RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 CDAN1Q8IWY9 1227 aa13.94□□□□□ -0.18
AC009404.1-202ENST00000439955 SNX21Q969T3 373 aa13.94□□□□□ -0.18
AC009404.1-202ENST00000439955 FAM163AQ96GL9 167 aaPredicted RBP13.94□□□□□ -0.18
AC009404.1-202ENST00000439955 LRCH3Q96II8 777 aa13.94□□□□□ -0.18
AC009404.1-202ENST00000439955 IPO9Q96P70 1041 aaKnown RBP13.94□□□□□ -0.18
AC009404.1-202ENST00000439955 TM6SF1Q9BZW5 370 aa13.94□□□□□ -0.18
AC009404.1-202ENST00000439955 CEP290O15078 2479 aa13.93□□□□□ -0.18
AC009404.1-202ENST00000439955 MROH7-TTC4A0A0A0MT08 1334 aa13.93□□□□□ -0.18
AC009404.1-202ENST00000439955 GAKO14976 1311 aa13.93□□□□□ -0.18
AC009404.1-202ENST00000439955 SPDYE2BA6NHP3 402 aa13.93□□□□□ -0.18
AC009404.1-202ENST00000439955 PATL2C9JE40 543 aaKnown RBP13.93□□□□□ -0.18
AC009404.1-202ENST00000439955 SPDYE6P0CI01 402 aa13.93□□□□□ -0.18
AC009404.1-202ENST00000439955 PPP4CP60510 307 aa13.93□□□□□ -0.18
AC009404.1-202ENST00000439955 BECN1Q14457 450 aa13.93□□□□□ -0.18
AC009404.1-202ENST00000439955 GIMAP6Q6P9H5 292 aa13.93□□□□□ -0.18
AC009404.1-202ENST00000439955 LCORLQ8N3X6 602 aa13.93□□□□□ -0.18
AC009404.1-202ENST00000439955 NACAP1Q9BZK3 213 aa13.93□□□□□ -0.18
AC009404.1-202ENST00000439955 PRO3102Q9H379 93 aa13.93□□□□□ -0.18
AC009404.1-202ENST00000439955 MYH2Q9UKX2 1941 aa13.93□□□□□ -0.18
AC009404.1-202ENST00000439955 A0A0C4DFX4 3053 aa13.92□□□□□ -0.18
AC009404.1-202ENST00000439955 COL6A3P12111 3177 aa13.92□□□□□ -0.18
AC009404.1-202ENST00000439955 BAG3O95817 575 aa13.92□□□□□ -0.18
AC009404.1-202ENST00000439955 PSMA5P28066 241 aa13.92□□□□□ -0.18
AC009404.1-202ENST00000439955 HDLBPQ00341 1268 aaKnown RBP13.92□□□□□ -0.18
AC009404.1-202ENST00000439955 IMMTQ16891 758 aaKnown RBP13.92□□□□□ -0.18
AC009404.1-202ENST00000439955 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.92□□□□□ -0.18
AC009404.1-202ENST00000439955 RASEFQ8IZ41 740 aa13.92□□□□□ -0.18
AC009404.1-202ENST00000439955 MTMR14Q8NCE2 650 aa13.92□□□□□ -0.18
AC009404.1-202ENST00000439955 NOL10Q9BSC4 688 aaKnown RBP13.92□□□□□ -0.18
AC009404.1-202ENST00000439955 MRIQ9BWK5 157 aa13.92□□□□□ -0.18
AC009404.1-202ENST00000439955 ARMT1Q9H993 441 aa13.92□□□□□ -0.18
AC009404.1-202ENST00000439955 ZSWIM8A7E2V4 1837 aa13.92□□□□□ -0.18
AC009404.1-202ENST00000439955 GPR75-ASB3A0A0A6YYF3 556 aa13.91□□□□□ -0.18
AC009404.1-202ENST00000439955 ST18O60284 1047 aa13.91□□□□□ -0.18
AC009404.1-202ENST00000439955 FGAP02671 866 aa13.91□□□□□ -0.18
AC009404.1-202ENST00000439955 CYP21A2P08686 494 aa13.91□□□□□ -0.18
AC009404.1-202ENST00000439955 PLCG2P16885 1265 aa13.91□□□□□ -0.18
AC009404.1-202ENST00000439955 GTF2A2P52657 109 aa13.91□□□□□ -0.18
AC009404.1-202ENST00000439955 LACTBP83111 547 aaPredicted RBP13.91□□□□□ -0.18
AC009404.1-202ENST00000439955 VGLL4Q14135 290 aa13.91□□□□□ -0.18
AC009404.1-202ENST00000439955 KIF22Q14807 665 aa13.91□□□□□ -0.18
AC009404.1-202ENST00000439955 GRIK5Q16478 980 aa13.91□□□□□ -0.18
AC009404.1-202ENST00000439955 HHIPL2Q6UWX4 724 aa13.91□□□□□ -0.18
AC009404.1-202ENST00000439955 MIGA1Q8NAN2 632 aa13.91□□□□□ -0.18
AC009404.1-202ENST00000439955 CRNKL1Q9BZJ0 848 aaKnown RBP13.91□□□□□ -0.18
AC009404.1-202ENST00000439955 ATP8A2Q9NTI2 1148 aa13.91□□□□□ -0.18
AC009404.1-202ENST00000439955 SLC4A4Q9Y6R1 1079 aa13.91□□□□□ -0.18
AC009404.1-202ENST00000439955 LAMB1P07942 1786 aa13.91□□□□□ -0.18
AC009404.1-202ENST00000439955 GSG1L2A8MUP6 293 aa13.9□□□□□ -0.18
AC009404.1-202ENST00000439955 IFNL3Q8IZI9 196 aa13.9□□□□□ -0.18
AC009404.1-202ENST00000439955 HTATIP2Q9BUP3 242 aa13.9□□□□□ -0.18
AC009404.1-202ENST00000439955 NAPBQ9H115 298 aa13.9□□□□□ -0.18
AC009404.1-202ENST00000439955 ZSWIM6Q9HCJ5 1215 aa13.9□□□□□ -0.18
AC009404.1-202ENST00000439955 EPB41L4AQ9HCS5 686 aaPredicted RBP13.9□□□□□ -0.18
AC009404.1-202ENST00000439955 TLR2O60603 784 aa13.89□□□□□ -0.19
AC009404.1-202ENST00000439955 APPP05067 770 aa13.89□□□□□ -0.19
AC009404.1-202ENST00000439955 HMGB1P09429 215 aaKnown RBP13.89□□□□□ -0.19
AC009404.1-202ENST00000439955 CTGFP29279 349 aa13.89□□□□□ -0.19
AC009404.1-202ENST00000439955 MCM2P49736 904 aa13.89□□□□□ -0.19
AC009404.1-202ENST00000439955 DIXDC1Q155Q3 683 aa13.89□□□□□ -0.19
AC009404.1-202ENST00000439955 HSCBQ8IWL3 235 aa13.89□□□□□ -0.19
AC009404.1-202ENST00000439955 TDRD3Q9H7E2 651 aaKnown RBP13.89□□□□□ -0.19
AC009404.1-202ENST00000439955 AATFQ9NY61 560 aaKnown RBP eCLIP13.89□□□□□ -0.19
AC009404.1-202ENST00000439955 TTF2Q9UNY4 1162 aaKnown RBP13.89□□□□□ -0.19
AC009404.1-202ENST00000439955 NR2E3Q9Y5X4 410 aa13.89□□□□□ -0.19
AC009404.1-202ENST00000439955 FOCADQ5VW36 1801 aa13.89□□□□□ -0.19
AC009404.1-202ENST00000439955 DDX60LQ5H9U9 1706 aaKnown RBP13.88□□□□□ -0.19
AC009404.1-202ENST00000439955 TCP10L2B9ZVM9 353 aa13.88□□□□□ -0.19
AC009404.1-202ENST00000439955 BTBD19C9JJ37 291 aa13.88□□□□□ -0.19
AC009404.1-202ENST00000439955 ZNF213O14771 459 aa13.88□□□□□ -0.19
AC009404.1-202ENST00000439955 WDHD1O75717 1129 aaPredicted RBP13.88□□□□□ -0.19
AC009404.1-202ENST00000439955 CCL5P13501 91 aa13.88□□□□□ -0.19
AC009404.1-202ENST00000439955 GJA8P48165 433 aa13.88□□□□□ -0.19
AC009404.1-202ENST00000439955 TDO2P48775 406 aa13.88□□□□□ -0.19
AC009404.1-202ENST00000439955 MNX1P50219 401 aaPredicted RBP13.88□□□□□ -0.19
AC009404.1-202ENST00000439955 NEK4P51957 841 aa13.88□□□□□ -0.19
AC009404.1-202ENST00000439955 DYNLL1P63167 89 aaKnown RBP13.88□□□□□ -0.19
AC009404.1-202ENST00000439955 MAP3K9P80192 1104 aa13.88□□□□□ -0.19
AC009404.1-202ENST00000439955 UBE2Q1Q7Z7E8 422 aa13.88□□□□□ -0.19
AC009404.1-202ENST00000439955 TEKT1Q969V4 418 aa13.88□□□□□ -0.19
AC009404.1-202ENST00000439955 JAKMIP1Q96N16 626 aaKnown RBP13.88□□□□□ -0.19
AC009404.1-202ENST00000439955 TEPSINQ96N21 525 aa13.88□□□□□ -0.19
AC009404.1-202ENST00000439955 TBC1D2Q9BYX2 928 aa13.88□□□□□ -0.19
AC009404.1-202ENST00000439955 TMEM39BQ9GZU3 492 aa13.88□□□□□ -0.19
AC009404.1-202ENST00000439955 BIN2Q9UBW5 565 aaPredicted RBP13.88□□□□□ -0.19
AC009404.1-202ENST00000439955 ZNF70Q9UC06 446 aaPredicted RBP13.88□□□□□ -0.19
AC009404.1-202ENST00000439955 CPA4Q9UI42 421 aa13.88□□□□□ -0.19
AC009404.1-202ENST00000439955 DAGLAQ9Y4D2 1042 aa13.88□□□□□ -0.19
AC009404.1-202ENST00000439955 CSADQ9Y600 493 aa13.88□□□□□ -0.19
AC009404.1-202ENST00000439955 CYP46A1Q9Y6A2 500 aa13.88□□□□□ -0.19
AC009404.1-202ENST00000439955 NAV1Q8NEY1 1877 aa13.88□□□□□ -0.19
AC009404.1-202ENST00000439955 CDK5RAP2Q96SN8 1893 aa13.88□□□□□ -0.19
AC009404.1-202ENST00000439955 OTOFQ9HC10 1997 aa13.87□□□□□ -0.19
AC009404.1-202ENST00000439955 PRKAB2O43741 272 aa13.87□□□□□ -0.19
AC009404.1-202ENST00000439955 CASTP20810 708 aaKnown RBP13.87□□□□□ -0.19
AC009404.1-202ENST00000439955 GRK4P32298 578 aa13.87□□□□□ -0.19
AC009404.1-202ENST00000439955 BTDP43251 543 aa13.87□□□□□ -0.19
AC009404.1-202ENST00000439955 PSMC4P43686 418 aa13.87□□□□□ -0.19
AC009404.1-202ENST00000439955 ADCK5Q3MIX3 580 aa13.87□□□□□ -0.19
AC009404.1-202ENST00000439955 BLOC1S2Q6QNY1 142 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms