RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 MRE11P49959 708 aa7.2□□□□□ -1.26
SDCBP-205ENST00000447267 CAP1Q01518 475 aa7.2□□□□□ -1.26
SDCBP-205ENST00000447267 NOM1Q5C9Z4 860 aaKnown RBP7.2□□□□□ -1.26
SDCBP-205ENST00000447267 C1orf53Q5VUE5 145 aa7.2□□□□□ -1.26
SDCBP-205ENST00000447267 STYK1Q6J9G0 422 aa7.2□□□□□ -1.26
SDCBP-205ENST00000447267 SYT9Q86SS6 491 aa7.2□□□□□ -1.26
SDCBP-205ENST00000447267 PPP1R12CQ9BZL4 782 aa7.2□□□□□ -1.26
SDCBP-205ENST00000447267 STARD13Q9Y3M8 1113 aa7.2□□□□□ -1.26
SDCBP-205ENST00000447267 CGNL1Q0VF96 1302 aa7.2□□□□□ -1.26
SDCBP-205ENST00000447267 MAP3K19Q56UN5 1328 aa7.2□□□□□ -1.26
SDCBP-205ENST00000447267 A6NJR5 290 aa7.19□□□□□ -1.26
SDCBP-205ENST00000447267 PPP1R12BO60237 982 aaPredicted RBP7.19□□□□□ -1.26
SDCBP-205ENST00000447267 SRGNP10124 158 aa7.19□□□□□ -1.26
SDCBP-205ENST00000447267 TYRO3Q06418 890 aa7.19□□□□□ -1.26
SDCBP-205ENST00000447267 COL9A3Q14050 684 aaPredicted RBP7.19□□□□□ -1.26
SDCBP-205ENST00000447267 PRR5LQ6MZQ0 368 aa7.19□□□□□ -1.26
SDCBP-205ENST00000447267 CD99L2Q8TCZ2 262 aa7.19□□□□□ -1.26
SDCBP-205ENST00000447267 SUSD3Q96L08 255 aa7.19□□□□□ -1.26
SDCBP-205ENST00000447267 C2orf49Q9BVC5 232 aaPredicted RBP7.19□□□□□ -1.26
SDCBP-205ENST00000447267 GPC6Q9Y625 555 aaPredicted RBP7.19□□□□□ -1.26
SDCBP-205ENST00000447267 GNB5O14775 395 aa7.18□□□□□ -1.26
SDCBP-205ENST00000447267 CHRNA4P43681 627 aa7.18□□□□□ -1.26
SDCBP-205ENST00000447267 TM4SF4P48230 202 aa7.18□□□□□ -1.26
SDCBP-205ENST00000447267 AMPHP49418 695 aa7.18□□□□□ -1.26
SDCBP-205ENST00000447267 GMPSP49915 693 aaPredicted RBP7.18□□□□□ -1.26
SDCBP-205ENST00000447267 PTK7Q13308 1070 aa7.18□□□□□ -1.26
SDCBP-205ENST00000447267 LRIT3Q3SXY7 679 aa7.18□□□□□ -1.26
SDCBP-205ENST00000447267 KRT26Q7Z3Y9 468 aa7.18□□□□□ -1.26
SDCBP-205ENST00000447267 RTKN2Q8IZC4 609 aa7.18□□□□□ -1.26
SDCBP-205ENST00000447267 SHISA4Q96DD7 197 aa7.18□□□□□ -1.26
SDCBP-205ENST00000447267 MASTLQ96GX5 879 aa7.18□□□□□ -1.26
SDCBP-205ENST00000447267 NARFQ9UHQ1 456 aa7.18□□□□□ -1.26
SDCBP-205ENST00000447267 PRR12Q9ULL5 1215 aa7.18□□□□□ -1.26
SDCBP-205ENST00000447267 COL4A5P29400 1685 aa7.17□□□□□ -1.26
SDCBP-205ENST00000447267 ADAM23O75077 832 aa7.17□□□□□ -1.26
SDCBP-205ENST00000447267 GRNP28799 593 aaKnown RBP7.17□□□□□ -1.26
SDCBP-205ENST00000447267 SEC13P55735 322 aa7.17□□□□□ -1.26
SDCBP-205ENST00000447267 DPYDQ12882 1025 aa7.17□□□□□ -1.26
SDCBP-205ENST00000447267 TBC1D9BQ66K14 1250 aa7.17□□□□□ -1.26
SDCBP-205ENST00000447267 C8orf86Q6ZUL3 223 aa7.17□□□□□ -1.26
SDCBP-205ENST00000447267 MOB2Q70IA6 237 aa7.17□□□□□ -1.26
SDCBP-205ENST00000447267 CD163Q86VB7 1156 aa7.17□□□□□ -1.26
SDCBP-205ENST00000447267 ALDH16A1Q8IZ83 802 aa7.17□□□□□ -1.26
SDCBP-205ENST00000447267 SCG3Q8WXD2 468 aaKnown RBP7.17□□□□□ -1.26
SDCBP-205ENST00000447267 CDX2Q99626 313 aaPredicted RBP7.17□□□□□ -1.26
SDCBP-205ENST00000447267 GDF15Q99988 308 aa7.17□□□□□ -1.26
SDCBP-205ENST00000447267 LRFN3Q9BTN0 628 aa7.17□□□□□ -1.26
SDCBP-205ENST00000447267 HTATIP2Q9BUP3 242 aa7.17□□□□□ -1.26
SDCBP-205ENST00000447267 EFCC1Q9HA90 598 aa7.17□□□□□ -1.26
SDCBP-205ENST00000447267 SLX4Q8IY92 1834 aa7.17□□□□□ -1.26
SDCBP-205ENST00000447267 KTN1Q86UP2 1357 aaKnown RBP7.17□□□□□ -1.26
SDCBP-205ENST00000447267 FAM208AQ9UK61 1670 aaKnown RBP7.16□□□□□ -1.26
SDCBP-205ENST00000447267 ELOA3CA0A087WX78 387 aaPredicted RBP7.16□□□□□ -1.26
SDCBP-205ENST00000447267 ELOA3DA6NLF2 546 aaPredicted RBP7.16□□□□□ -1.26
SDCBP-205ENST00000447267 C1QTNF9BB2RNN3 333 aa7.16□□□□□ -1.26
SDCBP-205ENST00000447267 KRT37O76014 449 aa7.16□□□□□ -1.26
SDCBP-205ENST00000447267 SPEM2Q0P670 501 aa7.16□□□□□ -1.26
SDCBP-205ENST00000447267 ELOA3BQ3SY89 546 aa7.16□□□□□ -1.26
SDCBP-205ENST00000447267 SLC9C1Q4G0N8 1177 aa7.16□□□□□ -1.26
SDCBP-205ENST00000447267 SLC51AQ86UW1 340 aa7.16□□□□□ -1.26
SDCBP-205ENST00000447267 STAG2Q8N3U4 1231 aa7.16□□□□□ -1.26
SDCBP-205ENST00000447267 ELOA3Q8NG57 546 aa7.16□□□□□ -1.26
SDCBP-205ENST00000447267 DCAF11Q8TEB1 546 aa7.16□□□□□ -1.26
SDCBP-205ENST00000447267 SH3TC2Q8TF17 1288 aa7.16□□□□□ -1.26
SDCBP-205ENST00000447267 CALR3Q96L12 384 aaKnown RBP7.16□□□□□ -1.26
SDCBP-205ENST00000447267 BRD7Q9NPI1 651 aa7.16□□□□□ -1.26
SDCBP-205ENST00000447267 PTCH2Q9Y6C5 1203 aa7.16□□□□□ -1.26
SDCBP-205ENST00000447267 PIEZO1Q92508 2521 aa7.16□□□□□ -1.26
SDCBP-205ENST00000447267 AKAP11Q9UKA4 1901 aa7.15□□□□□ -1.26
SDCBP-205ENST00000447267 ADARB2-AS1A8MUL3 147 aa7.15□□□□□ -1.26
SDCBP-205ENST00000447267 USP17L15C9J2P7 530 aa7.15□□□□□ -1.26
SDCBP-205ENST00000447267 USP17L10C9JJH3 530 aa7.15□□□□□ -1.26
SDCBP-205ENST00000447267 USP17L13C9JLJ4 530 aa7.15□□□□□ -1.26
SDCBP-205ENST00000447267 USP17L12C9JPN9 530 aa7.15□□□□□ -1.26
SDCBP-205ENST00000447267 USP17L11C9JVI0 530 aa7.15□□□□□ -1.26
SDCBP-205ENST00000447267 USP17L21D6R901 530 aa7.15□□□□□ -1.26
SDCBP-205ENST00000447267 USP17L18D6R9N7 530 aa7.15□□□□□ -1.26
SDCBP-205ENST00000447267 USP17L22D6RA61 530 aa7.15□□□□□ -1.26
SDCBP-205ENST00000447267 USP17L17D6RBQ6 530 aa7.15□□□□□ -1.26
SDCBP-205ENST00000447267 USP17L19D6RCP7 530 aa7.15□□□□□ -1.26
SDCBP-205ENST00000447267 USP17L20D6RJB6 530 aa7.15□□□□□ -1.26
SDCBP-205ENST00000447267 SIN3BO75182 1162 aa7.15□□□□□ -1.26
SDCBP-205ENST00000447267 ALBP02768 609 aa7.15□□□□□ -1.26
SDCBP-205ENST00000447267 USP17L24Q0WX57 530 aa7.15□□□□□ -1.26
SDCBP-205ENST00000447267 NBPF11Q86T75 865 aa7.15□□□□□ -1.26
SDCBP-205ENST00000447267 CEP63Q96MT8 703 aa7.15□□□□□ -1.26
SDCBP-205ENST00000447267 DMGDHQ9UI17 866 aaKnown RBP7.15□□□□□ -1.26
SDCBP-205ENST00000447267 DLEC1Q9Y238 1755 aa7.15□□□□□ -1.27
SDCBP-205ENST00000447267 UBE2Q2LH0YL09 131 aa7.14□□□□□ -1.27
SDCBP-205ENST00000447267 BMP8BP34820 402 aa7.14□□□□□ -1.27
SDCBP-205ENST00000447267 HTTP42858 3142 aa7.14□□□□□ -1.27
SDCBP-205ENST00000447267 CXCL9Q07325 125 aa7.14□□□□□ -1.27
SDCBP-205ENST00000447267 SOS1Q07889 1333 aaPredicted RBP7.14□□□□□ -1.27
SDCBP-205ENST00000447267 UBE2Q1Q7Z7E8 422 aa7.14□□□□□ -1.27
SDCBP-205ENST00000447267 TNFRSF25Q93038 417 aa7.14□□□□□ -1.27
SDCBP-205ENST00000447267 PLVAPQ9BX97 442 aa7.14□□□□□ -1.27
SDCBP-205ENST00000447267 C1QTNF1Q9BXJ1 281 aa7.14□□□□□ -1.27
SDCBP-205ENST00000447267 ZMYND8Q9ULU4 1186 aaPredicted RBP7.14□□□□□ -1.27
SDCBP-205ENST00000447267 ITGB4P16144 1822 aa7.13□□□□□ -1.27
SDCBP-205ENST00000447267 AFDNP55196 1824 aaKnown RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms