RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 SYNRGQ9UMZ2 1314 aa18.86■□□□□ 0.61
PKP4-204ENST00000421462 A0A1B0GTH6 734 aa18.86■□□□□ 0.61
PKP4-204ENST00000421462 MFAP3LO75121 409 aa18.86■□□□□ 0.61
PKP4-204ENST00000421462 SNRPA1P09661 255 aaKnown RBP18.86■□□□□ 0.61
PKP4-204ENST00000421462 PPARDQ03181 441 aa18.86■□□□□ 0.61
PKP4-204ENST00000421462 ARHGEF25Q86VW2 580 aa18.86■□□□□ 0.61
PKP4-204ENST00000421462 CCDC148Q8NFR7 591 aa18.86■□□□□ 0.61
PKP4-204ENST00000421462 PPM1EQ8WY54 764 aa18.86■□□□□ 0.61
PKP4-204ENST00000421462 CSRNP2Q9H175 543 aa18.86■□□□□ 0.61
PKP4-204ENST00000421462 USP5P45974 858 aa18.86■□□□□ 0.61
PKP4-204ENST00000421462 CCT5P48643 541 aa18.86■□□□□ 0.61
PKP4-204ENST00000421462 PLCD1P51178 756 aa18.86■□□□□ 0.61
PKP4-204ENST00000421462 GBP3Q9H0R5 595 aa18.86■□□□□ 0.61
PKP4-204ENST00000421462 IFIT3O14879 490 aaKnown RBP18.85■□□□□ 0.61
PKP4-204ENST00000421462 GYPCP04921 128 aa18.85■□□□□ 0.61
PKP4-204ENST00000421462 POLD4Q9HCU8 107 aa18.85■□□□□ 0.61
PKP4-204ENST00000421462 TAB2Q9NYJ8 693 aa18.85■□□□□ 0.61
PKP4-204ENST00000421462 CTNND2Q9UQB3 1225 aa18.85■□□□□ 0.61
PKP4-204ENST00000421462 MYH8P13535 1937 aa18.85■□□□□ 0.61
PKP4-204ENST00000421462 CORO7P57737 925 aa18.85■□□□□ 0.61
PKP4-204ENST00000421462 ERVK-24P63145 666 aa18.85■□□□□ 0.61
PKP4-204ENST00000421462 PIP4K2BP78356 416 aa18.85■□□□□ 0.61
PKP4-204ENST00000421462 OXER1Q8TDS5 423 aa18.85■□□□□ 0.61
PKP4-204ENST00000421462 APPBP2Q92624 585 aa18.85■□□□□ 0.61
PKP4-204ENST00000421462 BLZF1Q9H2G9 400 aa18.85■□□□□ 0.61
PKP4-204ENST00000421462 MKRN1Q9UHC7 482 aaKnown RBP18.85■□□□□ 0.61
PKP4-204ENST00000421462 SLC12A7Q9Y666 1083 aa18.85■□□□□ 0.61
PKP4-204ENST00000421462 FAM205CA6NFA0 338 aa18.85■□□□□ 0.61
PKP4-204ENST00000421462 CTDSPL2Q05D32 466 aa18.85■□□□□ 0.61
PKP4-204ENST00000421462 KCNH5Q8NCM2 988 aa18.85■□□□□ 0.61
PKP4-204ENST00000421462 CAGE1Q8TC20 777 aa18.85■□□□□ 0.61
PKP4-204ENST00000421462 EEF2KMTQ96G04 330 aa18.85■□□□□ 0.61
PKP4-204ENST00000421462 CHP1Q99653 195 aa18.85■□□□□ 0.61
PKP4-204ENST00000421462 NBPF3Q9H094 633 aa18.85■□□□□ 0.61
PKP4-204ENST00000421462 MED1Q15648 1581 aaPredicted RBP18.84■□□□□ 0.61
PKP4-204ENST00000421462 GPIHBP1Q8IV16 184 aa18.84■□□□□ 0.61
PKP4-204ENST00000421462 LTN1O94822 1766 aa18.84■□□□□ 0.61
PKP4-204ENST00000421462 CSB-PGBD3P0DP91 1061 aa18.84■□□□□ 0.61
PKP4-204ENST00000421462 CCDC57Q2TAC2 916 aa18.84■□□□□ 0.61
PKP4-204ENST00000421462 RASGRP2Q7LDG7 609 aa18.84■□□□□ 0.61
PKP4-204ENST00000421462 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.84■□□□□ 0.61
PKP4-204ENST00000421462 FBXO2Q9UK22 296 aaPredicted RBP18.84■□□□□ 0.61
PKP4-204ENST00000421462 SH2B2O14492 632 aaPredicted RBP18.83■□□□□ 0.61
PKP4-204ENST00000421462 MYO1BO43795 1136 aa18.83■□□□□ 0.61
PKP4-204ENST00000421462 KRT9P35527 623 aa18.83■□□□□ 0.61
PKP4-204ENST00000421462 GGCXP38435 758 aa18.83■□□□□ 0.61
PKP4-204ENST00000421462 CRACR2AQ9BSW2 395 aa18.83■□□□□ 0.61
PKP4-204ENST00000421462 CWC25Q9NXE8 425 aaPredicted RBP18.83■□□□□ 0.61
PKP4-204ENST00000421462 CASP7P55210 303 aa18.83■□□□□ 0.6
PKP4-204ENST00000421462 ADD3Q9UEY8 706 aaKnown RBP18.83■□□□□ 0.6
PKP4-204ENST00000421462 WWC3Q9ULE0 1092 aa18.83■□□□□ 0.6
PKP4-204ENST00000421462 SYF2O95926 243 aaKnown RBP18.82■□□□□ 0.6
PKP4-204ENST00000421462 A1BGP04217 495 aa18.82■□□□□ 0.6
PKP4-204ENST00000421462 MMS19Q96T76 1030 aa18.82■□□□□ 0.6
PKP4-204ENST00000421462 TBX22Q9Y458 520 aa18.82■□□□□ 0.6
PKP4-204ENST00000421462 PPFIA4O75335 1185 aa18.82■□□□□ 0.6
PKP4-204ENST00000421462 IBSPP21815 317 aaPredicted RBP18.82■□□□□ 0.6
PKP4-204ENST00000421462 SPATA1Q5VX52 437 aa18.82■□□□□ 0.6
PKP4-204ENST00000421462 TTF2Q9UNY4 1162 aaKnown RBP18.82■□□□□ 0.6
PKP4-204ENST00000421462 A0A087X0B3 334 aa18.82■□□□□ 0.6
PKP4-204ENST00000421462 PTPREP23469 700 aa18.82■□□□□ 0.6
PKP4-204ENST00000421462 STIM1Q13586 685 aa18.82■□□□□ 0.6
PKP4-204ENST00000421462 CNGA4Q8IV77 575 aa18.82■□□□□ 0.6
PKP4-204ENST00000421462 SAMM50Q9Y512 469 aa18.82■□□□□ 0.6
PKP4-204ENST00000421462 MATR3P43243 847 aaKnown RBP eCLIP18.81■□□□□ 0.61e-6■■■■□ 23.3
PKP4-204ENST00000421462 WHAMMP3Q1A5X7 153 aa18.81■□□□□ 0.6
PKP4-204ENST00000421462 PLBD2Q8NHP8 589 aa18.81■□□□□ 0.6
PKP4-204ENST00000421462 MRC1P22897 1456 aa18.81■□□□□ 0.6
PKP4-204ENST00000421462 ACTN4O43707 911 aaKnown RBP18.81■□□□□ 0.6
PKP4-204ENST00000421462 GUCY2CP25092 1073 aa18.81■□□□□ 0.6
PKP4-204ENST00000421462 NTRK3Q16288 839 aa18.81■□□□□ 0.6
PKP4-204ENST00000421462 FBXW10Q5XX13 1052 aa18.81■□□□□ 0.6
PKP4-204ENST00000421462 APTXQ7Z2E3 356 aaKnown RBP18.81■□□□□ 0.6
PKP4-204ENST00000421462 MED4Q9NPJ6 270 aa18.81■□□□□ 0.6
PKP4-204ENST00000421462 ZNF185O15231 689 aa18.8■□□□□ 0.6
PKP4-204ENST00000421462 ATP1A1P05023 1023 aaKnown RBP18.8■□□□□ 0.6
PKP4-204ENST00000421462 SARSP49591 514 aaKnown RBP18.8■□□□□ 0.6
PKP4-204ENST00000421462 MNAT1P51948 309 aa18.8■□□□□ 0.6
PKP4-204ENST00000421462 ORAI2Q96SN7 254 aa18.8■□□□□ 0.6
PKP4-204ENST00000421462 FAM217BQ9NTX9 383 aaPredicted RBP18.8■□□□□ 0.6
PKP4-204ENST00000421462 MYBL2P10244 700 aa18.8■□□□□ 0.6
PKP4-204ENST00000421462 RRAGBQ5VZM2 374 aa18.8■□□□□ 0.6
PKP4-204ENST00000421462 TADA2BQ86TJ2 420 aa18.8■□□□□ 0.6
PKP4-204ENST00000421462 NAA15Q9BXJ9 866 aaKnown RBP18.8■□□□□ 0.6
PKP4-204ENST00000421462 ARHGAP25P42331 645 aa18.8■□□□□ 0.6
PKP4-204ENST00000421462 DPYDQ12882 1025 aa18.8■□□□□ 0.6
PKP4-204ENST00000421462 LRP10Q7Z4F1 713 aa18.8■□□□□ 0.6
PKP4-204ENST00000421462 FBXL16Q8N461 479 aa18.8■□□□□ 0.6
PKP4-204ENST00000421462 KAT14Q9H8E8 782 aa18.8■□□□□ 0.6
PKP4-204ENST00000421462 ABHD10Q9NUJ1 306 aa18.8■□□□□ 0.6
PKP4-204ENST00000421462 CPDO75976 1380 aa18.79■□□□□ 0.6
PKP4-204ENST00000421462 FAM237AA0A1B0GTK4 181 aa18.79■□□□□ 0.6
PKP4-204ENST00000421462 KRT31Q15323 416 aa18.79■□□□□ 0.6
PKP4-204ENST00000421462 TRIM22Q8IYM9 498 aa18.79■□□□□ 0.6
PKP4-204ENST00000421462 ZSWIM5Q9P217 1185 aa18.79■□□□□ 0.6
PKP4-204ENST00000421462 HPCAL4Q9UM19 191 aa18.79■□□□□ 0.6
PKP4-204ENST00000421462 H7C1W4 665 aa18.79■□□□□ 0.6
PKP4-204ENST00000421462 MMP1P03956 469 aa18.79■□□□□ 0.6
PKP4-204ENST00000421462 ZFYP08048 801 aaPredicted RBP18.79■□□□□ 0.6
PKP4-204ENST00000421462 CCDC122Q5T0U0 273 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms