RNA–Protein interactions for RNA: ENST00000415891.5

CLIP4-205, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-205ENST00000415891 NRDE2Q9H7Z3 1164 aa7.59□□□□□ -1.19
CLIP4-205ENST00000415891 TTC12Q9H892 705 aaPredicted RBP7.59□□□□□ -1.19
CLIP4-205ENST00000415891 DAAM1Q9Y4D1 1078 aa7.59□□□□□ -1.19
CLIP4-205ENST00000415891 PLEKHG2Q9H7P9 1386 aa7.59□□□□□ -1.19
CLIP4-205ENST00000415891 EME2A4GXA9 379 aaPredicted RBP7.59□□□□□ -1.19
CLIP4-205ENST00000415891 P4HA2O15460 535 aa7.59□□□□□ -1.19
CLIP4-205ENST00000415891 CEP104O60308 925 aa7.59□□□□□ -1.19
CLIP4-205ENST00000415891 U2AF2P26368 475 aaKnown RBP eCLIP7.59□□□□□ -1.192e-8■■■■■ 36.5
CLIP4-205ENST00000415891 PIP4K2BP78356 416 aa7.59□□□□□ -1.19
CLIP4-205ENST00000415891 FOXK1P85037 733 aa7.59□□□□□ -1.19
CLIP4-205ENST00000415891 USP4Q13107 963 aa7.59□□□□□ -1.19
CLIP4-205ENST00000415891 PABPC4Q13310 644 aaKnown RBP eCLIP7.59□□□□□ -1.19
CLIP4-205ENST00000415891 SNX1Q13596 522 aa7.59□□□□□ -1.19
CLIP4-205ENST00000415891 AMHR2Q16671 573 aa7.59□□□□□ -1.19
CLIP4-205ENST00000415891 ISM2Q6H9L7 571 aa7.59□□□□□ -1.19
CLIP4-205ENST00000415891 HIBCHQ6NVY1 386 aaPredicted RBP7.59□□□□□ -1.19
CLIP4-205ENST00000415891 KSR2Q6VAB6 950 aa7.59□□□□□ -1.19
CLIP4-205ENST00000415891 SPICE1Q8N0Z3 855 aa7.59□□□□□ -1.19
CLIP4-205ENST00000415891 PGBD3Q8N328 593 aa7.59□□□□□ -1.19
CLIP4-205ENST00000415891 AFAP1Q8N556 730 aa7.59□□□□□ -1.19
CLIP4-205ENST00000415891 TTC39CQ8N584 583 aa7.59□□□□□ -1.19
CLIP4-205ENST00000415891 USP38Q8NB14 1042 aa7.59□□□□□ -1.19
CLIP4-205ENST00000415891 GIMAP7Q8NHV1 300 aa7.59□□□□□ -1.19
CLIP4-205ENST00000415891 B4GALNT2Q8NHY0 566 aa7.59□□□□□ -1.19
CLIP4-205ENST00000415891 SLKQ9H2G2 1235 aaPredicted RBP7.59□□□□□ -1.19
CLIP4-205ENST00000415891 MRPL46Q9H2W6 279 aaKnown RBP7.59□□□□□ -1.19
CLIP4-205ENST00000415891 ACBD3Q9H3P7 528 aa7.59□□□□□ -1.19
CLIP4-205ENST00000415891 ZSWIM6Q9HCJ5 1215 aa7.59□□□□□ -1.19
CLIP4-205ENST00000415891 A1CFQ9NQ94 594 aaKnown RBP7.59□□□□□ -1.19
CLIP4-205ENST00000415891 DDX21Q9NR30 783 aaKnown RBP eCLIP7.59□□□□□ -1.19
CLIP4-205ENST00000415891 ENO4A6NNW6 628 aa7.58□□□□□ -1.2
CLIP4-205ENST00000415891 TOR1BO14657 336 aa7.58□□□□□ -1.2
CLIP4-205ENST00000415891 NMT2O60551 498 aa7.58□□□□□ -1.2
CLIP4-205ENST00000415891 ELF1P32519 619 aa7.58□□□□□ -1.2
CLIP4-205ENST00000415891 LAMB3Q13751 1172 aa7.58□□□□□ -1.2
CLIP4-205ENST00000415891 SYT10Q6XYQ8 523 aa7.58□□□□□ -1.2
CLIP4-205ENST00000415891 ANKRD42Q8N9B4 389 aa7.58□□□□□ -1.2
CLIP4-205ENST00000415891 NFATC2IPQ8NCF5 419 aa7.58□□□□□ -1.2
CLIP4-205ENST00000415891 MSANTD4Q8NCY6 345 aa7.58□□□□□ -1.2
CLIP4-205ENST00000415891 OXER1Q8TDS5 423 aa7.58□□□□□ -1.2
CLIP4-205ENST00000415891 STON2Q8WXE9 905 aa7.58□□□□□ -1.2
CLIP4-205ENST00000415891 TSGA13Q96PP4 275 aa7.58□□□□□ -1.2
CLIP4-205ENST00000415891 TCP11L1Q9NUJ3 509 aa7.58□□□□□ -1.2
CLIP4-205ENST00000415891 PARP2Q9UGN5 583 aa7.58□□□□□ -1.2
CLIP4-205ENST00000415891 FBXO10Q9UK96 956 aa7.58□□□□□ -1.2
CLIP4-205ENST00000415891 RIMKLBQ9ULI2 386 aa7.58□□□□□ -1.2
CLIP4-205ENST00000415891 RTCAO00442 366 aaKnown RBP7.58□□□□□ -1.2
CLIP4-205ENST00000415891 PRMT3O60678 531 aa7.58□□□□□ -1.2
CLIP4-205ENST00000415891 CPP00450 1065 aa7.58□□□□□ -1.2
CLIP4-205ENST00000415891 ENDOUP21128 410 aaKnown RBP7.58□□□□□ -1.2
CLIP4-205ENST00000415891 RANBP1P43487 201 aa7.58□□□□□ -1.2
CLIP4-205ENST00000415891 SARSP49591 514 aaKnown RBP7.58□□□□□ -1.2
CLIP4-205ENST00000415891 PPM1FP49593 454 aaPredicted RBP7.58□□□□□ -1.2
CLIP4-205ENST00000415891 GUCY1B3Q02153 619 aa7.58□□□□□ -1.2
CLIP4-205ENST00000415891 PUM3Q15397 648 aaKnown RBP7.58□□□□□ -1.2
CLIP4-205ENST00000415891 PRPF38BQ5VTL8 546 aaKnown RBP7.58□□□□□ -1.2
CLIP4-205ENST00000415891 ANO1Q5XXA6 986 aa7.58□□□□□ -1.2
CLIP4-205ENST00000415891 NAA16Q6N069 864 aaPredicted RBP7.58□□□□□ -1.2
CLIP4-205ENST00000415891 SWSAP1Q6NVH7 229 aa7.58□□□□□ -1.2
CLIP4-205ENST00000415891 BTN2A1Q7KYR7 527 aa7.58□□□□□ -1.2
CLIP4-205ENST00000415891 PNMA8AQ86V59 439 aaPredicted RBP7.58□□□□□ -1.2
CLIP4-205ENST00000415891 OR8H1Q8NGG4 311 aa7.58□□□□□ -1.2
CLIP4-205ENST00000415891 RASSF8Q8NHQ8 419 aa7.58□□□□□ -1.2
CLIP4-205ENST00000415891 NUDT16Q96DE0 195 aaKnown RBP7.58□□□□□ -1.2
CLIP4-205ENST00000415891 SRRTQ9BXP5 876 aaKnown RBP7.58□□□□□ -1.2
CLIP4-205ENST00000415891 HOMER2Q9NSB8 354 aa7.58□□□□□ -1.2
CLIP4-205ENST00000415891 RYDENQ9NUL5 291 aaKnown RBP7.58□□□□□ -1.2
CLIP4-205ENST00000415891 PFDN2Q9UHV9 154 aa7.58□□□□□ -1.2
CLIP4-205ENST00000415891 HERC5Q9UII4 1024 aaKnown RBP7.58□□□□□ -1.2
CLIP4-205ENST00000415891 PNMA8BQ9ULN7 279 aaPredicted RBP7.58□□□□□ -1.2
CLIP4-205ENST00000415891 CASQ2O14958 399 aaPredicted RBP7.57□□□□□ -1.2
CLIP4-205ENST00000415891 PPP1R12BO60237 982 aaPredicted RBP7.57□□□□□ -1.2
CLIP4-205ENST00000415891 SKIP12755 728 aa7.57□□□□□ -1.2
CLIP4-205ENST00000415891 PRLRP16471 622 aa7.57□□□□□ -1.2
CLIP4-205ENST00000415891 TMOD1P28289 359 aa7.57□□□□□ -1.2
CLIP4-205ENST00000415891 CYP4A11Q02928 519 aa7.57□□□□□ -1.2
CLIP4-205ENST00000415891 BNIP1Q12981 228 aa7.57□□□□□ -1.2
CLIP4-205ENST00000415891 MOGSQ13724 837 aa7.57□□□□□ -1.2
CLIP4-205ENST00000415891 INAQ16352 499 aa7.57□□□□□ -1.2
CLIP4-205ENST00000415891 RILPL1Q5EBL4 403 aa7.57□□□□□ -1.2
CLIP4-205ENST00000415891 LVRNQ6Q4G3 990 aa7.57□□□□□ -1.2
CLIP4-205ENST00000415891 MAATS1Q7Z4T9 603 aa7.57□□□□□ -1.2
CLIP4-205ENST00000415891 ZNF804AQ7Z570 1209 aa7.57□□□□□ -1.2
CLIP4-205ENST00000415891 METTL3Q86U44 580 aaKnown RBP7.57□□□□□ -1.2
CLIP4-205ENST00000415891 DZIP1LQ8IYY4 767 aaKnown RBP7.57□□□□□ -1.2
CLIP4-205ENST00000415891 TRIML2Q8N7C3 387 aa7.57□□□□□ -1.2
CLIP4-205ENST00000415891 SPERTQ8NA61 448 aa7.57□□□□□ -1.2
CLIP4-205ENST00000415891 SPATA18Q8TC71 538 aa7.57□□□□□ -1.2
CLIP4-205ENST00000415891 PARD3BQ8TEW8 1205 aa7.57□□□□□ -1.2
CLIP4-205ENST00000415891 AKT1S1Q96B36 256 aa7.57□□□□□ -1.2
CLIP4-205ENST00000415891 TRMT2BQ96GJ1 504 aaKnown RBP7.57□□□□□ -1.2
CLIP4-205ENST00000415891 NACAP1Q9BZK3 213 aa7.57□□□□□ -1.2
CLIP4-205ENST00000415891 CYP4F11Q9HBI6 524 aa7.57□□□□□ -1.2
CLIP4-205ENST00000415891 ZC3H7BQ9UGR2 993 aaKnown RBP7.57□□□□□ -1.2
CLIP4-205ENST00000415891 DHX57Q6P158 1386 aaKnown RBP7.57□□□□□ -1.2
CLIP4-205ENST00000415891 LRRC72A6NJI9 287 aa7.57□□□□□ -1.2
CLIP4-205ENST00000415891 RTN2O75298 545 aa7.57□□□□□ -1.2
CLIP4-205ENST00000415891 FERP16591 822 aa7.57□□□□□ -1.2
CLIP4-205ENST00000415891 NDUFV2P19404 249 aa7.57□□□□□ -1.2
CLIP4-205ENST00000415891 MTHFRP42898 656 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms