RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 XAGE2Q96GT9 111 aa15.29■□□□□ 0.04
SYNGAP1-204ENST00000449372 A1CFQ9NQ94 594 aaKnown RBP15.29■□□□□ 0.04
SYNGAP1-204ENST00000449372 CEP126Q9P2H0 1117 aa15.29■□□□□ 0.04
SYNGAP1-204ENST00000449372 L1RE1Q9UN81 338 aa15.29■□□□□ 0.04
SYNGAP1-204ENST00000449372 LOC102724428A0A0B4J2F2 783 aa15.29■□□□□ 0.04
SYNGAP1-204ENST00000449372 FOXP2O15409 715 aa15.29■□□□□ 0.04
SYNGAP1-204ENST00000449372 ITGA6P23229 1130 aa15.29■□□□□ 0.04
SYNGAP1-204ENST00000449372 RDXP35241 583 aaKnown RBP15.29■□□□□ 0.04
SYNGAP1-204ENST00000449372 SIK1P57059 783 aa15.29■□□□□ 0.04
SYNGAP1-204ENST00000449372 ZNF512BQ96KM6 892 aaPredicted RBP15.29■□□□□ 0.04
SYNGAP1-204ENST00000449372 WDR24Q96S15 920 aa15.29■□□□□ 0.04
SYNGAP1-204ENST00000449372 CCDC87Q9NVE4 849 aa15.29■□□□□ 0.04
SYNGAP1-204ENST00000449372 TBC1D2BQ9UPU7 963 aa15.29■□□□□ 0.04
SYNGAP1-204ENST00000449372 FAM169AQ9Y6X4 670 aa15.29■□□□□ 0.04
SYNGAP1-204ENST00000449372 CTCFLQ8NI51 663 aaPredicted RBP15.29■□□□□ 0.04
SYNGAP1-204ENST00000449372 N4BP2L2Q92802 583 aaPredicted RBP15.29■□□□□ 0.04
SYNGAP1-204ENST00000449372 IRS4O14654 1257 aaPredicted RBP15.28■□□□□ 0.04
SYNGAP1-204ENST00000449372 CYP21A2P08686 494 aa15.28■□□□□ 0.04
SYNGAP1-204ENST00000449372 PAX7P23759 505 aa15.28■□□□□ 0.04
SYNGAP1-204ENST00000449372 SCARF1Q14162 830 aa15.28■□□□□ 0.04
SYNGAP1-204ENST00000449372 CLIC6Q96NY7 704 aa15.28■□□□□ 0.04
SYNGAP1-204ENST00000449372 DSCC1Q9BVC3 393 aa15.28■□□□□ 0.04
SYNGAP1-204ENST00000449372 ZBTB12Q9Y330 459 aaPredicted RBP15.28■□□□□ 0.04
SYNGAP1-204ENST00000449372 NHSQ6T4R5 1651 aa15.28■□□□□ 0.04
SYNGAP1-204ENST00000449372 EBAG9O00559 213 aa15.28■□□□□ 0.04
SYNGAP1-204ENST00000449372 PDE8AO60658 829 aa15.28■□□□□ 0.04
SYNGAP1-204ENST00000449372 ABCB6Q9NP58 842 aa15.28■□□□□ 0.04
SYNGAP1-204ENST00000449372 VWA3AA6NCI4 1184 aa15.28■□□□□ 0.04
SYNGAP1-204ENST00000449372 NF2P35240 595 aa15.28■□□□□ 0.04
SYNGAP1-204ENST00000449372 ZNF274Q96GC6 653 aaPredicted RBP15.28■□□□□ 0.04
SYNGAP1-204ENST00000449372 ACSBG1Q96GR2 724 aa15.28■□□□□ 0.04
SYNGAP1-204ENST00000449372 CDKL5O76039 1030 aa15.27■□□□□ 0.04
SYNGAP1-204ENST00000449372 YEATS4O95619 227 aa15.27■□□□□ 0.04
SYNGAP1-204ENST00000449372 SLC3A2P08195 630 aaKnown RBP15.27■□□□□ 0.04
SYNGAP1-204ENST00000449372 IFIT1P09914 478 aaKnown RBP15.27■□□□□ 0.04
SYNGAP1-204ENST00000449372 INPP5BP32019 993 aa15.27■□□□□ 0.04
SYNGAP1-204ENST00000449372 BPIFA3Q9BQP9 254 aa15.27■□□□□ 0.04
SYNGAP1-204ENST00000449372 MAST3O60307 1309 aa15.27■□□□□ 0.04
SYNGAP1-204ENST00000449372 KLHL33A6NCF5 533 aa15.27■□□□□ 0.04
SYNGAP1-204ENST00000449372 CCT5P48643 541 aa15.27■□□□□ 0.04
SYNGAP1-204ENST00000449372 CEBPZQ03701 1054 aaKnown RBP15.27■□□□□ 0.04
SYNGAP1-204ENST00000449372 SUSD4Q5VX71 490 aa15.27■□□□□ 0.04
SYNGAP1-204ENST00000449372 AFAP1L1Q8TED9 768 aa15.27■□□□□ 0.04
SYNGAP1-204ENST00000449372 DHX58Q96C10 678 aa15.27■□□□□ 0.04
SYNGAP1-204ENST00000449372 CABS1Q96KC9 395 aa15.27■□□□□ 0.04
SYNGAP1-204ENST00000449372 DACH1Q9UI36 760 aa15.27■□□□□ 0.04
SYNGAP1-204ENST00000449372 PTPDC1A2A3K4 754 aa15.27■□□□□ 0.03
SYNGAP1-204ENST00000449372 TOM1O60784 492 aa15.27■□□□□ 0.03
SYNGAP1-204ENST00000449372 CHMP4BP1P59074 171 aa15.27■□□□□ 0.03
SYNGAP1-204ENST00000449372 CASP8Q14790 479 aa15.27■□□□□ 0.03
SYNGAP1-204ENST00000449372 STOX1Q6ZVD7 989 aa15.27■□□□□ 0.03
SYNGAP1-204ENST00000449372 POTEDQ86YR6 584 aa15.27■□□□□ 0.03
SYNGAP1-204ENST00000449372 CCDC85AQ96PX6 553 aaPredicted RBP15.27■□□□□ 0.03
SYNGAP1-204ENST00000449372 BTAF1O14981 1849 aa15.27■□□□□ 0.03
SYNGAP1-204ENST00000449372 ERCC3P19447 782 aa15.26■□□□□ 0.03
SYNGAP1-204ENST00000449372 ADALQ6DHV7 355 aa15.26■□□□□ 0.03
SYNGAP1-204ENST00000449372 RALYLQ86SE5 291 aaKnown RBP15.26■□□□□ 0.03
SYNGAP1-204ENST00000449372 FMNL3Q8IVF7 1028 aa15.26■□□□□ 0.03
SYNGAP1-204ENST00000449372 SMARCC2Q8TAQ2 1214 aa15.26■□□□□ 0.03
SYNGAP1-204ENST00000449372 KCNQ2O43526 872 aa15.26■□□□□ 0.03
SYNGAP1-204ENST00000449372 USP5P45974 858 aa15.26■□□□□ 0.03
SYNGAP1-204ENST00000449372 TUBB4BP68371 445 aa15.26■□□□□ 0.03
SYNGAP1-204ENST00000449372 TEX11Q8IYF3 940 aa15.26■□□□□ 0.03
SYNGAP1-204ENST00000449372 ERCC4Q92889 916 aaPredicted RBP15.26■□□□□ 0.03
SYNGAP1-204ENST00000449372 TRMT112Q9UI30 125 aaKnown RBP15.26■□□□□ 0.03
SYNGAP1-204ENST00000449372 COL24A1Q17RW2 1714 aa15.26■□□□□ 0.03
SYNGAP1-204ENST00000449372 RTL9Q8NET4 1388 aa15.26■□□□□ 0.03
SYNGAP1-204ENST00000449372 RNF113AO15541 343 aaKnown RBP15.26■□□□□ 0.03
SYNGAP1-204ENST00000449372 FGFR2P21802 821 aa15.26■□□□□ 0.03
SYNGAP1-204ENST00000449372 IRX1P78414 480 aaPredicted RBP15.26■□□□□ 0.03
SYNGAP1-204ENST00000449372 VPS72Q15906 364 aa15.26■□□□□ 0.03
SYNGAP1-204ENST00000449372 ANKZF1Q9H8Y5 726 aa15.26■□□□□ 0.03
SYNGAP1-204ENST00000449372 LY75O60449 1722 aa15.26■□□□□ 0.03
SYNGAP1-204ENST00000449372 NUTM2BA6NNL0 878 aaPredicted RBP15.25■□□□□ 0.03
SYNGAP1-204ENST00000449372 NUTM2EB1AL46 878 aaPredicted RBP15.25■□□□□ 0.03
SYNGAP1-204ENST00000449372 POTEB2H3BUK9 544 aa15.25■□□□□ 0.03
SYNGAP1-204ENST00000449372 NUTM2AQ8IVF1 878 aaPredicted RBP15.25■□□□□ 0.03
SYNGAP1-204ENST00000449372 C8orf76Q96K31 380 aa15.25■□□□□ 0.03
SYNGAP1-204ENST00000449372 MCM8Q9UJA3 840 aa15.25■□□□□ 0.03
SYNGAP1-204ENST00000449372 PPP2R2CQ9Y2T4 447 aa15.25■□□□□ 0.03
SYNGAP1-204ENST00000449372 ATRNO75882 1429 aa15.25■□□□□ 0.03
SYNGAP1-204ENST00000449372 M0R2C6 588 aa15.25■□□□□ 0.03
SYNGAP1-204ENST00000449372 GCFC2P16383 781 aaKnown RBP15.25■□□□□ 0.03
SYNGAP1-204ENST00000449372 TRIM29Q14134 588 aa15.25■□□□□ 0.03
SYNGAP1-204ENST00000449372 TAF1LQ8IZX4 1826 aa15.25■□□□□ 0.03
SYNGAP1-204ENST00000449372 RNF40O75150 1001 aa15.25■□□□□ 0.03
SYNGAP1-204ENST00000449372 ZFYP08048 801 aaPredicted RBP15.25■□□□□ 0.03
SYNGAP1-204ENST00000449372 FCHSD1Q86WN1 690 aa15.25■□□□□ 0.03
SYNGAP1-204ENST00000449372 FNBP4Q8N3X1 1017 aaPredicted RBP15.25■□□□□ 0.03
SYNGAP1-204ENST00000449372 PRPF38AQ8NAV1 312 aaKnown RBP15.25■□□□□ 0.03
SYNGAP1-204ENST00000449372 OSBP2Q969R2 916 aa15.25■□□□□ 0.03
SYNGAP1-204ENST00000449372 TCEANC2Q96MN5 208 aa15.25■□□□□ 0.03
SYNGAP1-204ENST00000449372 PNKPQ96T60 521 aa15.25■□□□□ 0.03
SYNGAP1-204ENST00000449372 AGXT2Q9BYV1 514 aa15.25■□□□□ 0.03
SYNGAP1-204ENST00000449372 SBF2Q86WG5 1849 aa15.25■□□□□ 0.03
SYNGAP1-204ENST00000449372 ANKRD18BA2A2Z9 1011 aa15.24■□□□□ 0.03
SYNGAP1-204ENST00000449372 HSPD1P10809 573 aaKnown RBP15.24■□□□□ 0.03
SYNGAP1-204ENST00000449372 WDHD1O75717 1129 aaPredicted RBP15.24■□□□□ 0.03
SYNGAP1-204ENST00000449372 ECM2O94769 699 aaPredicted RBP15.24■□□□□ 0.03
SYNGAP1-204ENST00000449372 NTSR2O95665 410 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms