RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 RSAD1Q9HA92 442 aa4.64□□□□□ -1.67
UBR3-206ENST00000444475 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.64□□□□□ -1.67
UBR3-206ENST00000444475 AASDHPPTQ9NRN7 309 aa4.64□□□□□ -1.67
UBR3-206ENST00000444475 MKS1Q9NXB0 559 aa4.64□□□□□ -1.67
UBR3-206ENST00000444475 FKBPLQ9UIM3 349 aa4.64□□□□□ -1.67
UBR3-206ENST00000444475 CPLX1O14810 134 aa4.64□□□□□ -1.67
UBR3-206ENST00000444475 GARTP22102 1010 aa4.64□□□□□ -1.67
UBR3-206ENST00000444475 ANP32AP39687 249 aaKnown RBP4.64□□□□□ -1.67
UBR3-206ENST00000444475 ABRAXAS1Q6UWZ7 409 aa4.64□□□□□ -1.67
UBR3-206ENST00000444475 SLC41A1Q8IVJ1 513 aa4.64□□□□□ -1.67
UBR3-206ENST00000444475 TRIM22Q8IYM9 498 aa4.64□□□□□ -1.67
UBR3-206ENST00000444475 MICALL1Q8N3F8 863 aa4.64□□□□□ -1.67
UBR3-206ENST00000444475 DDX11Q96FC9 970 aa4.64□□□□□ -1.67
UBR3-206ENST00000444475 SLC5A4Q9NY91 659 aa4.64□□□□□ -1.67
UBR3-206ENST00000444475 NKIRAS2Q9NYR9 191 aa4.64□□□□□ -1.67
UBR3-206ENST00000444475 HERC5Q9UII4 1024 aaKnown RBP4.64□□□□□ -1.67
UBR3-206ENST00000444475 C3orf80F5H4A9 247 aa4.64□□□□□ -1.67
UBR3-206ENST00000444475 PES1O00541 588 aaKnown RBP4.64□□□□□ -1.67
UBR3-206ENST00000444475 PMM2O15305 246 aa4.64□□□□□ -1.67
UBR3-206ENST00000444475 FRS3O43559 492 aa4.64□□□□□ -1.67
UBR3-206ENST00000444475 KIF1CO43896 1103 aaKnown RBP4.64□□□□□ -1.67
UBR3-206ENST00000444475 HSD3B1P14060 373 aa4.64□□□□□ -1.67
UBR3-206ENST00000444475 IGFBP4P22692 258 aa4.64□□□□□ -1.67
UBR3-206ENST00000444475 TMED1Q13445 227 aa4.64□□□□□ -1.67
UBR3-206ENST00000444475 FAM196AQ6ZSG2 479 aa4.64□□□□□ -1.67
UBR3-206ENST00000444475 FASTKD5Q7L8L6 764 aaKnown RBP4.64□□□□□ -1.67
UBR3-206ENST00000444475 SAPCD2Q86UD0 394 aa4.64□□□□□ -1.67
UBR3-206ENST00000444475 TSGA13Q96PP4 275 aa4.64□□□□□ -1.67
UBR3-206ENST00000444475 TARS2Q9BW92 718 aaKnown RBP4.64□□□□□ -1.67
UBR3-206ENST00000444475 TMEM134Q9H6X4 195 aa4.64□□□□□ -1.67
UBR3-206ENST00000444475 ELAC1Q9H777 363 aaKnown RBP4.64□□□□□ -1.67
UBR3-206ENST00000444475 ANLNQ9NQW6 1124 aa4.64□□□□□ -1.67
UBR3-206ENST00000444475 GTF3C4Q9UKN8 822 aa4.64□□□□□ -1.67
UBR3-206ENST00000444475 DMTF1Q9Y222 760 aa4.64□□□□□ -1.67
UBR3-206ENST00000444475 DCAF1Q9Y4B6 1507 aa4.63□□□□□ -1.67
UBR3-206ENST00000444475 NCAM2O15394 837 aa4.63□□□□□ -1.67
UBR3-206ENST00000444475 GREM1O60565 184 aa4.63□□□□□ -1.67
UBR3-206ENST00000444475 RPS6KB1P23443 525 aa4.63□□□□□ -1.67
UBR3-206ENST00000444475 KCNC4Q03721 635 aa4.63□□□□□ -1.67
UBR3-206ENST00000444475 DPY19L2Q6NUT2 758 aa4.63□□□□□ -1.67
UBR3-206ENST00000444475 TATDN1Q6P1N9 297 aa4.63□□□□□ -1.67
UBR3-206ENST00000444475 ERC1Q8IUD2 1116 aa4.63□□□□□ -1.67
UBR3-206ENST00000444475 DZIP1LQ8IYY4 767 aaKnown RBP4.63□□□□□ -1.67
UBR3-206ENST00000444475 FLCNQ8NFG4 579 aa4.63□□□□□ -1.67
UBR3-206ENST00000444475 DDX20Q9UHI6 824 aaKnown RBP4.63□□□□□ -1.67
UBR3-206ENST00000444475 NCAPD3P42695 1498 aa4.63□□□□□ -1.67
UBR3-206ENST00000444475 LPOP22079 712 aaPredicted RBP4.63□□□□□ -1.67
UBR3-206ENST00000444475 PAX7P23759 505 aa4.63□□□□□ -1.67
UBR3-206ENST00000444475 FXNQ16595 210 aa4.63□□□□□ -1.67
UBR3-206ENST00000444475 GPR158Q5T848 1215 aa4.63□□□□□ -1.67
UBR3-206ENST00000444475 DESI1Q6ICB0 168 aa4.63□□□□□ -1.67
UBR3-206ENST00000444475 GCC1Q96CN9 775 aa4.63□□□□□ -1.67
UBR3-206ENST00000444475 GMCL1Q96IK5 515 aa4.63□□□□□ -1.67
UBR3-206ENST00000444475 RNF39Q9H2S5 420 aa4.63□□□□□ -1.67
UBR3-206ENST00000444475 TRMT13Q9NUP7 481 aaKnown RBP4.63□□□□□ -1.67
UBR3-206ENST00000444475 PIH1D1Q9NWS0 290 aaKnown RBP4.63□□□□□ -1.67
UBR3-206ENST00000444475 SPEF1Q9Y4P9 236 aa4.63□□□□□ -1.67
UBR3-206ENST00000444475 WDR62O43379 1518 aa4.63□□□□□ -1.67
UBR3-206ENST00000444475 ZCCHC6Q5VYS8 1495 aaKnown RBP4.63□□□□□ -1.67
UBR3-206ENST00000444475 MASP2O00187 686 aa4.63□□□□□ -1.67
UBR3-206ENST00000444475 ZBTB39O15060 712 aa4.63□□□□□ -1.67
UBR3-206ENST00000444475 DDX3YO15523 660 aaKnown RBP4.63□□□□□ -1.67
UBR3-206ENST00000444475 GFPT2O94808 682 aa4.63□□□□□ -1.67
UBR3-206ENST00000444475 KRT1P04264 644 aa4.63□□□□□ -1.67
UBR3-206ENST00000444475 CD86P42081 329 aa4.63□□□□□ -1.67
UBR3-206ENST00000444475 ORC1Q13415 861 aa4.63□□□□□ -1.67
UBR3-206ENST00000444475 MINDY4Q4G0A6 757 aa4.63□□□□□ -1.67
UBR3-206ENST00000444475 C1orf228Q6PIY5 440 aa4.63□□□□□ -1.67
UBR3-206ENST00000444475 KCNH8Q96L42 1107 aa4.63□□□□□ -1.67
UBR3-206ENST00000444475 UROC1Q96N76 676 aa4.63□□□□□ -1.67
UBR3-206ENST00000444475 NOC4LQ9BVI4 516 aaKnown RBP4.63□□□□□ -1.67
UBR3-206ENST00000444475 ZFYVE28Q9HCC9 887 aa4.63□□□□□ -1.67
UBR3-206ENST00000444475 TSKSQ9UJT2 592 aa4.63□□□□□ -1.67
UBR3-206ENST00000444475 DNAJC25-GNG10A0A024R161 153 aa4.62□□□□□ -1.67
UBR3-206ENST00000444475 ADCY3O60266 1144 aa4.62□□□□□ -1.67
UBR3-206ENST00000444475 MTHFD1P11586 935 aaKnown RBP4.62□□□□□ -1.67
UBR3-206ENST00000444475 XPAP23025 273 aaPredicted RBP4.62□□□□□ -1.67
UBR3-206ENST00000444475 PAPOLAP51003 745 aaKnown RBP4.62□□□□□ -1.67
UBR3-206ENST00000444475 USP14P54578 494 aa4.62□□□□□ -1.67
UBR3-206ENST00000444475 HMGN5P82970 282 aaKnown RBP4.62□□□□□ -1.67
UBR3-206ENST00000444475 GRIN2CQ14957 1233 aa4.62□□□□□ -1.67
UBR3-206ENST00000444475 HECTD3Q5T447 861 aa4.62□□□□□ -1.67
UBR3-206ENST00000444475 RNF219Q5W0B1 726 aaPredicted RBP4.62□□□□□ -1.67
UBR3-206ENST00000444475 RETSATQ6NUM9 610 aa4.62□□□□□ -1.67
UBR3-206ENST00000444475 RTKN2Q8IZC4 609 aa4.62□□□□□ -1.67
UBR3-206ENST00000444475 STAG2Q8N3U4 1231 aa4.62□□□□□ -1.67
UBR3-206ENST00000444475 STON2Q8WXE9 905 aa4.62□□□□□ -1.67
UBR3-206ENST00000444475 N4BP2L2Q92802 583 aaPredicted RBP4.62□□□□□ -1.67
UBR3-206ENST00000444475 RHOVQ96L33 236 aa4.62□□□□□ -1.67
UBR3-206ENST00000444475 CYP4F11Q9HBI6 524 aa4.62□□□□□ -1.67
UBR3-206ENST00000444475 EPB41L4AQ9HCS5 686 aaPredicted RBP4.62□□□□□ -1.67
UBR3-206ENST00000444475 PDLIM7Q9NR12 457 aa4.62□□□□□ -1.67
UBR3-206ENST00000444475 ST7Q9NRC1 585 aa4.62□□□□□ -1.67
UBR3-206ENST00000444475 PDRG1Q9NUG6 133 aa4.62□□□□□ -1.67
UBR3-206ENST00000444475 IKBKGQ9Y6K9 419 aa4.62□□□□□ -1.67
UBR3-206ENST00000444475 M0R3H8 397 aa4.62□□□□□ -1.67
UBR3-206ENST00000444475 FOXN3O00409 490 aaPredicted RBP4.62□□□□□ -1.67
UBR3-206ENST00000444475 F12P00748 615 aaPredicted RBP4.62□□□□□ -1.67
UBR3-206ENST00000444475 SFTPCP11686 197 aa4.62□□□□□ -1.67
UBR3-206ENST00000444475 MCM4P33991 863 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms