RNA–Protein interactions for RNA: ENST00000446922.6

HMGB2-203, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-203ENST00000446922 HMGCS2P54868 508 aa18.86■□□□□ 0.61
HMGB2-203ENST00000446922 TREML2Q5T2D2 321 aa18.86■□□□□ 0.61
HMGB2-203ENST00000446922 CCDC84Q86UT8 332 aaPredicted RBP18.86■□□□□ 0.61
HMGB2-203ENST00000446922 CRNKL1Q9BZJ0 848 aaKnown RBP18.86■□□□□ 0.61
HMGB2-203ENST00000446922 TMOD4Q9NZQ9 345 aa18.86■□□□□ 0.61
HMGB2-203ENST00000446922 SAP30BPQ9UHR5 308 aaKnown RBP18.86■□□□□ 0.61
HMGB2-203ENST00000446922 GOLIM4O00461 696 aa18.85■□□□□ 0.61
HMGB2-203ENST00000446922 IRF5Q13568 498 aa18.85■□□□□ 0.61
HMGB2-203ENST00000446922 SLC4A8Q2Y0W8 1093 aa18.85■□□□□ 0.61
HMGB2-203ENST00000446922 C20orf194Q5TEA3 1177 aa18.85■□□□□ 0.61
HMGB2-203ENST00000446922 SLAIN1Q8ND83 568 aa18.85■□□□□ 0.61
HMGB2-203ENST00000446922 HAUS7Q99871 368 aa18.85■□□□□ 0.61
HMGB2-203ENST00000446922 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.85■□□□□ 0.615e-67■□□□□ 9.1
HMGB2-203ENST00000446922 PAG1Q9NWQ8 432 aa18.85■□□□□ 0.61
HMGB2-203ENST00000446922 ZBTB21Q9ULJ3 1066 aa18.85■□□□□ 0.61
HMGB2-203ENST00000446922 LOC285556D6RIA3 1793 aa18.85■□□□□ 0.61
HMGB2-203ENST00000446922 TCRBV5S4A2TA0A5A2 114 aa18.84■□□□□ 0.61
HMGB2-203ENST00000446922 EN2P19622 333 aaPredicted RBP18.84■□□□□ 0.61
HMGB2-203ENST00000446922 UBXN2AP68543 259 aa18.84■□□□□ 0.61
HMGB2-203ENST00000446922 NKX2-3Q8TAU0 364 aa18.84■□□□□ 0.61
HMGB2-203ENST00000446922 PXYLP1Q8TE99 480 aa18.84■□□□□ 0.61
HMGB2-203ENST00000446922 SH3TC2Q8TF17 1288 aa18.84■□□□□ 0.61
HMGB2-203ENST00000446922 COA7Q96BR5 231 aa18.84■□□□□ 0.61
HMGB2-203ENST00000446922 DNAJC2Q99543 621 aaKnown RBP18.84■□□□□ 0.61
HMGB2-203ENST00000446922 ASCC2Q9H1I8 757 aaPredicted RBP18.84■□□□□ 0.61
HMGB2-203ENST00000446922 ZNF532Q9HCE3 1301 aa18.83■□□□□ 0.61
HMGB2-203ENST00000446922 MYH1P12882 1939 aa18.83■□□□□ 0.6
HMGB2-203ENST00000446922 MTMR2Q13614 643 aa18.83■□□□□ 0.6
HMGB2-203ENST00000446922 ZSCAN25Q6NSZ9 544 aa18.83■□□□□ 0.6
HMGB2-203ENST00000446922 GTF3C2Q8WUA4 911 aaPredicted RBP18.83■□□□□ 0.6
HMGB2-203ENST00000446922 DCTPP1Q9H773 170 aa18.83■□□□□ 0.6
HMGB2-203ENST00000446922 MORF4L1Q9UBU8 362 aa18.83■□□□□ 0.6
HMGB2-203ENST00000446922 TNPO2O14787 897 aaKnown RBP18.82■□□□□ 0.6
HMGB2-203ENST00000446922 USP14P54578 494 aa18.82■□□□□ 0.6
HMGB2-203ENST00000446922 JAG1P78504 1218 aa18.82■□□□□ 0.6
HMGB2-203ENST00000446922 PRKCZQ05513 592 aa18.82■□□□□ 0.6
HMGB2-203ENST00000446922 CERKLQ49MI3 558 aaPredicted RBP18.82■□□□□ 0.6
HMGB2-203ENST00000446922 USP17L2Q6R6M4 530 aa18.82■□□□□ 0.6
HMGB2-203ENST00000446922 ANKRD13CQ8N6S4 541 aa18.82■□□□□ 0.6
HMGB2-203ENST00000446922 BOLA2Q9H3K6 86 aa18.82■□□□□ 0.6
HMGB2-203ENST00000446922 CABP5Q9NP86 173 aa18.82■□□□□ 0.6
HMGB2-203ENST00000446922 ATP8A2Q9NTI2 1148 aa18.82■□□□□ 0.6
HMGB2-203ENST00000446922 MGAMO43451 1857 aa18.82■□□□□ 0.6
HMGB2-203ENST00000446922 PDE4DIPQ5VU43 2346 aa18.82■□□□□ 0.6
HMGB2-203ENST00000446922 ZSWIM8A7E2V4 1837 aa18.81■□□□□ 0.6
HMGB2-203ENST00000446922 POLR3DP05423 398 aaPredicted RBP18.81■□□□□ 0.6
HMGB2-203ENST00000446922 ADD2P35612 726 aa18.81■□□□□ 0.6
HMGB2-203ENST00000446922 IRX3P78415 501 aaPredicted RBP18.81■□□□□ 0.6
HMGB2-203ENST00000446922 GABPAQ06546 454 aa18.81■□□□□ 0.6
HMGB2-203ENST00000446922 UBE3CQ15386 1083 aa18.81■□□□□ 0.6
HMGB2-203ENST00000446922 C12orf42Q96LP6 360 aa18.81■□□□□ 0.6
HMGB2-203ENST00000446922 RNF216Q9NWF9 866 aaPredicted RBP18.81■□□□□ 0.6
HMGB2-203ENST00000446922 MKI67P46013 3256 aaKnown RBP18.8■□□□□ 0.6
HMGB2-203ENST00000446922 BRCA2P51587 3418 aa18.8■□□□□ 0.6
HMGB2-203ENST00000446922 ADCY3O60266 1144 aa18.8■□□□□ 0.6
HMGB2-203ENST00000446922 GDF11O95390 407 aa18.8■□□□□ 0.6
HMGB2-203ENST00000446922 GH2P01242 217 aa18.8■□□□□ 0.6
HMGB2-203ENST00000446922 GJB1P08034 283 aa18.8■□□□□ 0.6
HMGB2-203ENST00000446922 FLT3LGP49771 235 aa18.8■□□□□ 0.6
HMGB2-203ENST00000446922 PLCD1P51178 756 aa18.8■□□□□ 0.6
HMGB2-203ENST00000446922 ABCB5Q2M3G0 1257 aa18.8■□□□□ 0.6
HMGB2-203ENST00000446922 GABRQQ9UN88 632 aa18.8■□□□□ 0.6
HMGB2-203ENST00000446922 KIAA1683Q9H0B3 1180 aa18.79■□□□□ 0.6
HMGB2-203ENST00000446922 DCP1AQ9NPI6 582 aaPredicted RBP18.79■□□□□ 0.6
HMGB2-203ENST00000446922 ECHDC1Q9NTX5 307 aa18.79■□□□□ 0.6
HMGB2-203ENST00000446922 MCM9Q9NXL9 1143 aa18.79■□□□□ 0.6
HMGB2-203ENST00000446922 BIN2Q9UBW5 565 aaPredicted RBP18.79■□□□□ 0.6
HMGB2-203ENST00000446922 SWAP70Q9UH65 585 aa18.79■□□□□ 0.6
HMGB2-203ENST00000446922 KIAA0100Q14667 2235 aaKnown RBP18.79■□□□□ 0.6
HMGB2-203ENST00000446922 SHMT1P34896 483 aa18.78■□□□□ 0.6
HMGB2-203ENST00000446922 GJA8P48165 433 aa18.78■□□□□ 0.6
HMGB2-203ENST00000446922 HERVK_113P62684 666 aa18.78■□□□□ 0.6
HMGB2-203ENST00000446922 GCC1Q96CN9 775 aa18.78■□□□□ 0.6
HMGB2-203ENST00000446922 GPATCH3Q96I76 525 aa18.78■□□□□ 0.6
HMGB2-203ENST00000446922 P2RX7Q99572 595 aaKnown RBP18.78■□□□□ 0.6
HMGB2-203ENST00000446922 EMILIN3Q9NT22 766 aa18.78■□□□□ 0.6
HMGB2-203ENST00000446922 USP17L15C9J2P7 530 aa18.77■□□□□ 0.6
HMGB2-203ENST00000446922 USP17L13C9JLJ4 530 aa18.77■□□□□ 0.6
HMGB2-203ENST00000446922 USP17L11C9JVI0 530 aa18.77■□□□□ 0.6
HMGB2-203ENST00000446922 USP17L18D6R9N7 530 aa18.77■□□□□ 0.6
HMGB2-203ENST00000446922 USP17L22D6RA61 530 aa18.77■□□□□ 0.6
HMGB2-203ENST00000446922 USP17L17D6RBQ6 530 aa18.77■□□□□ 0.6
HMGB2-203ENST00000446922 USP17L19D6RCP7 530 aa18.77■□□□□ 0.6
HMGB2-203ENST00000446922 USP17L20D6RJB6 530 aa18.77■□□□□ 0.6
HMGB2-203ENST00000446922 ECM2O94769 699 aaPredicted RBP18.77■□□□□ 0.6
HMGB2-203ENST00000446922 CCL5P13501 91 aa18.77■□□□□ 0.6
HMGB2-203ENST00000446922 USP17L24Q0WX57 530 aa18.77■□□□□ 0.6
HMGB2-203ENST00000446922 MTFR1Q15390 333 aa18.77■□□□□ 0.6
HMGB2-203ENST00000446922 AMOTL1Q8IY63 956 aa18.77■□□□□ 0.6
HMGB2-203ENST00000446922 LCORLQ8N3X6 602 aa18.77■□□□□ 0.6
HMGB2-203ENST00000446922 GPRC5AQ8NFJ5 357 aa18.77■□□□□ 0.6
HMGB2-203ENST00000446922 EDC3Q96F86 508 aaKnown RBP18.77■□□□□ 0.6
HMGB2-203ENST00000446922 DDRGK1Q96HY6 314 aa18.77■□□□□ 0.6
HMGB2-203ENST00000446922 RAB3GAP1Q15042 981 aa18.76■□□□□ 0.59
HMGB2-203ENST00000446922 RNF208Q9H0X6 261 aa18.76■□□□□ 0.59
HMGB2-203ENST00000446922 GJD2Q9UKL4 321 aa18.76■□□□□ 0.59
HMGB2-203ENST00000446922 DDX60LQ5H9U9 1706 aaKnown RBP18.75■□□□□ 0.59
HMGB2-203ENST00000446922 MAPK4P31152 587 aa18.75■□□□□ 0.59
HMGB2-203ENST00000446922 SHROOM1Q2M3G4 852 aaPredicted RBP18.75■□□□□ 0.59
HMGB2-203ENST00000446922 LBX2Q6XYB7 198 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms