RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 FGRP09769 529 aa18.22■□□□□ 0.51
HOXD3-202ENST00000410016 CBX1P83916 185 aa18.22■□□□□ 0.51
HOXD3-202ENST00000410016 CFAP100Q494V2 611 aa18.22■□□□□ 0.51
HOXD3-202ENST00000410016 CLEC4GQ6UXB4 293 aa18.22■□□□□ 0.51
HOXD3-202ENST00000410016 USP49Q70CQ1 688 aa18.22■□□□□ 0.51
HOXD3-202ENST00000410016 BSDC1Q9NW68 430 aaPredicted RBP18.22■□□□□ 0.51
HOXD3-202ENST00000410016 COL22A1Q8NFW1 1626 aaPredicted RBP18.21■□□□□ 0.51
HOXD3-202ENST00000410016 TMEM232C9JQI7 657 aa18.21■□□□□ 0.51
HOXD3-202ENST00000410016 PRR29P0C7W0 189 aa18.21■□□□□ 0.51
HOXD3-202ENST00000410016 ERFEQ4G0M1 354 aa18.21■□□□□ 0.51
HOXD3-202ENST00000410016 SPATA20Q8TB22 786 aa18.21■□□□□ 0.51
HOXD3-202ENST00000410016 ZSCAN10Q96SZ4 725 aaPredicted RBP18.21■□□□□ 0.51
HOXD3-202ENST00000410016 GNL3LQ9NVN8 582 aaKnown RBP18.21■□□□□ 0.51
HOXD3-202ENST00000410016 HOOK1Q9UJC3 728 aaKnown RBP18.21■□□□□ 0.51
HOXD3-202ENST00000410016 MORC2Q9Y6X9 1032 aaPredicted RBP18.21■□□□□ 0.51
HOXD3-202ENST00000410016 ACTN4O43707 911 aaKnown RBP18.2■□□□□ 0.5
HOXD3-202ENST00000410016 MORC3Q14149 939 aa18.2■□□□□ 0.5
HOXD3-202ENST00000410016 ANKRD18AQ8IVF6 992 aa18.2■□□□□ 0.5
HOXD3-202ENST00000410016 FAM84BQ96KN1 310 aaPredicted RBP18.2■□□□□ 0.5
HOXD3-202ENST00000410016 L2HGDHQ9H9P8 463 aa18.2■□□□□ 0.5
HOXD3-202ENST00000410016 MINPP1Q9UNW1 487 aa18.2■□□□□ 0.5
HOXD3-202ENST00000410016 CYP2D7A0A087X1C5 515 aa18.2■□□□□ 0.5
HOXD3-202ENST00000410016 ZNF18P17022 549 aa18.2■□□□□ 0.5
HOXD3-202ENST00000410016 DYNLL1P63167 89 aaKnown RBP18.2■□□□□ 0.5
HOXD3-202ENST00000410016 FMR1Q06787 632 aaKnown RBP eCLIP18.2■□□□□ 0.5
HOXD3-202ENST00000410016 EARS2Q5JPH6 523 aaKnown RBP18.2■□□□□ 0.5
HOXD3-202ENST00000410016 MED15Q96RN5 788 aa18.2■□□□□ 0.5
HOXD3-202ENST00000410016 BRIP1Q9BX63 1249 aa18.2■□□□□ 0.5
HOXD3-202ENST00000410016 CSRNP2Q9H175 543 aa18.2■□□□□ 0.5
HOXD3-202ENST00000410016 ZNF652Q9Y2D9 606 aa18.2■□□□□ 0.5
HOXD3-202ENST00000410016 SPDYE4A6NLX3 237 aa18.19■□□□□ 0.5
HOXD3-202ENST00000410016 TROAPQ12815 778 aa18.19■□□□□ 0.5
HOXD3-202ENST00000410016 MLKLQ8NB16 471 aa18.19■□□□□ 0.5
HOXD3-202ENST00000410016 FEZ1Q99689 392 aa18.19■□□□□ 0.5
HOXD3-202ENST00000410016 PHF20Q9BVI0 1012 aa18.19■□□□□ 0.5
HOXD3-202ENST00000410016 CEP131Q9UPN4 1083 aa18.19■□□□□ 0.5
HOXD3-202ENST00000410016 LAMB2P55268 1798 aa18.19■□□□□ 0.5
HOXD3-202ENST00000410016 CACNA1SQ13698 1873 aa18.19■□□□□ 0.5
HOXD3-202ENST00000410016 FAM205CA6NFA0 338 aa18.19■□□□□ 0.5
HOXD3-202ENST00000410016 NRDCO43847 1150 aa18.19■□□□□ 0.5
HOXD3-202ENST00000410016 ADAMTS2O95450 1211 aa18.19■□□□□ 0.5
HOXD3-202ENST00000410016 ATP2B1P20020 1258 aa18.19■□□□□ 0.5
HOXD3-202ENST00000410016 PTPN21Q16825 1174 aa18.19■□□□□ 0.5
HOXD3-202ENST00000410016 CCDC93Q567U6 631 aa18.19■□□□□ 0.5
HOXD3-202ENST00000410016 GRAMD1CQ8IYS0 662 aa18.19■□□□□ 0.5
HOXD3-202ENST00000410016 ENOX1Q8TC92 643 aaKnown RBP18.19■□□□□ 0.5
HOXD3-202ENST00000410016 ERO1AQ96HE7 468 aa18.19■□□□□ 0.5
HOXD3-202ENST00000410016 VPS54Q9P1Q0 977 aa18.19■□□□□ 0.5
HOXD3-202ENST00000410016 CGNQ9P2M7 1197 aaKnown RBP18.19■□□□□ 0.5
HOXD3-202ENST00000410016 CICQ96RK0 1608 aaPredicted RBP18.18■□□□□ 0.5
HOXD3-202ENST00000410016 PRPF3O43395 683 aaKnown RBP18.18■□□□□ 0.5
HOXD3-202ENST00000410016 KCNQ2O43526 872 aa18.18■□□□□ 0.5
HOXD3-202ENST00000410016 SYT10Q6XYQ8 523 aa18.18■□□□□ 0.5
HOXD3-202ENST00000410016 PDILTQ8N807 584 aa18.18■□□□□ 0.5
HOXD3-202ENST00000410016 BCL11BQ9C0K0 894 aaPredicted RBP18.18■□□□□ 0.5
HOXD3-202ENST00000410016 TUBB4AP04350 444 aa18.18■□□□□ 0.5
HOXD3-202ENST00000410016 TBX2Q13207 712 aaPredicted RBP18.18■□□□□ 0.5
HOXD3-202ENST00000410016 CAVIN4Q5BKX8 364 aa18.18■□□□□ 0.5
HOXD3-202ENST00000410016 CTR9Q6PD62 1173 aa18.18■□□□□ 0.5
HOXD3-202ENST00000410016 TMEM139Q8IV31 216 aa18.18■□□□□ 0.5
HOXD3-202ENST00000410016 TRIML1Q8N9V2 468 aa18.18■□□□□ 0.5
HOXD3-202ENST00000410016 SMARCE1Q969G3 411 aa18.18■□□□□ 0.5
HOXD3-202ENST00000410016 V9GY48 417 aaPredicted RBP18.18■□□□□ 0.5
HOXD3-202ENST00000410016 SLU7O95391 586 aaKnown RBP18.17■□□□□ 0.5
HOXD3-202ENST00000410016 PLEKHA8P1O95397 391 aa18.17■□□□□ 0.5
HOXD3-202ENST00000410016 TOP1P11387 765 aaKnown RBP18.17■□□□□ 0.5
HOXD3-202ENST00000410016 ZSCAN20P17040 1043 aaPredicted RBP18.17■□□□□ 0.5
HOXD3-202ENST00000410016 ZNF827Q17R98 1081 aa18.17■□□□□ 0.5
HOXD3-202ENST00000410016 KANK3Q6NY19 840 aa18.17■□□□□ 0.5
HOXD3-202ENST00000410016 FBXO33Q7Z6M2 555 aa18.17■□□□□ 0.5
HOXD3-202ENST00000410016 NOL10Q9BSC4 688 aaKnown RBP18.17■□□□□ 0.5
HOXD3-202ENST00000410016 AATFQ9NY61 560 aaKnown RBP eCLIP18.17■□□□□ 0.5
HOXD3-202ENST00000410016 NFE2L3Q9Y4A8 694 aa18.17■□□□□ 0.5
HOXD3-202ENST00000410016 ROBO1Q9Y6N7 1651 aa18.17■□□□□ 0.5
HOXD3-202ENST00000410016 AHDC1Q5TGY3 1603 aaPredicted RBP18.17■□□□□ 0.5
HOXD3-202ENST00000410016 A0A087X0B3 334 aa18.17■□□□□ 0.5
HOXD3-202ENST00000410016 hCG_1642624A0A1W2PR95 340 aa18.17■□□□□ 0.5
HOXD3-202ENST00000410016 PRDM1O75626 825 aa18.17■□□□□ 0.5
HOXD3-202ENST00000410016 AKAP17AQ02040 695 aaKnown RBP18.17■□□□□ 0.5
HOXD3-202ENST00000410016 GOLGA8FQ08AF8 430 aa18.17■□□□□ 0.5
HOXD3-202ENST00000410016 GOLGA8DPQ0D2H9 430 aa18.17■□□□□ 0.5
HOXD3-202ENST00000410016 NPY5RQ15761 445 aa18.17■□□□□ 0.5
HOXD3-202ENST00000410016 IFIT1BQ5T764 474 aaKnown RBP18.17■□□□□ 0.5
HOXD3-202ENST00000410016 CELF1Q92879 486 aaKnown RBP18.17■□□□□ 0.5
HOXD3-202ENST00000410016 TRIM75PA6NK02 468 aa18.16■□□□□ 0.5
HOXD3-202ENST00000410016 WNT7AO00755 349 aa18.16■□□□□ 0.5
HOXD3-202ENST00000410016 PCP11498 1178 aaKnown RBP18.16■□□□□ 0.5
HOXD3-202ENST00000410016 XBP1P17861 261 aa18.16■□□□□ 0.5
HOXD3-202ENST00000410016 ETF1P62495 437 aaKnown RBP18.16■□□□□ 0.5
HOXD3-202ENST00000410016 HSP90AA4PQ58FG1 418 aa18.16■□□□□ 0.5
HOXD3-202ENST00000410016 TRIM65Q6PJ69 517 aa18.16■□□□□ 0.5
HOXD3-202ENST00000410016 CATIPQ7Z7H3 387 aa18.16■□□□□ 0.5
HOXD3-202ENST00000410016 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.16■□□□□ 0.5
HOXD3-202ENST00000410016 V9GYY5 206 aaPredicted RBP18.16■□□□□ 0.5
HOXD3-202ENST00000410016 SPATA31A5Q5VU36 1347 aa18.16■□□□□ 0.5
HOXD3-202ENST00000410016 SPATA31A7Q8IWB4 1347 aa18.16■□□□□ 0.5
HOXD3-202ENST00000410016 KRT2P35908 639 aa18.16■□□□□ 0.5
HOXD3-202ENST00000410016 EVX2Q03828 476 aa18.16■□□□□ 0.5
HOXD3-202ENST00000410016 SLC10A5Q5PT55 438 aa18.16■□□□□ 0.5
HOXD3-202ENST00000410016 REXO1L1PQ8IX06 675 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 279.3 ms