RNA–Protein interactions for RNA: ENST00000413440.5

PRDM2-206, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-206ENST00000413440 ZKSCAN3Q9BRR0 538 aa6.65□□□□□ -1.34
PRDM2-206ENST00000413440 FKTNO75072 461 aa6.65□□□□□ -1.34
PRDM2-206ENST00000413440 CALML3P27482 149 aa6.65□□□□□ -1.34
PRDM2-206ENST00000413440 ZNF569Q5MCW4 686 aa6.65□□□□□ -1.34
PRDM2-206ENST00000413440 PPP4R3BQ5MIZ7 849 aa6.65□□□□□ -1.34
PRDM2-206ENST00000413440 FASTKD5Q7L8L6 764 aaKnown RBP6.65□□□□□ -1.34
PRDM2-206ENST00000413440 CHST3Q7LGC8 479 aa6.65□□□□□ -1.34
PRDM2-206ENST00000413440 ARHGAP45Q92619 1136 aa6.65□□□□□ -1.34
PRDM2-206ENST00000413440 EVI5LQ96CN4 794 aa6.65□□□□□ -1.34
PRDM2-206ENST00000413440 ERO1AQ96HE7 468 aa6.65□□□□□ -1.34
PRDM2-206ENST00000413440 TFIP11Q9UBB9 837 aaKnown RBP6.65□□□□□ -1.34
PRDM2-206ENST00000413440 CLIP2Q9UDT6 1046 aa6.65□□□□□ -1.34
PRDM2-206ENST00000413440 CPA4Q9UI42 421 aa6.65□□□□□ -1.34
PRDM2-206ENST00000413440 NEFHP12036 1026 aa6.65□□□□□ -1.35
PRDM2-206ENST00000413440 RLBP1P12271 317 aa6.65□□□□□ -1.35
PRDM2-206ENST00000413440 SETQ01105 290 aaPredicted RBP6.65□□□□□ -1.35
PRDM2-206ENST00000413440 NOGQ13253 232 aa6.65□□□□□ -1.35
PRDM2-206ENST00000413440 IFIT1BQ5T764 474 aaKnown RBP6.65□□□□□ -1.35
PRDM2-206ENST00000413440 APBB1IPQ7Z5R6 666 aaPredicted RBP6.65□□□□□ -1.35
PRDM2-206ENST00000413440 CATIPQ7Z7H3 387 aa6.65□□□□□ -1.35
PRDM2-206ENST00000413440 ZNF354CQ86Y25 554 aa6.65□□□□□ -1.35
PRDM2-206ENST00000413440 FERMT1Q9BQL6 677 aa6.65□□□□□ -1.35
PRDM2-206ENST00000413440 SERTAD1Q9UHV2 236 aa6.65□□□□□ -1.35
PRDM2-206ENST00000413440 CRYBG1Q9Y4K1 1723 aa6.65□□□□□ -1.35
PRDM2-206ENST00000413440 POTEIP0CG38 1075 aa6.65□□□□□ -1.35
PRDM2-206ENST00000413440 FOXO4P98177 505 aa6.65□□□□□ -1.35
PRDM2-206ENST00000413440 ARID5AQ03989 594 aa6.65□□□□□ -1.35
PRDM2-206ENST00000413440 CEP85Q6P2H3 762 aa6.65□□□□□ -1.35
PRDM2-206ENST00000413440 CEMIPQ8WUJ3 1361 aa6.65□□□□□ -1.35
PRDM2-206ENST00000413440 PATL2C9JE40 543 aaKnown RBP6.64□□□□□ -1.35
PRDM2-206ENST00000413440 NFKBIEO00221 500 aa6.64□□□□□ -1.35
PRDM2-206ENST00000413440 MYCLP12524 364 aaPredicted RBP6.64□□□□□ -1.35
PRDM2-206ENST00000413440 GNAT2P19087 354 aa6.64□□□□□ -1.35
PRDM2-206ENST00000413440 SOX10P56693 466 aa6.64□□□□□ -1.35
PRDM2-206ENST00000413440 CTDSPL2Q05D32 466 aa6.64□□□□□ -1.35
PRDM2-206ENST00000413440 PDIA6Q15084 440 aa6.64□□□□□ -1.35
PRDM2-206ENST00000413440 FAM47AQ5JRC9 791 aa6.64□□□□□ -1.35
PRDM2-206ENST00000413440 EPHA10Q5JZY3 1008 aa6.64□□□□□ -1.35
PRDM2-206ENST00000413440 SASS6Q6UVJ0 657 aa6.64□□□□□ -1.35
PRDM2-206ENST00000413440 VPS33BQ9H267 617 aa6.64□□□□□ -1.35
PRDM2-206ENST00000413440 PKD2L1Q9P0L9 805 aa6.64□□□□□ -1.35
PRDM2-206ENST00000413440 PCDHB15Q9Y5E8 787 aa6.64□□□□□ -1.35
PRDM2-206ENST00000413440 MFSD14CQ5VZR4 134 aa6.64□□□□□ -1.35
PRDM2-206ENST00000413440 ANKRD35Q8N283 1001 aa6.64□□□□□ -1.35
PRDM2-206ENST00000413440 KCNG4Q8TDN1 519 aa6.64□□□□□ -1.35
PRDM2-206ENST00000413440 UPF3BQ9BZI7 483 aaKnown RBP6.64□□□□□ -1.35
PRDM2-206ENST00000413440 PPFIA3O75145 1194 aa6.64□□□□□ -1.35
PRDM2-206ENST00000413440 PRDM1O75626 825 aa6.64□□□□□ -1.35
PRDM2-206ENST00000413440 ATP6V1E1P36543 226 aa6.64□□□□□ -1.35
PRDM2-206ENST00000413440 NAP1L1P55209 391 aaKnown RBP6.64□□□□□ -1.35
PRDM2-206ENST00000413440 THSD7AQ9UPZ6 1657 aa6.64□□□□□ -1.35
PRDM2-206ENST00000413440 ANKRD62A6NC57 917 aa6.64□□□□□ -1.35
PRDM2-206ENST00000413440 MANSC4A6NHS7 340 aaPredicted RBP6.64□□□□□ -1.35
PRDM2-206ENST00000413440 SEMA3EO15041 775 aa6.64□□□□□ -1.35
PRDM2-206ENST00000413440 PRDX5P30044 214 aa6.64□□□□□ -1.35
PRDM2-206ENST00000413440 KCTD2Q14681 263 aa6.64□□□□□ -1.35
PRDM2-206ENST00000413440 NBPF12Q5TAG4 269 aaPredicted RBP6.64□□□□□ -1.35
PRDM2-206ENST00000413440 NSMFQ6X4W1 530 aa6.64□□□□□ -1.35
PRDM2-206ENST00000413440 CCDC73Q6ZRK6 1079 aa6.64□□□□□ -1.35
PRDM2-206ENST00000413440 CCDC129Q6ZRS4 1044 aa6.64□□□□□ -1.35
PRDM2-206ENST00000413440 CERS3Q8IU89 383 aa6.64□□□□□ -1.35
PRDM2-206ENST00000413440 CKAP2LQ8IYA6 745 aa6.64□□□□□ -1.35
PRDM2-206ENST00000413440 EFCC1Q9HA90 598 aa6.64□□□□□ -1.35
PRDM2-206ENST00000413440 SAMM50Q9Y512 469 aa6.64□□□□□ -1.35
PRDM2-206ENST00000413440 AK9Q5TCS8 1911 aa6.64□□□□□ -1.35
PRDM2-206ENST00000413440 USP17L5A8MUK1 530 aa6.64□□□□□ -1.35
PRDM2-206ENST00000413440 TRAK2O60296 914 aa6.64□□□□□ -1.35
PRDM2-206ENST00000413440 CIAO1O76071 339 aa6.64□□□□□ -1.35
PRDM2-206ENST00000413440 ICA1Q05084 483 aa6.64□□□□□ -1.35
PRDM2-206ENST00000413440 PI16Q6UXB8 463 aa6.64□□□□□ -1.35
PRDM2-206ENST00000413440 LRRC47Q8N1G4 583 aaKnown RBP6.64□□□□□ -1.35
PRDM2-206ENST00000413440 CTCFLQ8NI51 663 aaPredicted RBP6.64□□□□□ -1.35
PRDM2-206ENST00000413440 ZNF592Q92610 1267 aa6.64□□□□□ -1.35
PRDM2-206ENST00000413440 PPP2R3CQ969Q6 453 aa6.64□□□□□ -1.35
PRDM2-206ENST00000413440 CACYBPQ9HB71 228 aaKnown RBP6.64□□□□□ -1.35
PRDM2-206ENST00000413440 ZHX1Q9UKY1 873 aaPredicted RBP6.64□□□□□ -1.35
PRDM2-206ENST00000413440 FRMPD2Q68DX3 1309 aaPredicted RBP6.64□□□□□ -1.35
PRDM2-206ENST00000413440 CYP2B6P20813 491 aa6.63□□□□□ -1.35
PRDM2-206ENST00000413440 BLOC1S2Q6QNY1 142 aa6.63□□□□□ -1.35
PRDM2-206ENST00000413440 MICALL1Q8N3F8 863 aa6.63□□□□□ -1.35
PRDM2-206ENST00000413440 USP44Q9H0E7 712 aa6.63□□□□□ -1.35
PRDM2-206ENST00000413440 PI4KBQ9UBF8 816 aa6.63□□□□□ -1.35
PRDM2-206ENST00000413440 ALAS1P13196 640 aa6.63□□□□□ -1.35
PRDM2-206ENST00000413440 LIG1P18858 919 aa6.63□□□□□ -1.35
PRDM2-206ENST00000413440 SPP2Q13103 211 aa6.63□□□□□ -1.35
PRDM2-206ENST00000413440 TMEM67Q5HYA8 995 aa6.63□□□□□ -1.35
PRDM2-206ENST00000413440 SMARCC2Q8TAQ2 1214 aa6.63□□□□□ -1.35
PRDM2-206ENST00000413440 FAM84BQ96KN1 310 aaPredicted RBP6.63□□□□□ -1.35
PRDM2-206ENST00000413440 MTIF3Q9H2K0 278 aaKnown RBP6.63□□□□□ -1.35
PRDM2-206ENST00000413440 SH3BP5O60239 455 aa6.63□□□□□ -1.35
PRDM2-206ENST00000413440 ZFYP08048 801 aaPredicted RBP6.63□□□□□ -1.35
PRDM2-206ENST00000413440 FMR1Q06787 632 aaKnown RBP eCLIP6.63□□□□□ -1.351e-6■■■■■ 29.6
PRDM2-206ENST00000413440 DLK2Q6UY11 383 aa6.63□□□□□ -1.35
PRDM2-206ENST00000413440 CCDC83Q8IWF9 413 aa6.63□□□□□ -1.35
PRDM2-206ENST00000413440 ALDH1A1P00352 501 aa6.63□□□□□ -1.35
PRDM2-206ENST00000413440 VEGFBP49765 207 aa6.63□□□□□ -1.35
PRDM2-206ENST00000413440 PRMT6Q96LA8 375 aaPredicted RBP6.63□□□□□ -1.35
PRDM2-206ENST00000413440 SLC12A7Q9Y666 1083 aa6.63□□□□□ -1.35
PRDM2-206ENST00000413440 ZEB2O60315 1214 aa6.63□□□□□ -1.35
PRDM2-206ENST00000413440 HMGCS2P54868 508 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms