RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 LCORLQ8N3X6 602 aa8.41□□□□□ -1.06
LSM8-204ENST00000424702 CUL5Q93034 780 aa8.41□□□□□ -1.06
LSM8-204ENST00000424702 LZTS2Q9BRK4 669 aa8.41□□□□□ -1.06
LSM8-204ENST00000424702 SPDYE2BA6NHP3 402 aa8.41□□□□□ -1.06
LSM8-204ENST00000424702 SPDYE6P0CI01 402 aa8.41□□□□□ -1.06
LSM8-204ENST00000424702 ZSCAN22P10073 491 aaPredicted RBP8.41□□□□□ -1.06
LSM8-204ENST00000424702 YY1P25490 414 aa8.41□□□□□ -1.06
LSM8-204ENST00000424702 KLRK1P26718 216 aa8.41□□□□□ -1.06
LSM8-204ENST00000424702 DYNLL1P63167 89 aaKnown RBP8.41□□□□□ -1.06
LSM8-204ENST00000424702 ME3Q16798 604 aa8.41□□□□□ -1.06
LSM8-204ENST00000424702 TSGA10IPQ3SY00 556 aa8.41□□□□□ -1.06
LSM8-204ENST00000424702 FERMT3Q86UX7 667 aa8.41□□□□□ -1.06
LSM8-204ENST00000424702 RBM28Q9NW13 759 aaKnown RBP8.41□□□□□ -1.06
LSM8-204ENST00000424702 QSER1Q2KHR3 1735 aa8.41□□□□□ -1.06
LSM8-204ENST00000424702 GOLGA6L3A6NEY3 463 aa8.41□□□□□ -1.06
LSM8-204ENST00000424702 CTDSPL2Q05D32 466 aa8.41□□□□□ -1.06
LSM8-204ENST00000424702 SMC1BQ8NDV3 1235 aa8.41□□□□□ -1.06
LSM8-204ENST00000424702 SDR42E1Q8WUS8 393 aa8.41□□□□□ -1.06
LSM8-204ENST00000424702 TPCN1Q9ULQ1 816 aa8.41□□□□□ -1.06
LSM8-204ENST00000424702 ANGEL1Q9UNK9 670 aaKnown RBP8.41□□□□□ -1.06
LSM8-204ENST00000424702 ZBTB12Q9Y330 459 aaPredicted RBP8.41□□□□□ -1.06
LSM8-204ENST00000424702 MYH3P11055 1940 aa8.4□□□□□ -1.06
LSM8-204ENST00000424702 DDNO94850 711 aaPredicted RBP8.4□□□□□ -1.06
LSM8-204ENST00000424702 SLC4A8Q2Y0W8 1093 aa8.4□□□□□ -1.06
LSM8-204ENST00000424702 SH3RF3Q8TEJ3 882 aaPredicted RBP8.4□□□□□ -1.06
LSM8-204ENST00000424702 ZNF396Q96N95 335 aaPredicted RBP8.4□□□□□ -1.06
LSM8-204ENST00000424702 SGIP1Q9BQI5 828 aa8.4□□□□□ -1.06
LSM8-204ENST00000424702 KANSL2Q9H9L4 492 aa8.4□□□□□ -1.06
LSM8-204ENST00000424702 ABT1Q9ULW3 272 aaKnown RBP8.4□□□□□ -1.06
LSM8-204ENST00000424702 PLCB2Q00722 1185 aa8.4□□□□□ -1.06
LSM8-204ENST00000424702 COL24A1Q17RW2 1714 aa8.4□□□□□ -1.06
LSM8-204ENST00000424702 ANGEL2Q5VTE6 544 aaKnown RBP8.4□□□□□ -1.06
LSM8-204ENST00000424702 TMEM179Q6ZVK1 233 aa8.4□□□□□ -1.06
LSM8-204ENST00000424702 RAB11FIP4Q86YS3 637 aa8.4□□□□□ -1.06
LSM8-204ENST00000424702 C7orf43Q8WVR3 580 aa8.4□□□□□ -1.06
LSM8-204ENST00000424702 SLC10A4Q96EP9 437 aa8.4□□□□□ -1.06
LSM8-204ENST00000424702 C8orf76Q96K31 380 aa8.4□□□□□ -1.06
LSM8-204ENST00000424702 MTA3Q9BTC8 594 aa8.4□□□□□ -1.06
LSM8-204ENST00000424702 OSBPL5Q9H0X9 879 aaPredicted RBP8.4□□□□□ -1.06
LSM8-204ENST00000424702 ORC3Q9UBD5 711 aaPredicted RBP8.4□□□□□ -1.06
LSM8-204ENST00000424702 IRX3P78415 501 aaPredicted RBP8.4□□□□□ -1.07
LSM8-204ENST00000424702 ICA1Q05084 483 aa8.4□□□□□ -1.07
LSM8-204ENST00000424702 SPDYE2Q495Y8 402 aa8.4□□□□□ -1.07
LSM8-204ENST00000424702 SBK1Q52WX2 424 aa8.4□□□□□ -1.07
LSM8-204ENST00000424702 TXNRD3Q86VQ6 643 aa8.4□□□□□ -1.07
LSM8-204ENST00000424702 CHURC1Q8WUH1 139 aa8.4□□□□□ -1.07
LSM8-204ENST00000424702 TTC14Q96N46 770 aa8.4□□□□□ -1.07
LSM8-204ENST00000424702 LLPHQ9BRT6 129 aaKnown RBP8.4□□□□□ -1.07
LSM8-204ENST00000424702 PITPNM2Q9BZ72 1349 aa8.39□□□□□ -1.07
LSM8-204ENST00000424702 SYT1P21579 422 aa8.39□□□□□ -1.07
LSM8-204ENST00000424702 ECE1P42892 770 aa8.39□□□□□ -1.07
LSM8-204ENST00000424702 RASA3Q14644 834 aa8.39□□□□□ -1.07
LSM8-204ENST00000424702 RTN1Q16799 776 aa8.39□□□□□ -1.07
LSM8-204ENST00000424702 CDC42EP5Q6NZY7 148 aa8.39□□□□□ -1.07
LSM8-204ENST00000424702 BICD2Q8TD16 824 aa8.39□□□□□ -1.07
LSM8-204ENST00000424702 GLT8D2Q9H1C3 349 aa8.39□□□□□ -1.07
LSM8-204ENST00000424702 PNMA3Q9UL41 463 aa8.39□□□□□ -1.07
LSM8-204ENST00000424702 GAKO14976 1311 aa8.39□□□□□ -1.07
LSM8-204ENST00000424702 ZMYM6O95789 1325 aa8.39□□□□□ -1.07
LSM8-204ENST00000424702 FZD9O00144 591 aa8.39□□□□□ -1.07
LSM8-204ENST00000424702 PRKAB2O43741 272 aa8.39□□□□□ -1.07
LSM8-204ENST00000424702 TOP1P11387 765 aaKnown RBP8.39□□□□□ -1.07
LSM8-204ENST00000424702 CCDC144CPQ8IYA2 1237 aa8.39□□□□□ -1.07
LSM8-204ENST00000424702 CCDC148Q8NFR7 591 aa8.39□□□□□ -1.07
LSM8-204ENST00000424702 PTPDC1A2A3K4 754 aa8.39□□□□□ -1.07
LSM8-204ENST00000424702 PARP1P09874 1014 aaKnown RBP8.39□□□□□ -1.07
LSM8-204ENST00000424702 OSBPP22059 807 aa8.39□□□□□ -1.07
LSM8-204ENST00000424702 TFAP4Q01664 338 aa8.39□□□□□ -1.07
LSM8-204ENST00000424702 SSRP1Q08945 709 aaKnown RBP8.39□□□□□ -1.07
LSM8-204ENST00000424702 CHADLQ6NUI6 762 aa8.39□□□□□ -1.07
LSM8-204ENST00000424702 MTMR14Q8NCE2 650 aa8.39□□□□□ -1.07
LSM8-204ENST00000424702 KCNB2Q92953 911 aa8.39□□□□□ -1.07
LSM8-204ENST00000424702 GTF3C6Q969F1 213 aa8.39□□□□□ -1.07
LSM8-204ENST00000424702 ZNF274Q96GC6 653 aaPredicted RBP8.39□□□□□ -1.07
LSM8-204ENST00000424702 CFAP45Q9UL16 551 aa8.39□□□□□ -1.07
LSM8-204ENST00000424702 NOL7Q9UMY1 257 aaKnown RBP8.39□□□□□ -1.07
LSM8-204ENST00000424702 F13A1P00488 732 aa8.38□□□□□ -1.07
LSM8-204ENST00000424702 FKBP1BP68106 108 aa8.38□□□□□ -1.07
LSM8-204ENST00000424702 DCP1AQ9NPI6 582 aaPredicted RBP8.38□□□□□ -1.07
LSM8-204ENST00000424702 ZBED4O75132 1171 aa8.38□□□□□ -1.07
LSM8-204ENST00000424702 PRKG1Q13976 671 aa8.38□□□□□ -1.07
LSM8-204ENST00000424702 ZKSCAN3Q9BRR0 538 aa8.38□□□□□ -1.07
LSM8-204ENST00000424702 LAMB2P55268 1798 aa8.38□□□□□ -1.07
LSM8-204ENST00000424702 PFKFB2O60825 505 aa8.38□□□□□ -1.07
LSM8-204ENST00000424702 GRM1Q13255 1194 aa8.38□□□□□ -1.07
LSM8-204ENST00000424702 KIF22Q14807 665 aa8.38□□□□□ -1.07
LSM8-204ENST00000424702 CAVIN1Q6NZI2 390 aaKnown RBP8.38□□□□□ -1.07
LSM8-204ENST00000424702 SAMD7Q7Z3H4 446 aa8.38□□□□□ -1.07
LSM8-204ENST00000424702 RRAGCQ9HB90 399 aa8.38□□□□□ -1.07
LSM8-204ENST00000424702 USP17L5A8MUK1 530 aa8.38□□□□□ -1.07
LSM8-204ENST00000424702 PPFIA3O75145 1194 aa8.38□□□□□ -1.07
LSM8-204ENST00000424702 ZNF280AP59817 542 aaPredicted RBP8.38□□□□□ -1.07
LSM8-204ENST00000424702 GUCY1B3Q02153 619 aa8.38□□□□□ -1.07
LSM8-204ENST00000424702 CCDC82Q8N4S0 544 aa8.38□□□□□ -1.07
LSM8-204ENST00000424702 RBM46Q8TBY0 533 aaKnown RBP8.38□□□□□ -1.07
LSM8-204ENST00000424702 SPATA32Q96LK8 384 aa8.38□□□□□ -1.07
LSM8-204ENST00000424702 IDI2Q9BXS1 227 aa8.38□□□□□ -1.07
LSM8-204ENST00000424702 SCAND2PQ9GZW5 306 aaPredicted RBP8.38□□□□□ -1.07
LSM8-204ENST00000424702 EHD4Q9H223 541 aa8.38□□□□□ -1.07
LSM8-204ENST00000424702 ALDH8A1Q9H2A2 487 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms