RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 ZSWIM8A7E2V4 1837 aa18.93■□□□□ 0.62
MCF2L-211ENST00000413354 GDF11O95390 407 aa18.92■□□□□ 0.62
MCF2L-211ENST00000413354 AMOTL1Q8IY63 956 aa18.92■□□□□ 0.62
MCF2L-211ENST00000413354 KBTBD3Q8NAB2 608 aa18.92■□□□□ 0.62
MCF2L-211ENST00000413354 SMCR8Q8TEV9 937 aaPredicted RBP18.92■□□□□ 0.62
MCF2L-211ENST00000413354 ARMT1Q9H993 441 aa18.92■□□□□ 0.62
MCF2L-211ENST00000413354 DCP1AQ9NPI6 582 aaPredicted RBP18.92■□□□□ 0.62
MCF2L-211ENST00000413354 ATP8A2Q9NTI2 1148 aa18.92■□□□□ 0.62
MCF2L-211ENST00000413354 CPA4Q9UI42 421 aa18.92■□□□□ 0.62
MCF2L-211ENST00000413354 GLRX3O76003 335 aaKnown RBP18.91■□□□□ 0.62
MCF2L-211ENST00000413354 HMGCS2P54868 508 aa18.91■□□□□ 0.62
MCF2L-211ENST00000413354 SH3D19Q5HYK7 790 aa18.91■□□□□ 0.62
MCF2L-211ENST00000413354 TATDN1Q6P1N9 297 aa18.91■□□□□ 0.62
MCF2L-211ENST00000413354 SDR42E1Q8WUS8 393 aa18.91■□□□□ 0.62
MCF2L-211ENST00000413354 TMOD4Q9NZQ9 345 aa18.91■□□□□ 0.62
MCF2L-211ENST00000413354 C19orf81C9J6K1 198 aa18.9■□□□□ 0.62
MCF2L-211ENST00000413354 ZFYP08048 801 aaPredicted RBP18.9■□□□□ 0.62
MCF2L-211ENST00000413354 CYP2C8P10632 490 aa18.9■□□□□ 0.62
MCF2L-211ENST00000413354 MX1P20591 662 aa18.9■□□□□ 0.62
MCF2L-211ENST00000413354 PRMT2P55345 433 aa18.9■□□□□ 0.62
MCF2L-211ENST00000413354 BACE1P56817 501 aa18.9■□□□□ 0.62
MCF2L-211ENST00000413354 MTMR2Q13614 643 aa18.9■□□□□ 0.62
MCF2L-211ENST00000413354 CERKLQ49MI3 558 aaPredicted RBP18.9■□□□□ 0.62
MCF2L-211ENST00000413354 TSHZ3Q63HK5 1081 aa18.9■□□□□ 0.62
MCF2L-211ENST00000413354 CABP5Q9NP86 173 aa18.9■□□□□ 0.62
MCF2L-211ENST00000413354 USP17L10C9JJH3 530 aa18.89■□□□□ 0.61
MCF2L-211ENST00000413354 GH2P01242 217 aa18.89■□□□□ 0.61
MCF2L-211ENST00000413354 BCRP11274 1271 aa18.89■□□□□ 0.61
MCF2L-211ENST00000413354 OSBPP22059 807 aa18.89■□□□□ 0.61
MCF2L-211ENST00000413354 RGS19P49795 217 aa18.89■□□□□ 0.61
MCF2L-211ENST00000413354 PLCD1P51178 756 aa18.89■□□□□ 0.61
MCF2L-211ENST00000413354 GABPAQ06546 454 aa18.89■□□□□ 0.61
MCF2L-211ENST00000413354 ANKRD45Q5TZF3 282 aa18.89■□□□□ 0.61
MCF2L-211ENST00000413354 HOXD10P28358 340 aa18.88■□□□□ 0.61
MCF2L-211ENST00000413354 ABCB5Q2M3G0 1257 aa18.88■□□□□ 0.61
MCF2L-211ENST00000413354 SLFNL1Q499Z3 407 aa18.88■□□□□ 0.61
MCF2L-211ENST00000413354 TREML2Q5T2D2 321 aa18.88■□□□□ 0.61
MCF2L-211ENST00000413354 APPBP2Q92624 585 aa18.88■□□□□ 0.61
MCF2L-211ENST00000413354 SWAP70Q9UH65 585 aa18.88■□□□□ 0.61
MCF2L-211ENST00000413354 SLC4A4Q9Y6R1 1079 aa18.88■□□□□ 0.61
MCF2L-211ENST00000413354 RBBP6Q7Z6E9 1792 aaKnown RBP18.88■□□□□ 0.61
MCF2L-211ENST00000413354 RNF113AO15541 343 aaKnown RBP18.87■□□□□ 0.61
MCF2L-211ENST00000413354 SHMT1P34896 483 aa18.87■□□□□ 0.61
MCF2L-211ENST00000413354 PSMC4P43686 418 aa18.87■□□□□ 0.61
MCF2L-211ENST00000413354 FCGRTP55899 365 aa18.87■□□□□ 0.61
MCF2L-211ENST00000413354 SOX10P56693 466 aa18.87■□□□□ 0.61
MCF2L-211ENST00000413354 JAG1P78504 1218 aa18.87■□□□□ 0.61
MCF2L-211ENST00000413354 CAP1Q01518 475 aa18.87■□□□□ 0.61
MCF2L-211ENST00000413354 PI4K2BQ8TCG2 481 aa18.87■□□□□ 0.61
MCF2L-211ENST00000413354 FEZ1Q99689 392 aa18.87■□□□□ 0.61
MCF2L-211ENST00000413354 ARHGAP39Q9C0H5 1083 aa18.87■□□□□ 0.61
MCF2L-211ENST00000413354 PUS7LQ9H0K6 701 aaKnown RBP18.87■□□□□ 0.61
MCF2L-211ENST00000413354 RWDD1Q9H446 243 aaPredicted RBP18.87■□□□□ 0.61
MCF2L-211ENST00000413354 PRKAB2O43741 272 aa18.86■□□□□ 0.61
MCF2L-211ENST00000413354 FMNL1O95466 1100 aaPredicted RBP18.86■□□□□ 0.61
MCF2L-211ENST00000413354 GCLCP48506 637 aaPredicted RBP18.86■□□□□ 0.61
MCF2L-211ENST00000413354 IRX3P78415 501 aaPredicted RBP18.86■□□□□ 0.61
MCF2L-211ENST00000413354 MLLT1Q03111 559 aaPredicted RBP18.86■□□□□ 0.61
MCF2L-211ENST00000413354 SHROOM1Q2M3G4 852 aaPredicted RBP18.86■□□□□ 0.61
MCF2L-211ENST00000413354 USP17L2Q6R6M4 530 aa18.86■□□□□ 0.61
MCF2L-211ENST00000413354 ARMC5Q96C12 935 aa18.86■□□□□ 0.61
MCF2L-211ENST00000413354 KIAA0100Q14667 2235 aaKnown RBP18.85■□□□□ 0.61
MCF2L-211ENST00000413354 CHGBP05060 677 aa18.85■□□□□ 0.61
MCF2L-211ENST00000413354 GNAT2P19087 354 aa18.85■□□□□ 0.61
MCF2L-211ENST00000413354 USP14P54578 494 aa18.85■□□□□ 0.61
MCF2L-211ENST00000413354 RAB3GAP1Q15042 981 aa18.85■□□□□ 0.61
MCF2L-211ENST00000413354 FAM110CQ1W6H9 321 aa18.85■□□□□ 0.61
MCF2L-211ENST00000413354 SLC9C1Q4G0N8 1177 aa18.85■□□□□ 0.61
MCF2L-211ENST00000413354 NBPF11Q86T75 865 aa18.85■□□□□ 0.61
MCF2L-211ENST00000413354 OTUD7AQ8TE49 926 aaPredicted RBP18.85■□□□□ 0.61
MCF2L-211ENST00000413354 FSD1Q9BTV5 496 aa18.85■□□□□ 0.61
MCF2L-211ENST00000413354 ASCC2Q9H1I8 757 aaPredicted RBP18.85■□□□□ 0.61
MCF2L-211ENST00000413354 ARPP21Q9UBL0 812 aaPredicted RBP18.85■□□□□ 0.61
MCF2L-211ENST00000413354 PTCH2Q9Y6C5 1203 aa18.85■□□□□ 0.61
MCF2L-211ENST00000413354 SALL3Q9BXA9 1300 aa18.84■□□□□ 0.61
MCF2L-211ENST00000413354 HOXA7P31268 230 aaPredicted RBP18.84■□□□□ 0.61
MCF2L-211ENST00000413354 GIMAP6Q6P9H5 292 aa18.84■□□□□ 0.61
MCF2L-211ENST00000413354 GTF3C2Q8WUA4 911 aaPredicted RBP18.84■□□□□ 0.61
MCF2L-211ENST00000413354 TRIM47Q96LD4 638 aa18.84■□□□□ 0.61
MCF2L-211ENST00000413354 C12orf42Q96LP6 360 aa18.84■□□□□ 0.61
MCF2L-211ENST00000413354 STRBPQ96SI9 672 aaKnown RBP18.84■□□□□ 0.61
MCF2L-211ENST00000413354 SRRDQ9UH36 339 aa18.84■□□□□ 0.61
MCF2L-211ENST00000413354 DOCK3Q8IZD9 2030 aa18.83■□□□□ 0.61
MCF2L-211ENST00000413354 MYPNQ86TC9 1320 aa18.83■□□□□ 0.61
MCF2L-211ENST00000413354 MPHOSPH10O00566 681 aaKnown RBP18.83■□□□□ 0.6
MCF2L-211ENST00000413354 CYP2D6P10635 497 aa18.83■□□□□ 0.6
MCF2L-211ENST00000413354 C12orf60Q5U649 245 aa18.83■□□□□ 0.6
MCF2L-211ENST00000413354 ANKRD13CQ8N6S4 541 aa18.83■□□□□ 0.6
MCF2L-211ENST00000413354 EXOC6Q8TAG9 804 aa18.83■□□□□ 0.6
MCF2L-211ENST00000413354 OSBP2Q969R2 916 aa18.83■□□□□ 0.6
MCF2L-211ENST00000413354 KIAA1683Q9H0B3 1180 aa18.83■□□□□ 0.6
MCF2L-211ENST00000413354 SUPT16HQ9Y5B9 1047 aaKnown RBP18.83■□□□□ 0.6
MCF2L-211ENST00000413354 HTTP42858 3142 aa18.83■□□□□ 0.6
MCF2L-211ENST00000413354 USP17L12C9JPN9 530 aa18.82■□□□□ 0.6
MCF2L-211ENST00000413354 USP17L21D6R901 530 aa18.82■□□□□ 0.6
MCF2L-211ENST00000413354 GPAA1O43292 621 aa18.82■□□□□ 0.6
MCF2L-211ENST00000413354 ECM2O94769 699 aaPredicted RBP18.82■□□□□ 0.6
MCF2L-211ENST00000413354 CTGFP29279 349 aa18.82■□□□□ 0.6
MCF2L-211ENST00000413354 TMEM179Q6ZVK1 233 aa18.82■□□□□ 0.6
MCF2L-211ENST00000413354 SMC5Q8IY18 1101 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms