RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 ZBTB21Q9ULJ3 1066 aa29.76■■■□□ 2.35
RAPGEF1-206ENST00000438647 SLC45A1Q9Y2W3 748 aa29.76■■■□□ 2.35
RAPGEF1-206ENST00000438647 ARHGEF6Q15052 776 aa29.75■■■□□ 2.35
RAPGEF1-206ENST00000438647 WDR18Q9BV38 432 aa29.75■■■□□ 2.35
RAPGEF1-206ENST00000438647 STAP2Q9UGK3 403 aa29.75■■■□□ 2.35
RAPGEF1-206ENST00000438647 SLC4A4Q9Y6R1 1079 aa29.75■■■□□ 2.35
RAPGEF1-206ENST00000438647 PRKAB2O43741 272 aa29.74■■■□□ 2.35
RAPGEF1-206ENST00000438647 CERKLQ49MI3 558 aaPredicted RBP29.74■■■□□ 2.35
RAPGEF1-206ENST00000438647 PROCA1Q8NCQ7 364 aaPredicted RBP29.74■■■□□ 2.35
RAPGEF1-206ENST00000438647 CD99L2Q8TCZ2 262 aa29.74■■■□□ 2.35
RAPGEF1-206ENST00000438647 PTPRFP10586 1907 aa29.73■■■□□ 2.35
RAPGEF1-206ENST00000438647 FSD1Q9BTV5 496 aa29.73■■■□□ 2.35
RAPGEF1-206ENST00000438647 LNPKQ9C0E8 428 aa29.73■■■□□ 2.35
RAPGEF1-206ENST00000438647 AGTPBP1Q9UPW5 1226 aa29.73■■■□□ 2.35
RAPGEF1-206ENST00000438647 TRIM17Q9Y577 477 aa29.73■■■□□ 2.35
RAPGEF1-206ENST00000438647 IGHDP01880 384 aa29.72■■■□□ 2.35
RAPGEF1-206ENST00000438647 PDE1AP54750 535 aa29.72■■■□□ 2.35
RAPGEF1-206ENST00000438647 GABPAQ06546 454 aa29.72■■■□□ 2.35
RAPGEF1-206ENST00000438647 B4GALNT3Q6L9W6 998 aa29.72■■■□□ 2.35
RAPGEF1-206ENST00000438647 FBXO46Q6PJ61 603 aaPredicted RBP29.72■■■□□ 2.35
RAPGEF1-206ENST00000438647 GH2P01242 217 aa29.71■■■□□ 2.35
RAPGEF1-206ENST00000438647 PABPC4Q13310 644 aaKnown RBP eCLIP29.71■■■□□ 2.35
RAPGEF1-206ENST00000438647 C17orf99Q6UX52 265 aa29.71■■■□□ 2.35
RAPGEF1-206ENST00000438647 OTOP1Q7RTM1 612 aa29.71■■■□□ 2.35
RAPGEF1-206ENST00000438647 OSBP2Q969R2 916 aa29.71■■■□□ 2.35
RAPGEF1-206ENST00000438647 STRBPQ96SI9 672 aaKnown RBP29.71■■■□□ 2.35
RAPGEF1-206ENST00000438647 EFCC1Q9HA90 598 aa29.71■■■□□ 2.35
RAPGEF1-206ENST00000438647 CABP5Q9NP86 173 aa29.71■■■□□ 2.35
RAPGEF1-206ENST00000438647 SWAP70Q9UH65 585 aa29.71■■■□□ 2.35
RAPGEF1-206ENST00000438647 PNMA3Q9UL41 463 aa29.71■■■□□ 2.35
RAPGEF1-206ENST00000438647 CCDC85CA6NKD9 419 aa29.7■■■□□ 2.35
RAPGEF1-206ENST00000438647 SHMT1P34896 483 aa29.7■■■□□ 2.35
RAPGEF1-206ENST00000438647 HMGCS2P54868 508 aa29.7■■■□□ 2.35
RAPGEF1-206ENST00000438647 BACE1P56817 501 aa29.7■■■□□ 2.35
RAPGEF1-206ENST00000438647 JAG1P78504 1218 aa29.7■■■□□ 2.35
RAPGEF1-206ENST00000438647 KIF22Q14807 665 aa29.7■■■□□ 2.35
RAPGEF1-206ENST00000438647 ABCB5Q2M3G0 1257 aa29.7■■■□□ 2.35
RAPGEF1-206ENST00000438647 SH3D19Q5HYK7 790 aa29.7■■■□□ 2.35
RAPGEF1-206ENST00000438647 C19orf81C9J6K1 198 aa29.69■■■□□ 2.34
RAPGEF1-206ENST00000438647 GNAT2P19087 354 aa29.69■■■□□ 2.34
RAPGEF1-206ENST00000438647 CHD1LQ86WJ1 897 aa29.69■■■□□ 2.34
RAPGEF1-206ENST00000438647 ADGRA2Q96PE1 1338 aa29.69■■■□□ 2.34
RAPGEF1-206ENST00000438647 USP17L10C9JJH3 530 aa29.68■■■□□ 2.34
RAPGEF1-206ENST00000438647 CYP2C8P10632 490 aa29.68■■■□□ 2.34
RAPGEF1-206ENST00000438647 NUCB1Q02818 461 aa29.68■■■□□ 2.34
RAPGEF1-206ENST00000438647 MTMR2Q13614 643 aa29.68■■■□□ 2.34
RAPGEF1-206ENST00000438647 SHROOM1Q2M3G4 852 aaPredicted RBP29.68■■■□□ 2.34
RAPGEF1-206ENST00000438647 GIMAP6Q6P9H5 292 aa29.68■■■□□ 2.34
RAPGEF1-206ENST00000438647 EVI5LQ96CN4 794 aa29.68■■■□□ 2.34
RAPGEF1-206ENST00000438647 TMOD4Q9NZQ9 345 aa29.68■■■□□ 2.34
RAPGEF1-206ENST00000438647 ARPP21Q9UBL0 812 aaPredicted RBP29.68■■■□□ 2.34
RAPGEF1-206ENST00000438647 CPA4Q9UI42 421 aa29.68■■■□□ 2.34
RAPGEF1-206ENST00000438647 USP17L12C9JPN9 530 aa29.67■■■□□ 2.34
RAPGEF1-206ENST00000438647 USP17L21D6R901 530 aa29.67■■■□□ 2.34
RAPGEF1-206ENST00000438647 GPAA1O43292 621 aa29.67■■■□□ 2.34
RAPGEF1-206ENST00000438647 CYP2D6P10635 497 aa29.67■■■□□ 2.34
RAPGEF1-206ENST00000438647 IRX6P78412 446 aaPredicted RBP29.67■■■□□ 2.34
RAPGEF1-206ENST00000438647 LACTBP83111 547 aaPredicted RBP29.67■■■□□ 2.34
RAPGEF1-206ENST00000438647 C12orf60Q5U649 245 aa29.67■■■□□ 2.34
RAPGEF1-206ENST00000438647 SMCR8Q8TEV9 937 aaPredicted RBP29.67■■■□□ 2.34
RAPGEF1-206ENST00000438647 HPS5Q9UPZ3 1129 aa29.67■■■□□ 2.34
RAPGEF1-206ENST00000438647 RAB3GAP1Q15042 981 aa29.66■■■□□ 2.34
RAPGEF1-206ENST00000438647 TREML2Q5T2D2 321 aa29.66■■■□□ 2.34
RAPGEF1-206ENST00000438647 LOC285556D6RIA3 1793 aa29.65■■■□□ 2.34
RAPGEF1-206ENST00000438647 BAZ2AQ9UIF9 1905 aaKnown RBP29.65■■■□□ 2.34
RAPGEF1-206ENST00000438647 GNRH1P01148 92 aa29.64■■■□□ 2.34
RAPGEF1-206ENST00000438647 EVX2Q03828 476 aa29.64■■■□□ 2.34
RAPGEF1-206ENST00000438647 TICAM2Q86XR7 235 aa29.64■■■□□ 2.34
RAPGEF1-206ENST00000438647 GSG1L2A8MUP6 293 aa29.63■■■□□ 2.33
RAPGEF1-206ENST00000438647 M0R2C6 588 aa29.63■■■□□ 2.33
RAPGEF1-206ENST00000438647 MPHOSPH10O00566 681 aaKnown RBP29.63■■■□□ 2.33
RAPGEF1-206ENST00000438647 BCRP11274 1271 aa29.63■■■□□ 2.33
RAPGEF1-206ENST00000438647 OSBPP22059 807 aa29.63■■■□□ 2.33
RAPGEF1-206ENST00000438647 ZMYM1Q5SVZ6 1142 aa29.63■■■□□ 2.33
RAPGEF1-206ENST00000438647 CTR9Q6PD62 1173 aa29.63■■■□□ 2.33
RAPGEF1-206ENST00000438647 DYNLL2Q96FJ2 89 aa29.63■■■□□ 2.33
RAPGEF1-206ENST00000438647 FEZ1Q99689 392 aa29.63■■■□□ 2.33
RAPGEF1-206ENST00000438647 PTPN22Q9Y2R2 807 aa29.63■■■□□ 2.33
RAPGEF1-206ENST00000438647 SBK1Q52WX2 424 aa29.62■■■□□ 2.33
RAPGEF1-206ENST00000438647 USP17L2Q6R6M4 530 aa29.62■■■□□ 2.33
RAPGEF1-206ENST00000438647 SLC44A5Q8NCS7 719 aa29.62■■■□□ 2.33
RAPGEF1-206ENST00000438647 CYP2D7A0A087X1C5 515 aa29.61■■■□□ 2.33
RAPGEF1-206ENST00000438647 APPP05067 770 aa29.61■■■□□ 2.33
RAPGEF1-206ENST00000438647 USP14P54578 494 aa29.61■■■□□ 2.33
RAPGEF1-206ENST00000438647 TMEM179Q6ZVK1 233 aa29.61■■■□□ 2.33
RAPGEF1-206ENST00000438647 C16orf86Q6ZW13 317 aa29.61■■■□□ 2.33
RAPGEF1-206ENST00000438647 CCDC17Q96LX7 622 aa29.61■■■□□ 2.33
RAPGEF1-206ENST00000438647 NACAP1Q9BZK3 213 aa29.61■■■□□ 2.33
RAPGEF1-206ENST00000438647 PATL2C9JE40 543 aaKnown RBP29.6■■■□□ 2.33
RAPGEF1-206ENST00000438647 TDO2P48775 406 aa29.6■■■□□ 2.33
RAPGEF1-206ENST00000438647 CDK8P49336 464 aa29.6■■■□□ 2.33
RAPGEF1-206ENST00000438647 OSBPL3Q9H4L5 887 aa29.6■■■□□ 2.33
RAPGEF1-206ENST00000438647 HOXA7P31268 230 aaPredicted RBP29.59■■■□□ 2.33
RAPGEF1-206ENST00000438647 GCLCP48506 637 aaPredicted RBP29.59■■■□□ 2.33
RAPGEF1-206ENST00000438647 IRX3P78415 501 aaPredicted RBP29.59■■■□□ 2.33
RAPGEF1-206ENST00000438647 CAP1Q01518 475 aa29.59■■■□□ 2.33
RAPGEF1-206ENST00000438647 SEPT2Q15019 361 aa29.59■■■□□ 2.33
RAPGEF1-206ENST00000438647 PLEKHM2Q8IWE5 1019 aa29.59■■■□□ 2.33
RAPGEF1-206ENST00000438647 C12orf42Q96LP6 360 aa29.59■■■□□ 2.33
RAPGEF1-206ENST00000438647 SEC62Q99442 399 aaKnown RBP29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms