RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 CCL5P13501 91 aa20.82■□□□□ 0.92
CPSF4-203ENST00000430038 PLCD1P51178 756 aa20.82■□□□□ 0.92
CPSF4-203ENST00000430038 TATDN1Q6P1N9 297 aa20.82■□□□□ 0.92
CPSF4-203ENST00000430038 CRACR2BQ8N4Y2 399 aaPredicted RBP20.82■□□□□ 0.92
CPSF4-203ENST00000430038 KIF1BPQ96EK5 621 aa20.82■□□□□ 0.92
CPSF4-203ENST00000430038 P2RX7Q99572 595 aaKnown RBP20.82■□□□□ 0.92
CPSF4-203ENST00000430038 ADCY3O60266 1144 aa20.81■□□□□ 0.92
CPSF4-203ENST00000430038 ASNSP08243 561 aa20.81■□□□□ 0.92
CPSF4-203ENST00000430038 PDE6AP16499 860 aa20.81■□□□□ 0.92
CPSF4-203ENST00000430038 MAP3K12Q12852 859 aa20.81■□□□□ 0.92
CPSF4-203ENST00000430038 HSP90AB4PQ58FF6 505 aa20.81■□□□□ 0.92
CPSF4-203ENST00000430038 TBC1D2Q9BYX2 928 aa20.81■□□□□ 0.92
CPSF4-203ENST00000430038 UNC93B1Q9H1C4 597 aa20.81■□□□□ 0.92
CPSF4-203ENST00000430038 TXNRD2Q9NNW7 524 aa20.81■□□□□ 0.92
CPSF4-203ENST00000430038 EMILIN3Q9NT22 766 aa20.81■□□□□ 0.92
CPSF4-203ENST00000430038 NAV1Q8NEY1 1877 aa20.8■□□□□ 0.92
CPSF4-203ENST00000430038 GOLIM4O00461 696 aa20.8■□□□□ 0.92
CPSF4-203ENST00000430038 TNPO2O14787 897 aaKnown RBP20.8■□□□□ 0.92
CPSF4-203ENST00000430038 GH2P01242 217 aa20.8■□□□□ 0.92
CPSF4-203ENST00000430038 USP5P45974 858 aa20.8■□□□□ 0.92
CPSF4-203ENST00000430038 FAM110CQ1W6H9 321 aa20.8■□□□□ 0.92
CPSF4-203ENST00000430038 SLC9C2Q5TAH2 1124 aa20.8■□□□□ 0.92
CPSF4-203ENST00000430038 CLASRPQ8N2M8 674 aaKnown RBP20.8■□□□□ 0.92
CPSF4-203ENST00000430038 AS3MTQ9HBK9 375 aa20.8■□□□□ 0.92
CPSF4-203ENST00000430038 GJD2Q9UKL4 321 aa20.8■□□□□ 0.92
CPSF4-203ENST00000430038 BAZ2AQ9UIF9 1905 aaKnown RBP20.8■□□□□ 0.92
CPSF4-203ENST00000430038 SMIM22K7EJ46 135 aa20.79■□□□□ 0.92
CPSF4-203ENST00000430038 HOXA7P31268 230 aaPredicted RBP20.79■□□□□ 0.92
CPSF4-203ENST00000430038 UBE2Q1Q7Z7E8 422 aa20.79■□□□□ 0.92
CPSF4-203ENST00000430038 DNAJC2Q99543 621 aaKnown RBP20.79■□□□□ 0.92
CPSF4-203ENST00000430038 ZNF532Q9HCE3 1301 aa20.78■□□□□ 0.92
CPSF4-203ENST00000430038 USP17L10C9JJH3 530 aa20.78■□□□□ 0.92
CPSF4-203ENST00000430038 SMARCA5O60264 1052 aaPredicted RBP20.78■□□□□ 0.92
CPSF4-203ENST00000430038 HLA-DOAP06340 250 aa20.78■□□□□ 0.92
CPSF4-203ENST00000430038 GUCY1A2P33402 732 aa20.78■□□□□ 0.92
CPSF4-203ENST00000430038 SHMT1P34896 483 aa20.78■□□□□ 0.92
CPSF4-203ENST00000430038 Q3C1V9 767 aa20.78■□□□□ 0.92
CPSF4-203ENST00000430038 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.78■□□□□ 0.92
CPSF4-203ENST00000430038 RNF208Q9H0X6 261 aa20.78■□□□□ 0.92
CPSF4-203ENST00000430038 BOLA2Q9H3K6 86 aa20.78■□□□□ 0.92
CPSF4-203ENST00000430038 BIN2Q9UBW5 565 aaPredicted RBP20.78■□□□□ 0.92
CPSF4-203ENST00000430038 PNMA3Q9UL41 463 aa20.78■□□□□ 0.92
CPSF4-203ENST00000430038 MYH7P12883 1935 aa20.77■□□□□ 0.92
CPSF4-203ENST00000430038 MAGEB6P1A0A0J9YX57 407 aa20.77■□□□□ 0.92
CPSF4-203ENST00000430038 RAB11FIP3O75154 756 aa20.77■□□□□ 0.92
CPSF4-203ENST00000430038 GJB1P08034 283 aa20.77■□□□□ 0.92
CPSF4-203ENST00000430038 IFIT2P09913 472 aaKnown RBP20.77■□□□□ 0.92
CPSF4-203ENST00000430038 GJA8P48165 433 aa20.77■□□□□ 0.92
CPSF4-203ENST00000430038 IRF5Q13568 498 aa20.77■□□□□ 0.92
CPSF4-203ENST00000430038 LCORLQ8N3X6 602 aa20.77■□□□□ 0.92
CPSF4-203ENST00000430038 SLAIN1Q8ND83 568 aa20.77■□□□□ 0.92
CPSF4-203ENST00000430038 ACER1Q8TDN7 264 aa20.77■□□□□ 0.92
CPSF4-203ENST00000430038 SDR42E1Q8WUS8 393 aa20.77■□□□□ 0.92
CPSF4-203ENST00000430038 EHD4Q9H223 541 aa20.77■□□□□ 0.92
CPSF4-203ENST00000430038 RBPJLQ9UBG7 517 aa20.77■□□□□ 0.92
CPSF4-203ENST00000430038 MORF4L1Q9UBU8 362 aa20.77■□□□□ 0.92
CPSF4-203ENST00000430038 SERPINB13Q9UIV8 391 aa20.77■□□□□ 0.92
CPSF4-203ENST00000430038 C19orf81C9J6K1 198 aa20.76■□□□□ 0.91
CPSF4-203ENST00000430038 PRKAB2O43741 272 aa20.76■□□□□ 0.91
CPSF4-203ENST00000430038 HMMRO75330 724 aa20.76■□□□□ 0.91
CPSF4-203ENST00000430038 INHAP05111 366 aa20.76■□□□□ 0.91
CPSF4-203ENST00000430038 CYP2D6P10635 497 aa20.76■□□□□ 0.91
CPSF4-203ENST00000430038 GCLCP48506 637 aaPredicted RBP20.76■□□□□ 0.91
CPSF4-203ENST00000430038 GABPAQ06546 454 aa20.76■□□□□ 0.91
CPSF4-203ENST00000430038 TRIM32Q13049 653 aa20.76■□□□□ 0.91
CPSF4-203ENST00000430038 PXYLP1Q8TE99 480 aa20.76■□□□□ 0.91
CPSF4-203ENST00000430038 TRIM34Q9BYJ4 488 aa20.76■□□□□ 0.91
CPSF4-203ENST00000430038 ATP5JP18859 108 aa20.75■□□□□ 0.91
CPSF4-203ENST00000430038 HERVK_113P62684 666 aa20.75■□□□□ 0.91
CPSF4-203ENST00000430038 PDE3AQ14432 1141 aa20.75■□□□□ 0.91
CPSF4-203ENST00000430038 TTF1Q15361 905 aaPredicted RBP20.75■□□□□ 0.91
CPSF4-203ENST00000430038 ZYXQ15942 572 aaKnown RBP20.75■□□□□ 0.91
CPSF4-203ENST00000430038 GINM1Q9NU53 330 aa20.75■□□□□ 0.91
CPSF4-203ENST00000430038 TAOK2Q9UL54 1235 aa20.75■□□□□ 0.91
CPSF4-203ENST00000430038 PABPC4Q13310 644 aaKnown RBP eCLIP20.74■□□□□ 0.91
CPSF4-203ENST00000430038 CERKLQ49MI3 558 aaPredicted RBP20.74■□□□□ 0.91
CPSF4-203ENST00000430038 U2AF1L4Q8WU68 220 aaKnown RBP20.74■□□□□ 0.91
CPSF4-203ENST00000430038 COA7Q96BR5 231 aa20.74■□□□□ 0.91
CPSF4-203ENST00000430038 ARMT1Q9H993 441 aa20.74■□□□□ 0.91
CPSF4-203ENST00000430038 PAG1Q9NWQ8 432 aa20.74■□□□□ 0.91
CPSF4-203ENST00000430038 TMOD4Q9NZQ9 345 aa20.74■□□□□ 0.91
CPSF4-203ENST00000430038 ADD2P35612 726 aa20.73■□□□□ 0.91
CPSF4-203ENST00000430038 UBXN2AP68543 259 aa20.73■□□□□ 0.91
CPSF4-203ENST00000430038 IRX3P78415 501 aaPredicted RBP20.73■□□□□ 0.91
CPSF4-203ENST00000430038 TTC6Q86TZ1 520 aa20.73■□□□□ 0.91
CPSF4-203ENST00000430038 CERS3Q8IU89 383 aa20.73■□□□□ 0.91
CPSF4-203ENST00000430038 SLC44A5Q8NCS7 719 aa20.73■□□□□ 0.91
CPSF4-203ENST00000430038 HAUS7Q99871 368 aa20.73■□□□□ 0.91
CPSF4-203ENST00000430038 DCP1AQ9NPI6 582 aaPredicted RBP20.73■□□□□ 0.91
CPSF4-203ENST00000430038 RLFQ13129 1914 aa20.72■□□□□ 0.91
CPSF4-203ENST00000430038 ALPK3Q96L96 1907 aa20.72■□□□□ 0.91
CPSF4-203ENST00000430038 CNMDO75829 334 aa20.72■□□□□ 0.91
CPSF4-203ENST00000430038 SGPL1O95470 568 aa20.72■□□□□ 0.91
CPSF4-203ENST00000430038 RAB3GAP1Q15042 981 aa20.72■□□□□ 0.91
CPSF4-203ENST00000430038 ABCB5Q2M3G0 1257 aa20.72■□□□□ 0.91
CPSF4-203ENST00000430038 TMED8Q6PL24 325 aaPredicted RBP20.72■□□□□ 0.91
CPSF4-203ENST00000430038 DYNLL2Q96FJ2 89 aa20.72■□□□□ 0.91
CPSF4-203ENST00000430038 PORCNQ9H237 461 aa20.72■□□□□ 0.91
CPSF4-203ENST00000430038 MCM9Q9NXL9 1143 aa20.72■□□□□ 0.91
CPSF4-203ENST00000430038 MYH8P13535 1937 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms