.52■■□□□ 1.2
UBE2D4-208ENST00000454350 IRF5Q13568 498 aa22.52■■□□□ 1.2
UBE2D4-208ENST00000454350 SLAIN1Q8ND83 568 aa22.52■■□□□ 1.2
UBE2D4-208ENST00000454350 EHD4Q9H223 541 aa22.52■■□□□ 1.2
UBE2D4-208ENST00000454350 RAB11FIP3O75154 756 aa22.51■■□□□ 1.19
UBE2D4-208ENST00000454350 HLA-DOAP06340 250 aa22.51■■□□□ 1.19
UBE2D4-208ENST00000454350 PDE6AP16499 860 aa22.51■■□□□ 1.19
UBE2D4-208ENST00000454350 USP5P45974 858 aa22.51■■□□□ 1.19
UBE2D4-208ENST00000454350 UBE2Q1Q7Z7E8 422 aa22.51■■□□□ 1.19
UBE2D4-208ENST00000454350 EDC3Q96F86 508 aaKnown RBP22.51■■□□□ 1.19
UBE2D4-208ENST00000454350 C19orf81C9J6K1 198 aa22.5■■□□□ 1.19
UBE2D4-208ENST00000454350 ADCY3O60266 1144 aa22.5■■□□□ 1.19
UBE2D4-208ENST00000454350 GJB1P08034 283 aa22.5■■□□□ 1.19
UBE2D4-208ENST00000454350 ELNP15502 786 aa22.5■■□□□ 1.19
UBE2D4-208ENST00000454350 GJA8P48165 433 aa22.5■■□□□ 1.19
UBE2D4-208ENST00000454350 PLCD1P51178 756 aa22.5■■□□□ 1.19
UBE2D4-208ENST00000454350 PABPC4Q13310 644 aaKnown RBP eCLIP22.5■■□□□ 1.19
UBE2D4-208ENST00000454350 TTF1Q15361 905 aaPredicted RBP22.5■■□□□ 1.19
UBE2D4-208ENST00000454350 POTEEQ6S8J3 1075 aa22.5■■□□□ 1.19
UBE2D4-208ENST00000454350 PXYLP1Q8TE99 480 aa22.5■■□□□ 1.19
UBE2D4-208ENST00000454350 MORF4L1Q9UBU8 362 aa22.5■■□□□ 1.19
UBE2D4-208ENST00000454350 SERPINB13Q9UIV8 391 aa22.5■■□□□ 1.19
UBE2D4-208ENST00000454350 USP17L10C9JJH3 530 aa22.49■■□□□ 1.19
UBE2D4-208ENST00000454350 GOLIM4O00461 696 aa22.49■■□□□ 1.19
UBE2D4-208ENST00000454350 GH2P01242 217 aa22.49■■□□□ 1.19
UBE2D4-208ENST00000454350 EVX2Q03828 476 aa22.49■■□□□ 1.19
UBE2D4-208ENST00000454350 PDE3AQ14432 1141 aa22.49■■□□□ 1.19
UBE2D4-208ENST00000454350 SLC9C2Q5TAH2 1124 aa22.49■■□□□ 1.19
UBE2D4-208ENST00000454350 P2RX7Q99572 595 aaKnown RBP22.49■■□□□ 1.19
UBE2D4-208ENST00000454350 UNC93B1Q9H1C4 597 aa22.49■■□□□ 1.19
UBE2D4-208ENST00000454350 EMILIN3Q9NT22 766 aa22.49■■□□□ 1.19
UBE2D4-208ENST00000454350 GJD2Q9UKL4 321 aa22.49■■□□□ 1.19
UBE2D4-208ENST00000454350 MAGEB6P1A0A0J9YX57 407 aa22.48■■□□□ 1.19
UBE2D4-208ENST00000454350 PEX10O60683 326 aa22.48■■□□□ 1.19
UBE2D4-208ENST00000454350 IFIT2P09913 472 aaKnown RBP22.48■■□□□ 1.19
UBE2D4-208ENST00000454350 SHMT1P34896 483 aa22.48■■□□□ 1.19
UBE2D4-208ENST00000454350 GABPAQ06546 454 aa22.48■■□□□ 1.19
UBE2D4-208ENST00000454350 TRIM34Q9BYJ4 488 aa22.48■■□□□ 1.19
UBE2D4-208ENST00000454350 TXNRD2Q9NNW7 524 aa22.48■■□□□ 1.19
UBE2D4-208ENST00000454350 ZNF532Q9HCE3 1301 aa22.48■■□□□ 1.19
UBE2D4-208ENST00000454350 INHAP05111 366 aa22.47■■□□□ 1.19
UBE2D4-208ENST00000454350 UBXN2AP68543 259 aa22.47■■□□□ 1.19
UBE2D4-208ENST00000454350 SLFNL1Q499Z3 407 aa22.47■■□□□ 1.19
UBE2D4-208ENST00000454350 DNAJC2Q99543 621 aaKnown RBP22.47■■□□□ 1.19
UBE2D4-208ENST00000454350 RNF208Q9H0X6 261 aa22.47■■□□□ 1.19
UBE2D4-208ENST00000454350 TMOD4Q9NZQ9 345 aa22.47■■□□□ 1.19
UBE2D4-208ENST00000454350 RLFQ13129 1914 aa22.47■■□□□ 1.19
UBE2D4-208ENST00000454350 ATP5JP18859 108 aa22.46■■□□□ 1.19
UBE2D4-208ENST00000454350 TTC6Q86TZ1 520 aa22.46■■□□□ 1.19
UBE2D4-208ENST00000454350 COA7Q96BR5 231 aa22.46■■□□□ 1.19
UBE2D4-208ENST00000454350 CHMP4BQ9H444 224 aaKnown RBP22.46■■□□□ 1.19
UBE2D4-208ENST00000454350 BIN2Q9UBW5 565 aaPredicted RBP22.46■■□□□ 1.19
UBE2D4-208ENST00000454350 ALPK3Q96L96 1907 aa22.46■■□□□ 1.19
UBE2D4-208ENST00000454350 GUCY1A2P33402 732 aa22.45■■□□□ 1.18
UBE2D4-208ENST00000454350 HERVK_113P62684 666 aa22.45■■□□□ 1.18
UBE2D4-208ENST00000454350 IRX3P78415 501 aaPredicted RBP22.45■■□□□ 1.18
UBE2D4-208ENST00000454350 LCORLQ8N3X6 602 aa22.45■■□□□ 1.18
UBE2D4-208ENST00000454350 NKX2-3Q8TAU0 364 aa22.45■■□□□ 1.18
UBE2D4-208ENST00000454350 C12orf42Q96LP6 360 aa22.45■■□□□ 1.18
UBE2D4-208ENST00000454350 BOLA2Q9H3K6 86 aa22.45■■□□□ 1.18
UBE2D4-208ENST00000454350 RBPJLQ9UBG7 517 aa22.45■■□□□ 1.18
UBE2D4-208ENST00000454350 CHGBP05060 677 aa22.44■■□□□ 1.18
UBE2D4-208ENST00000454350 CERKLQ49MI3 558 aaPredicted RBP22.44■■□□□ 1.18
UBE2D4-208ENST00000454350 USP17L2Q6R6M4 530 aa22.44■■□□□ 1.18
UBE2D4-208ENST00000454350 U2AF1L4Q8WU68 220 aaKnown RBP22.44■■□□□ 1.18
UBE2D4-208ENST00000454350 SDR42E1Q8WUS8 393 aa22.44■■□□□ 1.18
UBE2D4-208ENST00000454350 HAUS7Q99871 368 aa22.44■■□□□ 1.18
UBE2D4-208ENST00000454350 CRNKL1Q9BZJ0 848 aaKnown RBP22.44■■□□□ 1.18
UBE2D4-208ENST00000454350 DCP1AQ9NPI6 582 aaPredicted RBP22.44■■□□□ 1.18
UBE2D4-208ENST00000454350 PAK6Q9NQU5 681 aaPredicted RBP22.44■■□□□ 1.18
UBE2D4-208ENST00000454350 PAG1Q9NWQ8 432 aa22.44■■□□□ 1.18
UBE2D4-208ENST00000454350 SGPL1O95470 568 aa22.43■■□□□ 1.18
UBE2D4-208ENST00000454350 ADD2P35612 726 aa22.43■■□□□ 1.18
UBE2D4-208ENST00000454350 Q3C1V9 767 aa22.43■■□□□ 1.18
UBE2D4-208ENST00000454350 ACER1Q8TDN7 264 aa22.43■■□□□ 1.18
UBE2D4-208ENST00000454350 BCL11AQ9H165 835 aa22.43■■□□□ 1.18
UBE2D4-208ENST00000454350 TRIOBPQ9H2D6 2365 aa22.43■■□□□ 1.18
UBE2D4-208ENST00000454350 SMARCA5O60264 1052 aaPredicted RBP22.42■■□□□ 1.18
UBE2D4-208ENST00000454350 ABCB5Q2M3G0 1257 aa22.42■■□□□ 1.18
UBE2D4-208ENST00000454350 KIAA1683Q9H0B3 1180 aa22.42■■□□□ 1.18
UBE2D4-208ENST00000454350 PARP14Q460N5 1801 aa22.42■■□□□ 1.18
UBE2D4-208ENST00000454350 CYP2D6P10635 497 aa22.41■■□□□ 1.18
UBE2D4-208ENST00000454350 GCC1Q96CN9 775 aa22.41■■□□□ 1.18
UBE2D4-208ENST00000454350 LRRCC1Q9C099 1032 aa22.41■■□□□ 1.18
UBE2D4-208ENST00000454350 CRISPLD2Q9H0B8 497 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms