RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 ATP2B2Q01814 1243 aa15.79■□□□□ 0.12
AC004540.1-204ENST00000449537 SNX17Q15036 470 aa15.79■□□□□ 0.12
AC004540.1-204ENST00000449537 AS3MTQ9HBK9 375 aa15.79■□□□□ 0.12
AC004540.1-204ENST00000449537 TMOD4Q9NZQ9 345 aa15.79■□□□□ 0.12
AC004540.1-204ENST00000449537 FLRT1Q9NZU1 646 aa15.79■□□□□ 0.12
AC004540.1-204ENST00000449537 FRMPD3Q5JV73 1810 aa15.79■□□□□ 0.12
AC004540.1-204ENST00000449537 RLFQ13129 1914 aa15.78■□□□□ 0.12
AC004540.1-204ENST00000449537 LOC285556D6RIA3 1793 aa15.78■□□□□ 0.12
AC004540.1-204ENST00000449537 IGFBP4P22692 258 aa15.78■□□□□ 0.12
AC004540.1-204ENST00000449537 ITGB8P26012 769 aa15.78■□□□□ 0.12
AC004540.1-204ENST00000449537 CAP2P40123 477 aa15.78■□□□□ 0.12
AC004540.1-204ENST00000449537 TLE2Q04725 743 aa15.78■□□□□ 0.12
AC004540.1-204ENST00000449537 PICALMQ13492 652 aa15.78■□□□□ 0.12
AC004540.1-204ENST00000449537 PUM3Q15397 648 aaKnown RBP15.78■□□□□ 0.12
AC004540.1-204ENST00000449537 MYBBP1AQ9BQG0 1328 aaKnown RBP15.77■□□□□ 0.12
AC004540.1-204ENST00000449537 MYCNP04198 464 aaPredicted RBP15.77■□□□□ 0.12
AC004540.1-204ENST00000449537 RAG1P15918 1043 aa15.77■□□□□ 0.12
AC004540.1-204ENST00000449537 FGFR2P21802 821 aa15.77■□□□□ 0.12
AC004540.1-204ENST00000449537 FPGSQ05932 587 aa15.77■□□□□ 0.12
AC004540.1-204ENST00000449537 C1orf53Q5VUE5 145 aa15.77■□□□□ 0.12
AC004540.1-204ENST00000449537 GTF3C2Q8WUA4 911 aaPredicted RBP15.77■□□□□ 0.12
AC004540.1-204ENST00000449537 PAGR1Q9BTK6 254 aa15.77■□□□□ 0.12
AC004540.1-204ENST00000449537 DDX4Q9NQI0 724 aaKnown RBP15.77■□□□□ 0.12
AC004540.1-204ENST00000449537 CXXC1Q9P0U4 656 aaPredicted RBP15.77■□□□□ 0.12
AC004540.1-204ENST00000449537 MUC6Q6W4X9 2439 aa15.76■□□□□ 0.11
AC004540.1-204ENST00000449537 FAM196BA6NMK8 535 aa15.76■□□□□ 0.11
AC004540.1-204ENST00000449537 CYP2C19P33261 490 aa15.76■□□□□ 0.11
AC004540.1-204ENST00000449537 ADCYAP1R1P41586 468 aa15.76■□□□□ 0.11
AC004540.1-204ENST00000449537 BACE1P56817 501 aa15.76■□□□□ 0.11
AC004540.1-204ENST00000449537 ADGRE1Q14246 886 aa15.76■□□□□ 0.11
AC004540.1-204ENST00000449537 AAK1Q2M2I8 961 aa15.76■□□□□ 0.11
AC004540.1-204ENST00000449537 CCDC129Q6ZRS4 1044 aa15.76■□□□□ 0.11
AC004540.1-204ENST00000449537 FERMT2Q96AC1 680 aa15.76■□□□□ 0.11
AC004540.1-204ENST00000449537 SUCLG2Q96I99 432 aa15.76■□□□□ 0.11
AC004540.1-204ENST00000449537 SLC15A5A6NIM6 579 aa15.75■□□□□ 0.11
AC004540.1-204ENST00000449537 C19orf81C9J6K1 198 aa15.75■□□□□ 0.11
AC004540.1-204ENST00000449537 KIAA0355O15063 1070 aa15.75■□□□□ 0.11
AC004540.1-204ENST00000449537 CLTBP09497 229 aa15.75■□□□□ 0.11
AC004540.1-204ENST00000449537 SLC5A1P13866 664 aa15.75■□□□□ 0.11
AC004540.1-204ENST00000449537 CCNA1P78396 465 aa15.75■□□□□ 0.11
AC004540.1-204ENST00000449537 MTMR2Q13614 643 aa15.75■□□□□ 0.11
AC004540.1-204ENST00000449537 TRPV1Q8NER1 839 aa15.75■□□□□ 0.11
AC004540.1-204ENST00000449537 KAZALD1Q96I82 304 aa15.75■□□□□ 0.11
AC004540.1-204ENST00000449537 WDR18Q9BV38 432 aa15.75■□□□□ 0.11
AC004540.1-204ENST00000449537 GNL3LQ9NVN8 582 aaKnown RBP15.75■□□□□ 0.11
AC004540.1-204ENST00000449537 NDUFB9Q9Y6M9 179 aa15.75■□□□□ 0.11
AC004540.1-204ENST00000449537 GAKO14976 1311 aa15.74■□□□□ 0.11
AC004540.1-204ENST00000449537 SALL1Q9NSC2 1324 aa15.74■□□□□ 0.11
AC004540.1-204ENST00000449537 GPR37L1O60883 481 aa15.74■□□□□ 0.11
AC004540.1-204ENST00000449537 ALDH1L1O75891 902 aa15.74■□□□□ 0.11
AC004540.1-204ENST00000449537 WDR78Q5VTH9 848 aa15.74■□□□□ 0.11
AC004540.1-204ENST00000449537 SLF2Q8IX21 1173 aa15.74■□□□□ 0.11
AC004540.1-204ENST00000449537 LPIN2Q92539 896 aa15.74■□□□□ 0.11
AC004540.1-204ENST00000449537 HOXC6P09630 235 aa15.73■□□□□ 0.11
AC004540.1-204ENST00000449537 PTPREP23469 700 aa15.73■□□□□ 0.11
AC004540.1-204ENST00000449537 PBX2P40425 430 aa15.73■□□□□ 0.11
AC004540.1-204ENST00000449537 RRP1BQ14684 758 aaKnown RBP15.73■□□□□ 0.11
AC004540.1-204ENST00000449537 ANO1Q5XXA6 986 aa15.73■□□□□ 0.11
AC004540.1-204ENST00000449537 NPLOC4Q8TAT6 608 aa15.73■□□□□ 0.11
AC004540.1-204ENST00000449537 FAM163AQ96GL9 167 aaPredicted RBP15.73■□□□□ 0.11
AC004540.1-204ENST00000449537 PBX4Q9BYU1 374 aa15.73■□□□□ 0.11
AC004540.1-204ENST00000449537 RABGAP1Q9Y3P9 1069 aa15.73■□□□□ 0.11
AC004540.1-204ENST00000449537 IVNS1ABPQ9Y6Y0 642 aa15.73■□□□□ 0.11
AC004540.1-204ENST00000449537 RFX7Q2KHR2 1363 aa15.73■□□□□ 0.11
AC004540.1-204ENST00000449537 CACNA1FO60840 1977 aa15.73■□□□□ 0.11
AC004540.1-204ENST00000449537 GRXCR1A8MXD5 290 aa15.72■□□□□ 0.11
AC004540.1-204ENST00000449537 NPM3O75607 178 aaKnown RBP15.72■□□□□ 0.11
AC004540.1-204ENST00000449537 CYBAP13498 195 aa15.72■□□□□ 0.11
AC004540.1-204ENST00000449537 TFF2Q03403 129 aa15.72■□□□□ 0.11
AC004540.1-204ENST00000449537 ZGPATQ8N5A5 531 aaKnown RBP15.72■□□□□ 0.11
AC004540.1-204ENST00000449537 TMEM39AQ9NV64 488 aa15.72■□□□□ 0.11
AC004540.1-204ENST00000449537 DENND2AQ9ULE3 1009 aa15.72■□□□□ 0.11
AC004540.1-204ENST00000449537 MYH2Q9UKX2 1941 aa15.72■□□□□ 0.11
AC004540.1-204ENST00000449537 MYH13Q9UKX3 1938 aa15.72■□□□□ 0.11
AC004540.1-204ENST00000449537 USP17L10C9JJH3 530 aa15.71■□□□□ 0.11
AC004540.1-204ENST00000449537 BTDP43251 543 aa15.71■□□□□ 0.11
AC004540.1-204ENST00000449537 MRE11P49959 708 aa15.71■□□□□ 0.11
AC004540.1-204ENST00000449537 LRRC41Q15345 812 aa15.71■□□□□ 0.11
AC004540.1-204ENST00000449537 DZIP1Q86YF9 867 aaKnown RBP15.71■□□□□ 0.11
AC004540.1-204ENST00000449537 KLHDC4Q8TBB5 520 aa15.71■□□□□ 0.11
AC004540.1-204ENST00000449537 BICC1Q9H694 974 aaKnown RBP15.71■□□□□ 0.11
AC004540.1-204ENST00000449537 SEPT4O43236 478 aa15.7■□□□□ 0.1
AC004540.1-204ENST00000449537 ASNSP08243 561 aa15.7■□□□□ 0.1
AC004540.1-204ENST00000449537 NBPF7P0C2Y1 421 aaPredicted RBP15.7■□□□□ 0.1
AC004540.1-204ENST00000449537 KCNQ1P51787 676 aa15.7■□□□□ 0.1
AC004540.1-204ENST00000449537 RABL6Q3YEC7 729 aaPredicted RBP15.7■□□□□ 0.1
AC004540.1-204ENST00000449537 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.7■□□□□ 0.1
AC004540.1-204ENST00000449537 SRCIN1Q9C0H9 1055 aa15.7■□□□□ 0.1
AC004540.1-204ENST00000449537 MSRAQ9UJ68 235 aa15.7■□□□□ 0.1
AC004540.1-204ENST00000449537 PLXNA1Q9UIW2 1896 aa15.69■□□□□ 0.1
AC004540.1-204ENST00000449537 SEMA3EO15041 775 aa15.69■□□□□ 0.1
AC004540.1-204ENST00000449537 PQBP1O60828 265 aaKnown RBP15.69■□□□□ 0.1
AC004540.1-204ENST00000449537 IGHA2P01877 340 aa15.69■□□□□ 0.1
AC004540.1-204ENST00000449537 NCBP3Q53F19 620 aaKnown RBP15.69■□□□□ 0.1
AC004540.1-204ENST00000449537 CCDC174Q6PII3 467 aa15.69■□□□□ 0.1
AC004540.1-204ENST00000449537 SLC4A10Q6U841 1118 aa15.69■□□□□ 0.1
AC004540.1-204ENST00000449537 DPP9Q86TI2 863 aa15.69■□□□□ 0.1
AC004540.1-204ENST00000449537 SLC44A5Q8NCS7 719 aa15.69■□□□□ 0.1
AC004540.1-204ENST00000449537 HERC5Q9UII4 1024 aaKnown RBP15.69■□□□□ 0.1
AC004540.1-204ENST00000449537 GPR75-ASB3A0A0A6YYF3 556 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms