RNA–Protein interactions for RNA: ENST00000434795.5

CPNE1-213, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-213ENST00000434795 SERPINB13Q9UIV8 391 aa21.67■■□□□ 1.06
CPNE1-213ENST00000434795 PDE4DIPQ5VU43 2346 aa21.66■■□□□ 1.06
CPNE1-213ENST00000434795 SLFNL1Q499Z3 407 aa21.66■■□□□ 1.06
CPNE1-213ENST00000434795 ANKRD13CQ8N6S4 541 aa21.66■■□□□ 1.06
CPNE1-213ENST00000434795 ASCC2Q9H1I8 757 aaPredicted RBP21.66■■□□□ 1.06
CPNE1-213ENST00000434795 PNMA3Q9UL41 463 aa21.66■■□□□ 1.06
CPNE1-213ENST00000434795 ZBTB21Q9ULJ3 1066 aa21.66■■□□□ 1.06
CPNE1-213ENST00000434795 GABRQQ9UN88 632 aa21.66■■□□□ 1.06
CPNE1-213ENST00000434795 MYPNQ86TC9 1320 aa21.65■■□□□ 1.06
CPNE1-213ENST00000434795 SIPA1L1O43166 1804 aa21.65■■□□□ 1.06
CPNE1-213ENST00000434795 USP17L10C9JJH3 530 aa21.65■■□□□ 1.06
CPNE1-213ENST00000434795 HOXA7P31268 230 aaPredicted RBP21.65■■□□□ 1.06
CPNE1-213ENST00000434795 PRKCZQ05513 592 aa21.65■■□□□ 1.06
CPNE1-213ENST00000434795 PABPC4Q13310 644 aaKnown RBP eCLIP21.65■■□□□ 1.06
CPNE1-213ENST00000434795 MTMR2Q13614 643 aa21.65■■□□□ 1.06
CPNE1-213ENST00000434795 RAET1EQ8TD07 263 aa21.65■■□□□ 1.06
CPNE1-213ENST00000434795 CRNKL1Q9BZJ0 848 aaKnown RBP21.65■■□□□ 1.06
CPNE1-213ENST00000434795 MAST2Q6P0Q8 1798 aa21.65■■□□□ 1.06
CPNE1-213ENST00000434795 MYCP01106 439 aaPredicted RBP21.64■■□□□ 1.05
CPNE1-213ENST00000434795 GH2P01242 217 aa21.64■■□□□ 1.05
CPNE1-213ENST00000434795 GRK4P32298 578 aa21.64■■□□□ 1.05
CPNE1-213ENST00000434795 ADD2P35612 726 aa21.64■■□□□ 1.05
CPNE1-213ENST00000434795 GCLCP48506 637 aaPredicted RBP21.64■■□□□ 1.05
CPNE1-213ENST00000434795 LCORLQ8N3X6 602 aa21.64■■□□□ 1.05
CPNE1-213ENST00000434795 P2RX7Q99572 595 aaKnown RBP21.64■■□□□ 1.05
CPNE1-213ENST00000434795 EMILIN3Q9NT22 766 aa21.64■■□□□ 1.05
CPNE1-213ENST00000434795 PCDHB15Q9Y5E8 787 aa21.64■■□□□ 1.05
CPNE1-213ENST00000434795 ZSWIM8A7E2V4 1837 aa21.64■■□□□ 1.05
CPNE1-213ENST00000434795 BRCA2P51587 3418 aa21.64■■□□□ 1.05
CPNE1-213ENST00000434795 MKI67P46013 3256 aaKnown RBP21.63■■□□□ 1.05
CPNE1-213ENST00000434795 POLR3DP05423 398 aaPredicted RBP21.63■■□□□ 1.05
CPNE1-213ENST00000434795 GABPAQ06546 454 aa21.63■■□□□ 1.05
CPNE1-213ENST00000434795 CERKLQ49MI3 558 aaPredicted RBP21.63■■□□□ 1.05
CPNE1-213ENST00000434795 DCP1AQ9NPI6 582 aaPredicted RBP21.63■■□□□ 1.05
CPNE1-213ENST00000434795 TMOD4Q9NZQ9 345 aa21.63■■□□□ 1.05
CPNE1-213ENST00000434795 PTPRFP10586 1907 aa21.63■■□□□ 1.05
CPNE1-213ENST00000434795 CDK5RAP2Q96SN8 1893 aa21.62■■□□□ 1.05
CPNE1-213ENST00000434795 CHGBP05060 677 aa21.62■■□□□ 1.05
CPNE1-213ENST00000434795 SHMT1P34896 483 aa21.62■■□□□ 1.05
CPNE1-213ENST00000434795 FLT3LGP49771 235 aa21.62■■□□□ 1.05
CPNE1-213ENST00000434795 EVX2Q03828 476 aa21.62■■□□□ 1.05
CPNE1-213ENST00000434795 MTFR1Q15390 333 aa21.62■■□□□ 1.05
CPNE1-213ENST00000434795 FAM110CQ1W6H9 321 aa21.62■■□□□ 1.05
CPNE1-213ENST00000434795 SDR42E1Q8WUS8 393 aa21.62■■□□□ 1.05
CPNE1-213ENST00000434795 ARMT1Q9H993 441 aa21.62■■□□□ 1.05
CPNE1-213ENST00000434795 MCM9Q9NXL9 1143 aa21.62■■□□□ 1.05
CPNE1-213ENST00000434795 PRKAB2O43741 272 aa21.61■■□□□ 1.05
CPNE1-213ENST00000434795 UBE3CQ15386 1083 aa21.61■■□□□ 1.05
CPNE1-213ENST00000434795 ABCB5Q2M3G0 1257 aa21.61■■□□□ 1.05
CPNE1-213ENST00000434795 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.61■■□□□ 1.056e-7■■■■■ 30.8
CPNE1-213ENST00000434795 ECHDC1Q9NTX5 307 aa21.61■■□□□ 1.05
CPNE1-213ENST00000434795 FOCADQ5VW36 1801 aa21.61■■□□□ 1.05
CPNE1-213ENST00000434795 TNPO2O14787 897 aaKnown RBP21.6■■□□□ 1.05
CPNE1-213ENST00000434795 GUCY1A2P33402 732 aa21.6■■□□□ 1.05
CPNE1-213ENST00000434795 USP17L2Q6R6M4 530 aa21.6■■□□□ 1.05
CPNE1-213ENST00000434795 MORF4L1Q9UBU8 362 aa21.6■■□□□ 1.05
CPNE1-213ENST00000434795 ADCY3O60266 1144 aa21.59■■□□□ 1.05
CPNE1-213ENST00000434795 IRF5Q13568 498 aa21.59■■□□□ 1.05
CPNE1-213ENST00000434795 POTEEQ6S8J3 1075 aa21.59■■□□□ 1.05
CPNE1-213ENST00000434795 ATP8A2Q9NTI2 1148 aa21.59■■□□□ 1.05
CPNE1-213ENST00000434795 RBPJLQ9UBG7 517 aa21.59■■□□□ 1.05
CPNE1-213ENST00000434795 GJD2Q9UKL4 321 aa21.59■■□□□ 1.05
CPNE1-213ENST00000434795 MBD4O95243 580 aa21.58■■□□□ 1.05
CPNE1-213ENST00000434795 CYP2D6P10635 497 aa21.58■■□□□ 1.05
CPNE1-213ENST00000434795 IRX3P78415 501 aaPredicted RBP21.58■■□□□ 1.05
CPNE1-213ENST00000434795 RAB3GAP1Q15042 981 aa21.58■■□□□ 1.05
CPNE1-213ENST00000434795 PRPF38BQ5VTL8 546 aaKnown RBP21.58■■□□□ 1.05
CPNE1-213ENST00000434795 SLAIN1Q8ND83 568 aa21.58■■□□□ 1.05
CPNE1-213ENST00000434795 ACER1Q8TDN7 264 aa21.58■■□□□ 1.05
CPNE1-213ENST00000434795 PXYLP1Q8TE99 480 aa21.58■■□□□ 1.05
CPNE1-213ENST00000434795 COA7Q96BR5 231 aa21.58■■□□□ 1.05
CPNE1-213ENST00000434795 CABP5Q9NP86 173 aa21.58■■□□□ 1.05
CPNE1-213ENST00000434795 PEX10O60683 326 aa21.57■■□□□ 1.04
CPNE1-213ENST00000434795 CCL5P13501 91 aa21.57■■□□□ 1.04
CPNE1-213ENST00000434795 RRP1P56182 461 aaKnown RBP21.57■■□□□ 1.04
CPNE1-213ENST00000434795 HERVK_113P62684 666 aa21.57■■□□□ 1.04
CPNE1-213ENST00000434795 Q3C1V9 767 aa21.57■■□□□ 1.04
CPNE1-213ENST00000434795 ZSCAN25Q6NSZ9 544 aa21.57■■□□□ 1.04
CPNE1-213ENST00000434795 C12orf42Q96LP6 360 aa21.57■■□□□ 1.04
CPNE1-213ENST00000434795 KIAA1683Q9H0B3 1180 aa21.57■■□□□ 1.04
CPNE1-213ENST00000434795 PUS7LQ9H0K6 701 aaKnown RBP21.57■■□□□ 1.04
CPNE1-213ENST00000434795 TXNRD2Q9NNW7 524 aa21.57■■□□□ 1.04
CPNE1-213ENST00000434795 BIN2Q9UBW5 565 aaPredicted RBP21.57■■□□□ 1.04
CPNE1-213ENST00000434795 MYH1P12882 1939 aa21.57■■□□□ 1.04
CPNE1-213ENST00000434795 GPRC5AQ8NFJ5 357 aa21.56■■□□□ 1.04
CPNE1-213ENST00000434795 TAOK2Q9UL54 1235 aa21.56■■□□□ 1.04
CPNE1-213ENST00000434795 ATAD5Q96QE3 1844 aa21.56■■□□□ 1.04
CPNE1-213ENST00000434795 SMIM22K7EJ46 135 aa21.55■■□□□ 1.04
CPNE1-213ENST00000434795 GJB1P08034 283 aa21.55■■□□□ 1.04
CPNE1-213ENST00000434795 ELNP15502 786 aa21.55■■□□□ 1.04
CPNE1-213ENST00000434795 UBXN2AP68543 259 aa21.55■■□□□ 1.04
CPNE1-213ENST00000434795 SEPT2Q15019 361 aa21.55■■□□□ 1.04
CPNE1-213ENST00000434795 C12orf60Q5U649 245 aa21.55■■□□□ 1.04
CPNE1-213ENST00000434795 DYNLL2Q96FJ2 89 aa21.55■■□□□ 1.04
CPNE1-213ENST00000434795 RNF208Q9H0X6 261 aa21.55■■□□□ 1.04
CPNE1-213ENST00000434795 LOC285556D6RIA3 1793 aa21.54■■□□□ 1.04
CPNE1-213ENST00000434795 USP17L15C9J2P7 530 aa21.54■■□□□ 1.04
CPNE1-213ENST00000434795 USP17L13C9JLJ4 530 aa21.54■■□□□ 1.04
CPNE1-213ENST00000434795 USP17L12C9JPN9 530 aa21.54■■□□□ 1.04
CPNE1-213ENST00000434795 USP17L11C9JVI0 530 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 186.9 ms