RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 MCAMP43121 646 aa15.33■□□□□ 0.04
LRCH3-203ENST00000425562 FXR1P51114 621 aaKnown RBP eCLIP15.33■□□□□ 0.04
LRCH3-203ENST00000425562 EVA1CP58658 441 aa15.33■□□□□ 0.04
LRCH3-203ENST00000425562 IFIT5Q13325 482 aaKnown RBP15.33■□□□□ 0.04
LRCH3-203ENST00000425562 LDHAL6AQ6ZMR3 332 aa15.33■□□□□ 0.04
LRCH3-203ENST00000425562 AEBP2Q6ZN18 517 aaPredicted RBP15.33■□□□□ 0.04
LRCH3-203ENST00000425562 MAP3K14Q99558 947 aa15.33■□□□□ 0.04
LRCH3-203ENST00000425562 EHD4Q9H223 541 aa15.33■□□□□ 0.04
LRCH3-203ENST00000425562 VPS16Q9H269 839 aa15.33■□□□□ 0.04
LRCH3-203ENST00000425562 CDC23Q9UJX2 597 aa15.33■□□□□ 0.04
LRCH3-203ENST00000425562 ALS2Q96Q42 1657 aa15.33■□□□□ 0.04
LRCH3-203ENST00000425562 SPATA31A3Q5VYP0 1347 aa15.33■□□□□ 0.04
LRCH3-203ENST00000425562 PCDH11XQ9BZA7 1347 aa15.33■□□□□ 0.04
LRCH3-203ENST00000425562 PCDH11YQ9BZA8 1340 aa15.33■□□□□ 0.04
LRCH3-203ENST00000425562 ATP8B1O43520 1251 aa15.33■□□□□ 0.04
LRCH3-203ENST00000425562 ABCC6O95255 1503 aa15.33■□□□□ 0.04
LRCH3-203ENST00000425562 GOLGA8AA7E2F4 631 aa15.32■□□□□ 0.04
LRCH3-203ENST00000425562 LRRC31Q6UY01 552 aa15.32■□□□□ 0.04
LRCH3-203ENST00000425562 CNNM1Q9NRU3 951 aa15.32■□□□□ 0.04
LRCH3-203ENST00000425562 HOOK1Q9UJC3 728 aaKnown RBP15.32■□□□□ 0.04
LRCH3-203ENST00000425562 L1RE1Q9UN81 338 aa15.32■□□□□ 0.04
LRCH3-203ENST00000425562 LOC102724159A0A0B4J2E5 919 aa15.32■□□□□ 0.04
LRCH3-203ENST00000425562 CTAGE9A4FU28 777 aa15.32■□□□□ 0.04
LRCH3-203ENST00000425562 CD44P16070 742 aaKnown RBP15.32■□□□□ 0.04
LRCH3-203ENST00000425562 TCIRG1Q13488 830 aa15.32■□□□□ 0.04
LRCH3-203ENST00000425562 BRD3Q15059 726 aa15.32■□□□□ 0.04
LRCH3-203ENST00000425562 PWP2Q15269 919 aaKnown RBP15.32■□□□□ 0.04
LRCH3-203ENST00000425562 TTC31Q49AM3 519 aaPredicted RBP15.32■□□□□ 0.04
LRCH3-203ENST00000425562 KRI1Q8N9T8 703 aaKnown RBP15.32■□□□□ 0.04
LRCH3-203ENST00000425562 CTDSPL2Q05D32 466 aa15.31■□□□□ 0.04
LRCH3-203ENST00000425562 OXER1Q8TDS5 423 aa15.31■□□□□ 0.04
LRCH3-203ENST00000425562 EPSTI1Q96J88 318 aa15.31■□□□□ 0.04
LRCH3-203ENST00000425562 RFX7Q2KHR2 1363 aa15.31■□□□□ 0.04
LRCH3-203ENST00000425562 CTAGE15A4D2H0 777 aa15.31■□□□□ 0.04
LRCH3-203ENST00000425562 CTAGE8P0CG41 777 aa15.31■□□□□ 0.04
LRCH3-203ENST00000425562 IBSPP21815 317 aaPredicted RBP15.31■□□□□ 0.04
LRCH3-203ENST00000425562 ITGA6P23229 1130 aa15.31■□□□□ 0.04
LRCH3-203ENST00000425562 APOA5Q6Q788 366 aa15.31■□□□□ 0.04
LRCH3-203ENST00000425562 CTAGE6Q86UF2 777 aa15.31■□□□□ 0.04
LRCH3-203ENST00000425562 FCHSD1Q86WN1 690 aa15.31■□□□□ 0.04
LRCH3-203ENST00000425562 CTAGE4Q8IX94 777 aa15.31■□□□□ 0.04
LRCH3-203ENST00000425562 NUP133Q8WUM0 1156 aa15.31■□□□□ 0.04
LRCH3-203ENST00000425562 NBPF3Q9H094 633 aa15.31■□□□□ 0.04
LRCH3-203ENST00000425562 TMOD3Q9NYL9 352 aa15.31■□□□□ 0.04
LRCH3-203ENST00000425562 TNS3Q68CZ2 1445 aa15.31■□□□□ 0.04
LRCH3-203ENST00000425562 COL18A1P39060 1754 aa15.31■□□□□ 0.04
LRCH3-203ENST00000425562 GOLGA6L9A6NEM1 432 aa15.3■□□□□ 0.04
LRCH3-203ENST00000425562 ERLIN1O75477 346 aa15.3■□□□□ 0.04
LRCH3-203ENST00000425562 IL2RBP14784 551 aa15.3■□□□□ 0.04
LRCH3-203ENST00000425562 DIS3L2Q8IYB7 885 aaKnown RBP15.3■□□□□ 0.04
LRCH3-203ENST00000425562 MICALL1Q8N3F8 863 aa15.3■□□□□ 0.04
LRCH3-203ENST00000425562 BLZF1Q9H2G9 400 aa15.3■□□□□ 0.04
LRCH3-203ENST00000425562 GPR108Q9NPR9 543 aa15.3■□□□□ 0.04
LRCH3-203ENST00000425562 ANGEL1Q9UNK9 670 aaKnown RBP15.3■□□□□ 0.04
LRCH3-203ENST00000425562 ZBTB43O43298 467 aa15.3■□□□□ 0.04
LRCH3-203ENST00000425562 RNF40O75150 1001 aa15.3■□□□□ 0.04
LRCH3-203ENST00000425562 EIF3JO75822 258 aaKnown RBP15.3■□□□□ 0.04
LRCH3-203ENST00000425562 TOB1P50616 345 aaPredicted RBP15.3■□□□□ 0.04
LRCH3-203ENST00000425562 NUTM2AQ8IVF1 878 aaPredicted RBP15.3■□□□□ 0.04
LRCH3-203ENST00000425562 PIH1D3Q9NQM4 214 aaKnown RBP15.3■□□□□ 0.04
LRCH3-203ENST00000425562 TBC1D2BQ9UPU7 963 aa15.3■□□□□ 0.04
LRCH3-203ENST00000425562 UBN2Q6ZU65 1347 aa15.3■□□□□ 0.04
LRCH3-203ENST00000425562 WDR17Q8IZU2 1322 aa15.3■□□□□ 0.04
LRCH3-203ENST00000425562 ZNF18P17022 549 aa15.3■□□□□ 0.04
LRCH3-203ENST00000425562 LIG3P49916 1009 aa15.3■□□□□ 0.04
LRCH3-203ENST00000425562 TMEM67Q5HYA8 995 aa15.3■□□□□ 0.04
LRCH3-203ENST00000425562 KIF6Q6ZMV9 814 aa15.3■□□□□ 0.04
LRCH3-203ENST00000425562 GOLGA6L1Q8N7Z2 621 aa15.3■□□□□ 0.04
LRCH3-203ENST00000425562 APPBP2Q92624 585 aa15.3■□□□□ 0.04
LRCH3-203ENST00000425562 NUP88Q99567 741 aaPredicted RBP15.3■□□□□ 0.04
LRCH3-203ENST00000425562 CABP5Q9NP86 173 aa15.3■□□□□ 0.04
LRCH3-203ENST00000425562 JRKLQ9Y4A0 524 aa15.3■□□□□ 0.04
LRCH3-203ENST00000425562 PHKA1P46020 1223 aa15.29■□□□□ 0.04
LRCH3-203ENST00000425562 NR1I3Q14994 352 aa15.29■□□□□ 0.04
LRCH3-203ENST00000425562 CADPS2Q86UW7 1296 aa15.29■□□□□ 0.04
LRCH3-203ENST00000425562 ISCA1Q9BUE6 129 aa15.29■□□□□ 0.04
LRCH3-203ENST00000425562 CSRNP2Q9H175 543 aa15.29■□□□□ 0.04
LRCH3-203ENST00000425562 WWC3Q9ULE0 1092 aa15.29■□□□□ 0.04
LRCH3-203ENST00000425562 ZNF142P52746 1687 aaPredicted RBP15.29■□□□□ 0.04
LRCH3-203ENST00000425562 MDM2Q00987 491 aaPredicted RBP15.29■□□□□ 0.04
LRCH3-203ENST00000425562 BRINP3Q76B58 766 aa15.29■□□□□ 0.04
LRCH3-203ENST00000425562 TAB2Q9NYJ8 693 aa15.29■□□□□ 0.04
LRCH3-203ENST00000425562 MYH15Q9Y2K3 1946 aa15.29■□□□□ 0.04
LRCH3-203ENST00000425562 A0A087X0B3 334 aa15.28■□□□□ 0.04
LRCH3-203ENST00000425562 CIAO1O76071 339 aa15.28■□□□□ 0.04
LRCH3-203ENST00000425562 DHX8Q14562 1220 aaKnown RBP15.28■□□□□ 0.04
LRCH3-203ENST00000425562 ICE2Q659A1 982 aa15.28■□□□□ 0.04
LRCH3-203ENST00000425562 CPLX2Q6PUV4 134 aaKnown RBP15.28■□□□□ 0.04
LRCH3-203ENST00000425562 CEP112Q8N8E3 955 aa15.28■□□□□ 0.04
LRCH3-203ENST00000425562 CHP1Q99653 195 aa15.28■□□□□ 0.04
LRCH3-203ENST00000425562 GLI3P10071 1580 aa15.28■□□□□ 0.04
LRCH3-203ENST00000425562 ERVV-2B6SEH9 535 aa15.28■□□□□ 0.04
LRCH3-203ENST00000425562 PPP6R2O75170 966 aa15.28■□□□□ 0.04
LRCH3-203ENST00000425562 KCTD19Q17RG1 926 aaPredicted RBP15.28■□□□□ 0.04
LRCH3-203ENST00000425562 PIGBQ92521 554 aa15.28■□□□□ 0.04
LRCH3-203ENST00000425562 TJP1Q07157 1748 aa15.28■□□□□ 0.04
LRCH3-203ENST00000425562 NWD2Q9ULI1 1742 aa15.28■□□□□ 0.04
LRCH3-203ENST00000425562 IFIT3O14879 490 aaKnown RBP15.27■□□□□ 0.04
LRCH3-203ENST00000425562 GYPCP04921 128 aa15.27■□□□□ 0.04
LRCH3-203ENST00000425562 ERVK-24P63145 666 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms