RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 CD44P16070 742 aaKnown RBP16.44■□□□□ 0.22
ERCC3-202ENST00000426778 PTPREP23469 700 aa16.44■□□□□ 0.22
ERCC3-202ENST00000426778 LIFRP42702 1097 aa16.44■□□□□ 0.22
ERCC3-202ENST00000426778 SMIM5Q71RC9 77 aa16.44■□□□□ 0.22
ERCC3-202ENST00000426778 TICAM2Q86XR7 235 aa16.44■□□□□ 0.22
ERCC3-202ENST00000426778 PARP4Q9UKK3 1724 aaKnown RBP16.43■□□□□ 0.22
ERCC3-202ENST00000426778 CDHR2Q9BYE9 1310 aa16.43■□□□□ 0.22
ERCC3-202ENST00000426778 PLEKHA8P1O95397 391 aa16.43■□□□□ 0.22
ERCC3-202ENST00000426778 UQCRFS1P1P0C7P4 283 aa16.43■□□□□ 0.22
ERCC3-202ENST00000426778 FGFR2P21802 821 aa16.43■□□□□ 0.22
ERCC3-202ENST00000426778 FANCBQ8NB91 859 aa16.43■□□□□ 0.22
ERCC3-202ENST00000426778 ACSBG1Q96GR2 724 aa16.43■□□□□ 0.22
ERCC3-202ENST00000426778 ZBTB22O15209 634 aa16.43■□□□□ 0.22
ERCC3-202ENST00000426778 CYP7A1P22680 504 aa16.43■□□□□ 0.22
ERCC3-202ENST00000426778 GYG1P46976 350 aa16.43■□□□□ 0.22
ERCC3-202ENST00000426778 DYNLL1P63167 89 aaKnown RBP16.43■□□□□ 0.22
ERCC3-202ENST00000426778 ZNF174Q15697 407 aa16.43■□□□□ 0.22
ERCC3-202ENST00000426778 UBAC1Q9BSL1 405 aa16.43■□□□□ 0.22
ERCC3-202ENST00000426778 BLZF1Q9H2G9 400 aa16.43■□□□□ 0.22
ERCC3-202ENST00000426778 JAG2Q9Y219 1238 aa16.43■□□□□ 0.22
ERCC3-202ENST00000426778 ABCC12Q96J65 1359 aa16.43■□□□□ 0.22
ERCC3-202ENST00000426778 TADA3O75528 432 aa16.42■□□□□ 0.22
ERCC3-202ENST00000426778 CASQ1P31415 396 aa16.42■□□□□ 0.22
ERCC3-202ENST00000426778 SPECC1LQ69YQ0 1117 aa16.42■□□□□ 0.22
ERCC3-202ENST00000426778 TRERF1Q96PN7 1200 aa16.42■□□□□ 0.22
ERCC3-202ENST00000426778 RAI14Q9P0K7 980 aa16.42■□□□□ 0.22
ERCC3-202ENST00000426778 TNKSO95271 1327 aa16.42■□□□□ 0.22
ERCC3-202ENST00000426778 ARHGAP6O43182 974 aa16.42■□□□□ 0.22
ERCC3-202ENST00000426778 ACTN4O43707 911 aaKnown RBP16.42■□□□□ 0.22
ERCC3-202ENST00000426778 CDC25AP30304 524 aa16.42■□□□□ 0.22
ERCC3-202ENST00000426778 PLA2G4AP47712 749 aa16.42■□□□□ 0.22
ERCC3-202ENST00000426778 GABPB1Q06547 395 aaPredicted RBP16.42■□□□□ 0.22
ERCC3-202ENST00000426778 SLAIN2Q9P270 581 aa16.42■□□□□ 0.22
ERCC3-202ENST00000426778 MAPK8IP1Q9UQF2 711 aa16.42■□□□□ 0.22
ERCC3-202ENST00000426778 V9GY48 417 aaPredicted RBP16.42■□□□□ 0.22
ERCC3-202ENST00000426778 PHLPP2Q6ZVD8 1323 aa16.42■□□□□ 0.22
ERCC3-202ENST00000426778 ADAMTS3O15072 1205 aa16.42■□□□□ 0.22
ERCC3-202ENST00000426778 NMT2O60551 498 aa16.42■□□□□ 0.22
ERCC3-202ENST00000426778 VEGFAP15692 232 aaPredicted RBP16.42■□□□□ 0.22
ERCC3-202ENST00000426778 CCT6AP40227 531 aaKnown RBP16.42■□□□□ 0.22
ERCC3-202ENST00000426778 SART3Q15020 963 aaKnown RBP16.42■□□□□ 0.22
ERCC3-202ENST00000426778 ATRNO75882 1429 aa16.41■□□□□ 0.22
ERCC3-202ENST00000426778 FAM237AA0A1B0GTK4 181 aa16.41■□□□□ 0.22
ERCC3-202ENST00000426778 ABL1P00519 1130 aa16.41■□□□□ 0.22
ERCC3-202ENST00000426778 GYS2P54840 703 aa16.41■□□□□ 0.22
ERCC3-202ENST00000426778 PPARAQ07869 468 aa16.41■□□□□ 0.22
ERCC3-202ENST00000426778 MORC3Q14149 939 aa16.41■□□□□ 0.22
ERCC3-202ENST00000426778 TMCO3Q6UWJ1 677 aa16.41■□□□□ 0.22
ERCC3-202ENST00000426778 CCDC12Q8WUD4 166 aaPredicted RBP16.41■□□□□ 0.22
ERCC3-202ENST00000426778 KRT23Q9C075 422 aa16.41■□□□□ 0.22
ERCC3-202ENST00000426778 SHANK3Q9BYB0 1731 aa16.41■□□□□ 0.22
ERCC3-202ENST00000426778 SASH3O75995 380 aa16.41■□□□□ 0.22
ERCC3-202ENST00000426778 ZNF18P17022 549 aa16.41■□□□□ 0.22
ERCC3-202ENST00000426778 BMS1Q14692 1282 aaKnown RBP16.41■□□□□ 0.22
ERCC3-202ENST00000426778 SYMPKQ92797 1274 aaKnown RBP16.41■□□□□ 0.22
ERCC3-202ENST00000426778 NACAP1Q9BZK3 213 aa16.41■□□□□ 0.22
ERCC3-202ENST00000426778 PUF60Q9UHX1 559 aaKnown RBP16.41■□□□□ 0.22
ERCC3-202ENST00000426778 ZSCAN12O43309 604 aa16.4■□□□□ 0.22
ERCC3-202ENST00000426778 DEXIO95424 95 aa16.4■□□□□ 0.22
ERCC3-202ENST00000426778 TBX2Q13207 712 aaPredicted RBP16.4■□□□□ 0.22
ERCC3-202ENST00000426778 RILPL1Q5EBL4 403 aa16.4■□□□□ 0.22
ERCC3-202ENST00000426778 ZNF512BQ96KM6 892 aaPredicted RBP16.4■□□□□ 0.22
ERCC3-202ENST00000426778 NOL10Q9BSC4 688 aaKnown RBP16.4■□□□□ 0.22
ERCC3-202ENST00000426778 MTMR7Q9Y216 660 aa16.4■□□□□ 0.22
ERCC3-202ENST00000426778 SLIT2O94813 1529 aa16.4■□□□□ 0.22
ERCC3-202ENST00000426778 CHD4Q14839 1912 aa16.4■□□□□ 0.22
ERCC3-202ENST00000426778 MYH2Q9UKX2 1941 aa16.4■□□□□ 0.22
ERCC3-202ENST00000426778 RBL2Q08999 1139 aa16.4■□□□□ 0.22
ERCC3-202ENST00000426778 CNNM2Q9H8M5 875 aa16.4■□□□□ 0.22
ERCC3-202ENST00000426778 KCNQ4P56696 695 aa16.39■□□□□ 0.21
ERCC3-202ENST00000426778 AKAP17AQ02040 695 aaKnown RBP16.39■□□□□ 0.21
ERCC3-202ENST00000426778 PPP2R3AQ06190 1150 aa16.39■□□□□ 0.21
ERCC3-202ENST00000426778 DPYDQ12882 1025 aa16.39■□□□□ 0.21
ERCC3-202ENST00000426778 FAM53CQ9NYF3 392 aa16.39■□□□□ 0.21
ERCC3-202ENST00000426778 KCNJ6P48051 423 aa16.39■□□□□ 0.21
ERCC3-202ENST00000426778 RAD9BQ6WBX8 426 aa16.39■□□□□ 0.21
ERCC3-202ENST00000426778 WASF1Q92558 559 aa16.39■□□□□ 0.21
ERCC3-202ENST00000426778 EEF2KMTQ96G04 330 aa16.39■□□□□ 0.21
ERCC3-202ENST00000426778 SRPRBQ9Y5M8 271 aaKnown RBP16.39■□□□□ 0.21
ERCC3-202ENST00000426778 PAPPAQ13219 1627 aa16.39■□□□□ 0.21
ERCC3-202ENST00000426778 MROH5Q6ZUA9 1318 aa16.39■□□□□ 0.21
ERCC3-202ENST00000426778 MYH3P11055 1940 aa16.39■□□□□ 0.21
ERCC3-202ENST00000426778 SARSP49591 514 aaKnown RBP16.39■□□□□ 0.21
ERCC3-202ENST00000426778 CHRNDQ07001 517 aa16.39■□□□□ 0.21
ERCC3-202ENST00000426778 ALX1Q15699 326 aa16.39■□□□□ 0.21
ERCC3-202ENST00000426778 CCDC24Q8N4L8 307 aa16.39■□□□□ 0.21
ERCC3-202ENST00000426778 STAG1Q8WVM7 1258 aa16.39■□□□□ 0.21
ERCC3-202ENST00000426778 FOXP1Q9H334 677 aaPredicted RBP16.39■□□□□ 0.21
ERCC3-202ENST00000426778 HOOK1Q9UJC3 728 aaKnown RBP16.39■□□□□ 0.21
ERCC3-202ENST00000426778 SOS2Q07890 1332 aaPredicted RBP16.38■□□□□ 0.21
ERCC3-202ENST00000426778 ENAHQ8N8S7 591 aaPredicted RBP16.38■□□□□ 0.21
ERCC3-202ENST00000426778 IGSF22Q8N9C0 903 aa16.38■□□□□ 0.21
ERCC3-202ENST00000426778 STK36Q9NRP7 1315 aa16.38■□□□□ 0.21
ERCC3-202ENST00000426778 PKN1Q16512 942 aa16.38■□□□□ 0.21
ERCC3-202ENST00000426778 FAM47AQ5JRC9 791 aa16.38■□□□□ 0.21
ERCC3-202ENST00000426778 MLKLQ8NB16 471 aa16.38■□□□□ 0.21
ERCC3-202ENST00000426778 ENOX1Q8TC92 643 aaKnown RBP16.38■□□□□ 0.21
ERCC3-202ENST00000426778 NUP98P52948 1817 aa16.37■□□□□ 0.21
ERCC3-202ENST00000426778 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.37■□□□□ 0.21
ERCC3-202ENST00000426778 BAZ2AQ9UIF9 1905 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms