RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 PUS7LQ9H0K6 701 aaKnown RBP31.77■■■□□ 2.68
VEGFA-207ENST00000413642 SLC45A1Q9Y2W3 748 aa31.77■■■□□ 2.68
VEGFA-207ENST00000413642 SHMT1P34896 483 aa31.76■■■□□ 2.67
VEGFA-207ENST00000413642 KIF22Q14807 665 aa31.76■■■□□ 2.67
VEGFA-207ENST00000413642 PTCH2Q9Y6C5 1203 aa31.76■■■□□ 2.67
VEGFA-207ENST00000413642 SH3D19Q5HYK7 790 aa31.75■■■□□ 2.67
VEGFA-207ENST00000413642 ANKRD45Q5TZF3 282 aa31.75■■■□□ 2.67
VEGFA-207ENST00000413642 KBTBD3Q8NAB2 608 aa31.75■■■□□ 2.67
VEGFA-207ENST00000413642 PROCA1Q8NCQ7 364 aaPredicted RBP31.75■■■□□ 2.67
VEGFA-207ENST00000413642 SMIM22K7EJ46 135 aa31.74■■■□□ 2.67
VEGFA-207ENST00000413642 PSMC4P43686 418 aa31.74■■■□□ 2.67
VEGFA-207ENST00000413642 HDAC1Q13547 482 aaPredicted RBP31.74■■■□□ 2.67
VEGFA-207ENST00000413642 ARHGEF6Q15052 776 aa31.74■■■□□ 2.67
VEGFA-207ENST00000413642 ZSCAN25Q6NSZ9 544 aa31.74■■■□□ 2.67
VEGFA-207ENST00000413642 EXOC6Q8TAG9 804 aa31.74■■■□□ 2.67
VEGFA-207ENST00000413642 PI4K2BQ8TCG2 481 aa31.74■■■□□ 2.67
VEGFA-207ENST00000413642 TRIM47Q96LD4 638 aa31.74■■■□□ 2.67
VEGFA-207ENST00000413642 ZSWIM8A7E2V4 1837 aa31.74■■■□□ 2.67
VEGFA-207ENST00000413642 BACE1P56817 501 aa31.73■■■□□ 2.67
VEGFA-207ENST00000413642 GABPAQ06546 454 aa31.73■■■□□ 2.67
VEGFA-207ENST00000413642 CERKLQ49MI3 558 aaPredicted RBP31.73■■■□□ 2.67
VEGFA-207ENST00000413642 GINM1Q9NU53 330 aa31.73■■■□□ 2.67
VEGFA-207ENST00000413642 CYP2D7A0A087X1C5 515 aa31.72■■■□□ 2.67
VEGFA-207ENST00000413642 SLC44A5Q8NCS7 719 aa31.72■■■□□ 2.67
VEGFA-207ENST00000413642 SMCR8Q8TEV9 937 aaPredicted RBP31.72■■■□□ 2.67
VEGFA-207ENST00000413642 DYNLL2Q96FJ2 89 aa31.72■■■□□ 2.67
VEGFA-207ENST00000413642 MYH1P12882 1939 aa31.72■■■□□ 2.67
VEGFA-207ENST00000413642 ATAD5Q96QE3 1844 aa31.72■■■□□ 2.67
VEGFA-207ENST00000413642 TTC41PQ6P2S7 1318 aa31.72■■■□□ 2.67
VEGFA-207ENST00000413642 ABCB5Q2M3G0 1257 aa31.71■■■□□ 2.67
VEGFA-207ENST00000413642 SUPT16HQ9Y5B9 1047 aaKnown RBP31.71■■■□□ 2.67
VEGFA-207ENST00000413642 SLC4A4Q9Y6R1 1079 aa31.71■■■□□ 2.67
VEGFA-207ENST00000413642 DDX60LQ5H9U9 1706 aaKnown RBP31.71■■■□□ 2.67
VEGFA-207ENST00000413642 FMNL1O95466 1100 aaPredicted RBP31.7■■■□□ 2.67
VEGFA-207ENST00000413642 ATP8A2Q9NTI2 1148 aa31.7■■■□□ 2.67
VEGFA-207ENST00000413642 PTPRFP10586 1907 aa31.7■■■□□ 2.67
VEGFA-207ENST00000413642 USP17L10C9JJH3 530 aa31.69■■■□□ 2.66
VEGFA-207ENST00000413642 MX1P20591 662 aa31.69■■■□□ 2.66
VEGFA-207ENST00000413642 OSBPP22059 807 aa31.69■■■□□ 2.66
VEGFA-207ENST00000413642 GUCY1A2P33402 732 aa31.69■■■□□ 2.66
VEGFA-207ENST00000413642 MLLT1Q03111 559 aaPredicted RBP31.69■■■□□ 2.66
VEGFA-207ENST00000413642 RAB3GAP1Q15042 981 aa31.69■■■□□ 2.66
VEGFA-207ENST00000413642 OSBP2Q969R2 916 aa31.69■■■□□ 2.66
VEGFA-207ENST00000413642 ASCC2Q9H1I8 757 aaPredicted RBP31.69■■■□□ 2.66
VEGFA-207ENST00000413642 TMOD4Q9NZQ9 345 aa31.69■■■□□ 2.66
VEGFA-207ENST00000413642 SALL3Q9BXA9 1300 aa31.69■■■□□ 2.66
VEGFA-207ENST00000413642 RNF113AO15541 343 aaKnown RBP31.68■■■□□ 2.66
VEGFA-207ENST00000413642 ANKRD13CQ8N6S4 541 aa31.68■■■□□ 2.66
VEGFA-207ENST00000413642 GCC1Q96CN9 775 aa31.68■■■□□ 2.66
VEGFA-207ENST00000413642 STRBPQ96SI9 672 aaKnown RBP31.68■■■□□ 2.66
VEGFA-207ENST00000413642 EMILIN3Q9NT22 766 aa31.68■■■□□ 2.66
VEGFA-207ENST00000413642 C19orf81C9J6K1 198 aa31.67■■■□□ 2.66
VEGFA-207ENST00000413642 USP17L12C9JPN9 530 aa31.67■■■□□ 2.66
VEGFA-207ENST00000413642 USP17L21D6R901 530 aa31.67■■■□□ 2.66
VEGFA-207ENST00000413642 ERC2O15083 957 aa31.67■■■□□ 2.66
VEGFA-207ENST00000413642 GLRX3O76003 335 aaKnown RBP31.67■■■□□ 2.66
VEGFA-207ENST00000413642 ACER1Q8TDN7 264 aa31.67■■■□□ 2.66
VEGFA-207ENST00000413642 ARMC5Q96C12 935 aa31.67■■■□□ 2.66
VEGFA-207ENST00000413642 PNMA3Q9UL41 463 aa31.67■■■□□ 2.66
VEGFA-207ENST00000413642 NAV1Q8NEY1 1877 aa31.67■■■□□ 2.66
VEGFA-207ENST00000413642 ZYXQ15942 572 aaKnown RBP31.66■■■□□ 2.66
VEGFA-207ENST00000413642 C12orf60Q5U649 245 aa31.66■■■□□ 2.66
VEGFA-207ENST00000413642 APPBP2Q92624 585 aa31.66■■■□□ 2.66
VEGFA-207ENST00000413642 CABP5Q9NP86 173 aa31.66■■■□□ 2.66
VEGFA-207ENST00000413642 ZBTB47Q9UFB7 747 aaPredicted RBP31.66■■■□□ 2.66
VEGFA-207ENST00000413642 SRRDQ9UH36 339 aa31.66■■■□□ 2.66
VEGFA-207ENST00000413642 GNRH1P01148 92 aa31.65■■■□□ 2.66
VEGFA-207ENST00000413642 IGHDP01880 384 aa31.65■■■□□ 2.66
VEGFA-207ENST00000413642 PABPC4Q13310 644 aaKnown RBP eCLIP31.65■■■□□ 2.666e-13■■■■■ 112.3
VEGFA-207ENST00000413642 SEPT2Q15019 361 aa31.65■■■□□ 2.66
VEGFA-207ENST00000413642 SH3TC2Q8TF17 1288 aa31.65■■■□□ 2.66
VEGFA-207ENST00000413642 M0R2C6 588 aa31.64■■■□□ 2.66
VEGFA-207ENST00000413642 MPHOSPH10O00566 681 aaKnown RBP31.64■■■□□ 2.66
VEGFA-207ENST00000413642 PEX10O60683 326 aa31.64■■■□□ 2.66
VEGFA-207ENST00000413642 FCGRTP55899 365 aa31.64■■■□□ 2.66
VEGFA-207ENST00000413642 CTR9Q6PD62 1173 aa31.64■■■□□ 2.66
VEGFA-207ENST00000413642 USP17L2Q6R6M4 530 aa31.64■■■□□ 2.66
VEGFA-207ENST00000413642 P2RX7Q99572 595 aaKnown RBP31.64■■■□□ 2.66
VEGFA-207ENST00000413642 LOC285556D6RIA3 1793 aa31.63■■■□□ 2.65
VEGFA-207ENST00000413642 MYCP01106 439 aaPredicted RBP31.63■■■□□ 2.65
VEGFA-207ENST00000413642 AAMPQ13685 434 aa31.63■■■□□ 2.65
VEGFA-207ENST00000413642 SLC9C1Q4G0N8 1177 aa31.63■■■□□ 2.65
VEGFA-207ENST00000413642 FEZ1Q99689 392 aa31.63■■■□□ 2.65
VEGFA-207ENST00000413642 POTEFA5A3E0 1075 aa31.62■■■□□ 2.65
VEGFA-207ENST00000413642 GSG1L2A8MUP6 293 aa31.62■■■□□ 2.65
VEGFA-207ENST00000413642 HOXA7P31268 230 aaPredicted RBP31.62■■■□□ 2.65
VEGFA-207ENST00000413642 PRKCZQ05513 592 aa31.62■■■□□ 2.65
VEGFA-207ENST00000413642 SEC62Q99442 399 aaKnown RBP31.62■■■□□ 2.65
VEGFA-207ENST00000413642 GABRQQ9UN88 632 aa31.62■■■□□ 2.65
VEGFA-207ENST00000413642 MYPNQ86TC9 1320 aa31.61■■■□□ 2.65
VEGFA-207ENST00000413642 ZFYP08048 801 aaPredicted RBP31.61■■■□□ 2.65
VEGFA-207ENST00000413642 HOXD10P28358 340 aa31.61■■■□□ 2.65
VEGFA-207ENST00000413642 PRMT2P55345 433 aa31.61■■■□□ 2.65
VEGFA-207ENST00000413642 IRX3P78415 501 aaPredicted RBP31.61■■■□□ 2.65
VEGFA-207ENST00000413642 B4GALNT3Q6L9W6 998 aa31.61■■■□□ 2.65
VEGFA-207ENST00000413642 ZNF333Q96JL9 665 aa31.61■■■□□ 2.65
VEGFA-207ENST00000413642 FSD1Q9BTV5 496 aa31.61■■■□□ 2.65
VEGFA-207ENST00000413642 RWDD1Q9H446 243 aaPredicted RBP31.61■■■□□ 2.65
VEGFA-207ENST00000413642 SWAP70Q9UH65 585 aa31.61■■■□□ 2.65
VEGFA-207ENST00000413642 GPAA1O43292 621 aa31.6■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms