RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 A1CFQ9NQ94 594 aaKnown RBP4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 LRRC4BQ9NT99 713 aa4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 DZANK1Q9NVP4 752 aa4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 SNTG2Q9NY99 539 aa4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 TLR7Q9NYK1 1049 aaKnown RBP4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 RCAN3Q9UKA8 241 aa4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 SUFUQ9UMX1 484 aa4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 PTPN23Q9H3S7 1636 aa4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 EPRSP07814 1512 aaKnown RBP4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 TOP2AP11388 1531 aaKnown RBP4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 GAPVD1Q14C86 1478 aa4.3□□□□□ -1.72
HMGB3P8-201ENST00000449709 BCORL1Q5H9F3 1711 aa4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 KIF21AQ7Z4S6 1674 aa4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 LAMC1P11047 1609 aa4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 SPAG9O60271 1321 aaKnown RBP4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 MAPK8IP3Q9UPT6 1336 aa4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 SAMD9Q5K651 1589 aa4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 FAM221BA6H8Z2 402 aa4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 NFKBIEO00221 500 aa4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 C2CD2LO14523 706 aa4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 ENC1O14682 589 aa4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 ATXN7O15265 892 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 BNIP3LO60238 219 aa4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 PROCP04070 461 aa4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 PSAPP07602 524 aa4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 TFE3P19532 575 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 CHMLP26374 656 aa4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 CTBSQ01459 385 aa4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 NCBP1Q09161 790 aaKnown RBP4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 APOBRQ0VD83 1088 aa4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 HDAC1Q13547 482 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 LAMC2Q13753 1193 aa4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 GRIN2CQ14957 1233 aa4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 CDC37Q16543 378 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 SPRED3Q2MJR0 410 aa4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 PLEKHG4Q58EX7 1191 aa4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 TTBK2Q6IQ55 1244 aa4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 RINLQ6ZS11 566 aa4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 FAM196AQ6ZSG2 479 aa4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 NCAPG2Q86XI2 1143 aa4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 KRT222Q8N1A0 295 aa4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 CPLX3Q8WVH0 158 aa4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 STAG1Q8WVM7 1258 aa4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 KCNB2Q92953 911 aa4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 TNPO1Q92973 898 aaKnown RBP4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 DEPDC7Q96QD5 511 aa4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 SRRTQ9BXP5 876 aaKnown RBP4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 LRRC3Q9BY71 257 aa4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 TRIM55Q9BYV6 548 aa4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 UBXN6Q9BZV1 441 aa4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 BHLHE41Q9C0J9 482 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 SEC31BQ9NQW1 1179 aa4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 PHF24Q9UPV7 400 aa4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 MSRB2Q9Y3D2 182 aa4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 JRKLQ9Y4A0 524 aa4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 FYCO1Q9BQS8 1478 aa4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 WIZO95785 1651 aa4.29□□□□□ -1.72
HMGB3P8-201ENST00000449709 ROBO2Q9HCK4 1378 aa4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 CGNL1Q0VF96 1302 aa4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 ZNF608Q9ULD9 1512 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 A0A096LPE4 126 aa4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 A0A1W2PPZ6 126 aa4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 KRBA1A5PL33 1030 aa4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 METTL12A8MUP2 240 aa4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 MYO1CO00159 1063 aa4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 U2SURPO15042 1029 aaKnown RBP4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 IPO8O15397 1037 aaKnown RBP4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 SGSM2O43147 1006 aa4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 PAGE1O75459 146 aa4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 RPS6KA5O75582 802 aa4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 TRPA1O75762 1119 aa4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 IPO7O95373 1038 aaKnown RBP4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 MAP3K6O95382 1288 aa4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 FAM163BP0C2L3 166 aa4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 BMP4P12644 408 aa4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 NFKB1P19838 968 aa4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 IRX1P78414 480 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 TNP2Q05952 138 aa4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 FAAP100Q0VG06 881 aa4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 HYAL2Q12891 473 aa4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 MYBPC2Q14324 1141 aa4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 NOLC1Q14978 699 aaKnown RBP eCLIP4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 RGL3Q3MIN7 710 aa4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 DNAJC21Q5F1R6 531 aaKnown RBP4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 RPS26P11Q5JNZ5 115 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 LRCH2Q5VUJ6 765 aa4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 MCTP2Q6DN12 878 aa4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 FIGNL1Q6PIW4 674 aa4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 TRIM42Q8IWZ5 723 aa4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 TMEM102Q8N9M5 508 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 EDARADDQ8WWZ3 215 aa4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 ERCC4Q92889 916 aaPredicted RBP4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 NXPE3Q969Y0 559 aa4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 ANAPC16Q96DE5 110 aa4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 FAXDC2Q96IV6 333 aa4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 MMTAG2Q9BU76 263 aaKnown RBP4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 UPF2Q9HAU5 1272 aaKnown RBP4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 RRAGCQ9HB90 399 aa4.28□□□□□ -1.72
HMGB3P8-201ENST00000449709 STRN4Q9NRL3 753 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms