RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 DDRGK1Q96HY6 314 aa31.76■■■□□ 2.67
CDK9-202ENST00000421939 SLC4A4Q9Y6R1 1079 aa31.76■■■□□ 2.67
CDK9-202ENST00000421939 SPP2Q13103 211 aa31.75■■■□□ 2.67
CDK9-202ENST00000421939 SHROOM1Q2M3G4 852 aaPredicted RBP31.75■■■□□ 2.67
CDK9-202ENST00000421939 GPAT2Q6NUI2 795 aa31.75■■■□□ 2.67
CDK9-202ENST00000421939 GADL1Q6ZQY3 521 aa31.75■■■□□ 2.67
CDK9-202ENST00000421939 AS3MTQ9HBK9 375 aa31.75■■■□□ 2.67
CDK9-202ENST00000421939 BAZ2AQ9UIF9 1905 aaKnown RBP31.75■■■□□ 2.67
CDK9-202ENST00000421939 CYP2D6P10635 497 aa31.74■■■□□ 2.67
CDK9-202ENST00000421939 EVX2Q03828 476 aa31.74■■■□□ 2.67
CDK9-202ENST00000421939 GABPAQ06546 454 aa31.74■■■□□ 2.67
CDK9-202ENST00000421939 STRBPQ96SI9 672 aaKnown RBP31.74■■■□□ 2.67
CDK9-202ENST00000421939 TLR2O60603 784 aa31.73■■■□□ 2.67
CDK9-202ENST00000421939 SHMT1P34896 483 aa31.73■■■□□ 2.67
CDK9-202ENST00000421939 ABHD8Q96I13 439 aa31.73■■■□□ 2.67
CDK9-202ENST00000421939 WDR18Q9BV38 432 aa31.73■■■□□ 2.67
CDK9-202ENST00000421939 LOC285556D6RIA3 1793 aa31.72■■■□□ 2.67
CDK9-202ENST00000421939 SP3Q02447 781 aa31.72■■■□□ 2.67
CDK9-202ENST00000421939 AMOTL1Q8IY63 956 aa31.72■■■□□ 2.67
CDK9-202ENST00000421939 ERO1AQ96HE7 468 aa31.72■■■□□ 2.67
CDK9-202ENST00000421939 PARK7Q99497 189 aaKnown RBP31.72■■■□□ 2.67
CDK9-202ENST00000421939 M0R2C6 588 aa31.71■■■□□ 2.67
CDK9-202ENST00000421939 GPAA1O43292 621 aa31.71■■■□□ 2.67
CDK9-202ENST00000421939 GH2P01242 217 aa31.71■■■□□ 2.67
CDK9-202ENST00000421939 CERKLQ49MI3 558 aaPredicted RBP31.71■■■□□ 2.67
CDK9-202ENST00000421939 EVI5LQ96CN4 794 aa31.71■■■□□ 2.67
CDK9-202ENST00000421939 TAOK2Q9UL54 1235 aa31.7■■■□□ 2.67
CDK9-202ENST00000421939 USP17L12C9JPN9 530 aa31.69■■■□□ 2.66
CDK9-202ENST00000421939 USP17L21D6R901 530 aa31.69■■■□□ 2.66
CDK9-202ENST00000421939 CAPN15O75808 1086 aa31.69■■■□□ 2.66
CDK9-202ENST00000421939 HMGCS2P54868 508 aa31.69■■■□□ 2.66
CDK9-202ENST00000421939 PROCA1Q8NCQ7 364 aaPredicted RBP31.69■■■□□ 2.66
CDK9-202ENST00000421939 CD99L2Q8TCZ2 262 aa31.69■■■□□ 2.66
CDK9-202ENST00000421939 AGTPBP1Q9UPW5 1226 aa31.69■■■□□ 2.66
CDK9-202ENST00000421939 SLC45A1Q9Y2W3 748 aa31.69■■■□□ 2.66
CDK9-202ENST00000421939 ADGRA2Q96PE1 1338 aa31.69■■■□□ 2.66
CDK9-202ENST00000421939 MTMR2Q13614 643 aa31.68■■■□□ 2.66
CDK9-202ENST00000421939 PKN2Q16513 984 aaKnown RBP31.68■■■□□ 2.66
CDK9-202ENST00000421939 ABCB5Q2M3G0 1257 aa31.68■■■□□ 2.66
CDK9-202ENST00000421939 ZMYM1Q5SVZ6 1142 aa31.68■■■□□ 2.66
CDK9-202ENST00000421939 C12orf60Q5U649 245 aa31.68■■■□□ 2.66
CDK9-202ENST00000421939 SWAP70Q9UH65 585 aa31.68■■■□□ 2.66
CDK9-202ENST00000421939 CYP2D7A0A087X1C5 515 aa31.67■■■□□ 2.66
CDK9-202ENST00000421939 GNAT2P19087 354 aa31.67■■■□□ 2.66
CDK9-202ENST00000421939 SH3D19Q5HYK7 790 aa31.67■■■□□ 2.66
CDK9-202ENST00000421939 GIMAP6Q6P9H5 292 aa31.67■■■□□ 2.66
CDK9-202ENST00000421939 PLEKHM2Q8IWE5 1019 aa31.67■■■□□ 2.66
CDK9-202ENST00000421939 SLC44A5Q8NCS7 719 aa31.67■■■□□ 2.66
CDK9-202ENST00000421939 DYNLL2Q96FJ2 89 aa31.67■■■□□ 2.66
CDK9-202ENST00000421939 ARPP21Q9UBL0 812 aaPredicted RBP31.67■■■□□ 2.66
CDK9-202ENST00000421939 GSG1L2A8MUP6 293 aa31.66■■■□□ 2.66
CDK9-202ENST00000421939 BACE1P56817 501 aa31.66■■■□□ 2.66
CDK9-202ENST00000421939 TREML2Q5T2D2 321 aa31.66■■■□□ 2.66
CDK9-202ENST00000421939 CTR9Q6PD62 1173 aa31.66■■■□□ 2.66
CDK9-202ENST00000421939 SEC62Q99442 399 aaKnown RBP31.66■■■□□ 2.66
CDK9-202ENST00000421939 CABP5Q9NP86 173 aa31.66■■■□□ 2.66
CDK9-202ENST00000421939 CYP2C8P10632 490 aa31.65■■■□□ 2.66
CDK9-202ENST00000421939 RAB3GAP1Q15042 981 aa31.65■■■□□ 2.66
CDK9-202ENST00000421939 C17orf99Q6UX52 265 aa31.65■■■□□ 2.66
CDK9-202ENST00000421939 OSBPL3Q9H4L5 887 aa31.65■■■□□ 2.66
CDK9-202ENST00000421939 CPA4Q9UI42 421 aa31.65■■■□□ 2.66
CDK9-202ENST00000421939 TRIM17Q9Y577 477 aa31.65■■■□□ 2.66
CDK9-202ENST00000421939 OTOP1Q7RTM1 612 aa31.64■■■□□ 2.66
CDK9-202ENST00000421939 MYH8P13535 1937 aa31.64■■■□□ 2.66
CDK9-202ENST00000421939 USP17L10C9JJH3 530 aa31.63■■■□□ 2.65
CDK9-202ENST00000421939 SMIM22K7EJ46 135 aa31.63■■■□□ 2.65
CDK9-202ENST00000421939 EPB41L4AQ9HCS5 686 aaPredicted RBP31.63■■■□□ 2.65
CDK9-202ENST00000421939 TMOD4Q9NZQ9 345 aa31.63■■■□□ 2.65
CDK9-202ENST00000421939 PNMA3Q9UL41 463 aa31.63■■■□□ 2.65
CDK9-202ENST00000421939 TRIM6-TRIM34B2RNG4 842 aa31.62■■■□□ 2.65
CDK9-202ENST00000421939 C19orf81C9J6K1 198 aa31.62■■■□□ 2.65
CDK9-202ENST00000421939 SBK1Q52WX2 424 aa31.62■■■□□ 2.65
CDK9-202ENST00000421939 FBXO46Q6PJ61 603 aaPredicted RBP31.62■■■□□ 2.65
CDK9-202ENST00000421939 C16orf86Q6ZW13 317 aa31.62■■■□□ 2.65
CDK9-202ENST00000421939 EFCC1Q9HA90 598 aa31.62■■■□□ 2.65
CDK9-202ENST00000421939 HTTP42858 3142 aa31.62■■■□□ 2.65
CDK9-202ENST00000421939 MPHOSPH10O00566 681 aaKnown RBP31.61■■■□□ 2.65
CDK9-202ENST00000421939 TDO2P48775 406 aa31.61■■■□□ 2.65
CDK9-202ENST00000421939 CAP1Q01518 475 aa31.61■■■□□ 2.65
CDK9-202ENST00000421939 PABPC4Q13310 644 aaKnown RBP eCLIP31.61■■■□□ 2.65
CDK9-202ENST00000421939 TICAM2Q86XR7 235 aa31.61■■■□□ 2.65
CDK9-202ENST00000421939 SMCR8Q8TEV9 937 aaPredicted RBP31.61■■■□□ 2.65
CDK9-202ENST00000421939 FEZ1Q99689 392 aa31.61■■■□□ 2.65
CDK9-202ENST00000421939 APPP05067 770 aa31.6■■■□□ 2.65
CDK9-202ENST00000421939 GUCY1A2P33402 732 aa31.6■■■□□ 2.65
CDK9-202ENST00000421939 CDK8P49336 464 aa31.6■■■□□ 2.65
CDK9-202ENST00000421939 LACTBP83111 547 aaPredicted RBP31.6■■■□□ 2.65
CDK9-202ENST00000421939 ARHGEF6Q15052 776 aa31.6■■■□□ 2.65
CDK9-202ENST00000421939 ROBO3Q96MS0 1386 aa31.59■■■□□ 2.65
CDK9-202ENST00000421939 PATL2C9JE40 543 aaKnown RBP31.59■■■□□ 2.65
CDK9-202ENST00000421939 BCRP11274 1271 aa31.59■■■□□ 2.65
CDK9-202ENST00000421939 KIF22Q14807 665 aa31.59■■■□□ 2.65
CDK9-202ENST00000421939 SEPT2Q15019 361 aa31.59■■■□□ 2.65
CDK9-202ENST00000421939 TMEM179Q6ZVK1 233 aa31.59■■■□□ 2.65
CDK9-202ENST00000421939 NACAP1Q9BZK3 213 aa31.59■■■□□ 2.65
CDK9-202ENST00000421939 USP17L2Q6R6M4 530 aa31.58■■■□□ 2.65
CDK9-202ENST00000421939 RILPL2Q969X0 211 aa31.58■■■□□ 2.65
CDK9-202ENST00000421939 HPS5Q9UPZ3 1129 aa31.58■■■□□ 2.65
CDK9-202ENST00000421939 ZSWIM8A7E2V4 1837 aa31.57■■■□□ 2.64
CDK9-202ENST00000421939 MINDY4BA8MYZ0 360 aa31.57■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms