RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 PLCD1P51178 756 aa5.6□□□□□ -1.51
EDEM3-203ENST00000439962 KRT32Q14532 448 aa5.6□□□□□ -1.51
EDEM3-203ENST00000439962 RNF20Q5VTR2 975 aa5.6□□□□□ -1.51
EDEM3-203ENST00000439962 HHIPL2Q6UWX4 724 aa5.6□□□□□ -1.51
EDEM3-203ENST00000439962 INCENPQ9NQS7 918 aa5.6□□□□□ -1.51
EDEM3-203ENST00000439962 LIMCH1Q9UPQ0 1083 aa5.6□□□□□ -1.51
EDEM3-203ENST00000439962 MYO5AQ9Y4I1 1855 aaKnown RBP5.59□□□□□ -1.51
EDEM3-203ENST00000439962 CCL15-CCL14A0A0B4J2E2 113 aa5.59□□□□□ -1.51
EDEM3-203ENST00000439962 RHBDL3P58872 404 aa5.59□□□□□ -1.51
EDEM3-203ENST00000439962 MAP2K1Q02750 393 aaPredicted RBP5.59□□□□□ -1.51
EDEM3-203ENST00000439962 CCL15Q16663 113 aa5.59□□□□□ -1.51
EDEM3-203ENST00000439962 WDR78Q5VTH9 848 aa5.59□□□□□ -1.51
EDEM3-203ENST00000439962 LRSAM1Q6UWE0 723 aa5.59□□□□□ -1.51
EDEM3-203ENST00000439962 ANKRD13AQ8IZ07 590 aa5.59□□□□□ -1.51
EDEM3-203ENST00000439962 SPICE1Q8N0Z3 855 aa5.59□□□□□ -1.51
EDEM3-203ENST00000439962 SPRYD3Q8NCJ5 442 aa5.59□□□□□ -1.51
EDEM3-203ENST00000439962 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.59□□□□□ -1.51
EDEM3-203ENST00000439962 ZBED3Q96IU2 234 aaPredicted RBP5.59□□□□□ -1.51
EDEM3-203ENST00000439962 ZSWIM6Q9HCJ5 1215 aa5.59□□□□□ -1.51
EDEM3-203ENST00000439962 DIAPH3Q9NSV4 1193 aa5.59□□□□□ -1.51
EDEM3-203ENST00000439962 PCDH10Q9P2E7 1040 aa5.59□□□□□ -1.51
EDEM3-203ENST00000439962 MYH2Q9UKX2 1941 aa5.59□□□□□ -1.51
EDEM3-203ENST00000439962 FAM155AB1AL88 458 aaPredicted RBP5.59□□□□□ -1.51
EDEM3-203ENST00000439962 IGF2BP3O00425 579 aaKnown RBP eCLIP5.59□□□□□ -1.51
EDEM3-203ENST00000439962 LDHCP07864 332 aa5.59□□□□□ -1.51
EDEM3-203ENST00000439962 ZKSCAN1P17029 563 aaPredicted RBP5.59□□□□□ -1.51
EDEM3-203ENST00000439962 NCLP19338 710 aaKnown RBP5.59□□□□□ -1.51
EDEM3-203ENST00000439962 PDCP20941 246 aa5.59□□□□□ -1.51
EDEM3-203ENST00000439962 HAND2P61296 217 aa5.59□□□□□ -1.51
EDEM3-203ENST00000439962 MAP3K9P80192 1104 aa5.59□□□□□ -1.51
EDEM3-203ENST00000439962 SPP2Q13103 211 aa5.59□□□□□ -1.51
EDEM3-203ENST00000439962 SLF2Q8IX21 1173 aa5.59□□□□□ -1.51
EDEM3-203ENST00000439962 PDLIM2Q96JY6 352 aa5.59□□□□□ -1.51
EDEM3-203ENST00000439962 PICK1Q9NRD5 415 aa5.59□□□□□ -1.51
EDEM3-203ENST00000439962 WBP1LQ9NX94 342 aa5.59□□□□□ -1.51
EDEM3-203ENST00000439962 RNF186Q9NXI6 227 aa5.59□□□□□ -1.51
EDEM3-203ENST00000439962 ZDHHC9Q9Y397 364 aa5.59□□□□□ -1.51
EDEM3-203ENST00000439962 SNX14Q9Y5W7 946 aa5.59□□□□□ -1.51
EDEM3-203ENST00000439962 SLC4A4Q9Y6R1 1079 aa5.59□□□□□ -1.51
EDEM3-203ENST00000439962 FLT1P17948 1338 aa5.59□□□□□ -1.52
EDEM3-203ENST00000439962 ARAP2Q8WZ64 1704 aa5.59□□□□□ -1.52
EDEM3-203ENST00000439962 NASPP49321 788 aaPredicted RBP5.58□□□□□ -1.52
EDEM3-203ENST00000439962 HMGCS2P54868 508 aa5.58□□□□□ -1.52
EDEM3-203ENST00000439962 GSTO1P78417 241 aa5.58□□□□□ -1.52
EDEM3-203ENST00000439962 RRP1BQ14684 758 aaKnown RBP5.58□□□□□ -1.52
EDEM3-203ENST00000439962 ZSCAN23Q3MJ62 389 aa5.58□□□□□ -1.52
EDEM3-203ENST00000439962 RRP12Q5JTH9 1297 aaKnown RBP5.58□□□□□ -1.52
EDEM3-203ENST00000439962 CWC27Q6UX04 472 aaKnown RBP5.58□□□□□ -1.52
EDEM3-203ENST00000439962 FAM151AQ8WW52 585 aa5.58□□□□□ -1.52
EDEM3-203ENST00000439962 CCDC102AQ96A19 550 aa5.58□□□□□ -1.52
EDEM3-203ENST00000439962 TRIM44Q96DX7 344 aaPredicted RBP5.58□□□□□ -1.52
EDEM3-203ENST00000439962 FAM227BQ96M60 508 aa5.58□□□□□ -1.52
EDEM3-203ENST00000439962 CPA4Q9UI42 421 aa5.58□□□□□ -1.52
EDEM3-203ENST00000439962 GPR75-ASB3A0A0A6YYF3 556 aa5.58□□□□□ -1.52
EDEM3-203ENST00000439962 USP17L12C9JPN9 530 aa5.58□□□□□ -1.52
EDEM3-203ENST00000439962 USP17L21D6R901 530 aa5.58□□□□□ -1.52
EDEM3-203ENST00000439962 SEMA3EO15041 775 aa5.58□□□□□ -1.52
EDEM3-203ENST00000439962 GH2P01242 217 aa5.58□□□□□ -1.52
EDEM3-203ENST00000439962 ATP5JP18859 108 aa5.58□□□□□ -1.52
EDEM3-203ENST00000439962 JAG1P78504 1218 aa5.58□□□□□ -1.52
EDEM3-203ENST00000439962 NECTIN1Q15223 517 aa5.58□□□□□ -1.52
EDEM3-203ENST00000439962 TAF1CQ15572 869 aaPredicted RBP5.58□□□□□ -1.52
EDEM3-203ENST00000439962 SPRYD7Q5W111 196 aa5.58□□□□□ -1.52
EDEM3-203ENST00000439962 MCTP1Q6DN14 999 aa5.58□□□□□ -1.52
EDEM3-203ENST00000439962 MAP4K1Q92918 833 aa5.58□□□□□ -1.52
EDEM3-203ENST00000439962 OSBP2Q969R2 916 aa5.58□□□□□ -1.52
EDEM3-203ENST00000439962 FEZ1Q99689 392 aa5.58□□□□□ -1.52
EDEM3-203ENST00000439962 PTPN18Q99952 460 aa5.58□□□□□ -1.52
EDEM3-203ENST00000439962 OSBPL5Q9H0X9 879 aaPredicted RBP5.58□□□□□ -1.52
EDEM3-203ENST00000439962 MYH7P12883 1935 aa5.58□□□□□ -1.52
EDEM3-203ENST00000439962 SSC5DA1L4H1 1573 aa5.58□□□□□ -1.52
EDEM3-203ENST00000439962 SLC10A3P09131 477 aa5.57□□□□□ -1.52
EDEM3-203ENST00000439962 TDO2P48775 406 aa5.57□□□□□ -1.52
EDEM3-203ENST00000439962 CRHR2Q13324 411 aa5.57□□□□□ -1.52
EDEM3-203ENST00000439962 LRRFIP1Q32MZ4 808 aaKnown RBP5.57□□□□□ -1.52
EDEM3-203ENST00000439962 SMCR8Q8TEV9 937 aaPredicted RBP5.57□□□□□ -1.52
EDEM3-203ENST00000439962 WNK4Q96J92 1243 aa5.57□□□□□ -1.52
EDEM3-203ENST00000439962 ARHGAP39Q9C0H5 1083 aa5.57□□□□□ -1.52
EDEM3-203ENST00000439962 CYP46A1Q9Y6A2 500 aa5.57□□□□□ -1.52
EDEM3-203ENST00000439962 SNCAIPQ9Y6H5 919 aa5.57□□□□□ -1.52
EDEM3-203ENST00000439962 ELP1O95163 1332 aa5.57□□□□□ -1.52
EDEM3-203ENST00000439962 PITPNM2Q9BZ72 1349 aa5.57□□□□□ -1.52
EDEM3-203ENST00000439962 TNRC18O15417 2968 aaPredicted RBP5.57□□□□□ -1.52
EDEM3-203ENST00000439962 ESPNB1AK53 854 aa5.57□□□□□ -1.52
EDEM3-203ENST00000439962 M0R2C6 588 aa5.57□□□□□ -1.52
EDEM3-203ENST00000439962 HMGB1P09429 215 aaKnown RBP5.57□□□□□ -1.52
EDEM3-203ENST00000439962 CTCFP49711 727 aaPredicted RBP5.57□□□□□ -1.52
EDEM3-203ENST00000439962 MTMR2Q13614 643 aa5.57□□□□□ -1.52
EDEM3-203ENST00000439962 DCAF15Q66K64 600 aa5.57□□□□□ -1.52
EDEM3-203ENST00000439962 RUFY3Q7L099 469 aa5.57□□□□□ -1.52
EDEM3-203ENST00000439962 FBXL16Q8N461 479 aa5.57□□□□□ -1.52
EDEM3-203ENST00000439962 MTMR14Q8NCE2 650 aa5.57□□□□□ -1.52
EDEM3-203ENST00000439962 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.57□□□□□ -1.52
EDEM3-203ENST00000439962 ZNF296Q8WUU4 475 aaPredicted RBP5.57□□□□□ -1.52
EDEM3-203ENST00000439962 BRI3BPQ8WY22 251 aa5.57□□□□□ -1.52
EDEM3-203ENST00000439962 PAGR1Q9BTK6 254 aa5.57□□□□□ -1.52
EDEM3-203ENST00000439962 ZNF341Q9BYN7 854 aa5.57□□□□□ -1.52
EDEM3-203ENST00000439962 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.57□□□□□ -1.528e-7■■■■■ 37.5
EDEM3-203ENST00000439962 LAMA4Q16363 1823 aa5.57□□□□□ -1.52
EDEM3-203ENST00000439962 MYCNP04198 464 aaPredicted RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms