RNA–Protein interactions for RNA: ENST00000408684.1

SNORD88.1-201, humanhuman

BASIC

Gene SNORD88, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88.1-201ENST00000408684 CALR3Q96L12 384 aaKnown RBP3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 TRERF1Q96PN7 1200 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 NUP88Q99567 741 aaPredicted RBP3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 LARP6Q9BRS8 491 aaKnown RBP3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 ALG1Q9BT22 464 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 METTL22Q9BUU2 404 aaPredicted RBP3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 EDEM3Q9BZQ6 932 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 KRT23Q9C075 422 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 STMN4Q9H169 189 aaPredicted RBP3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 SIL1Q9H173 461 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 TMX4Q9H1E5 349 aaPredicted RBP3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 IL25Q9H293 177 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 CUEDC2Q9H467 287 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 RNF41Q9H4P4 317 aaPredicted RBP3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 BICC1Q9H694 974 aaKnown RBP3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 ANKZF1Q9H8Y5 726 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 CNOT10Q9H9A5 744 aaKnown RBP3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 MAGEF1Q9HAY2 307 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 ZCCHC17Q9NP64 241 aaKnown RBP3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 HOMER3Q9NSC5 361 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 ABHD10Q9NUJ1 306 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 BSDC1Q9NW68 430 aaPredicted RBP3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 PAG1Q9NWQ8 432 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 CHPF2Q9P2E5 772 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 ZRANB1Q9UGI0 708 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 LIMA1Q9UHB6 759 aaKnown RBP3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 PUF60Q9UHX1 559 aaKnown RBP3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 RWDD2AQ9UIY3 292 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 ANGEL1Q9UNK9 670 aaKnown RBP3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 LUC7L2Q9Y383 392 aaKnown RBP3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 PCDHA5Q9Y5H7 936 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 SRPRBQ9Y5M8 271 aaKnown RBP3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 EPN1Q9Y6I3 576 aaPredicted RBP3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 TMEM94Q12767 1356 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 SPEF2Q9C093 1822 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 NALCNQ8IZF0 1738 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 ABCC6O95255 1503 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 CDHR2Q9BYE9 1310 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 SYNRGQ9UMZ2 1314 aa3.19□□□□□ -1.9
SNORD88.1-201ENST00000408684 MED1Q15648 1581 aaPredicted RBP3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 NID2Q14112 1375 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 LOC102724159A0A0B4J2E5 919 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 A0A1W2PQJ5 194 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 GRID2IPA4D2P6 1211 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 CFAP73A6NFT4 308 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 H3BQF6 201 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 EXOC5O00471 708 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 BIN1O00499 593 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 CES2O00748 559 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 TRIM66O15016 1216 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 ZBTB43O43298 467 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 PRC1O43663 620 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 BUB1BO60566 1050 aaPredicted RBP3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 PRPF6O94906 941 aaKnown RBP3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 NDUFA10O95299 355 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 CTDNEP1O95476 244 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 FAM107AO95990 144 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 POLR3DP05423 398 aaPredicted RBP3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 GSTA1P08263 222 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 IFIT1P09914 478 aaKnown RBP3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 RHOXF2BP0C7M4 288 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 HSPD1P10809 573 aaKnown RBP3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 GHRP10912 638 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 IFNAR1P17181 557 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 GNAT2P19087 354 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 HOXC9P31274 260 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 GBP1P32455 592 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 ELF1P32519 619 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 LIFRP42702 1097 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 CCT5P48643 541 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 PSEN1P49768 467 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 MRPL12P52815 198 aaKnown RBP3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 ADKP55263 362 aaKnown RBP3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 EIF3BP55884 814 aaKnown RBP3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 NLRP6P59044 892 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 VSNL1P62760 191 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 GNGT1P63211 74 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 TNNC1P63316 161 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 CCT2P78371 535 aaKnown RBP3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 AMPD3Q01432 767 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 ICA1Q05084 483 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 GCKRQ14397 625 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 SEPT2Q15019 361 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 PWP2Q15269 919 aaKnown RBP3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 ZRSR2Q15696 482 aaKnown RBP3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 CCDC57Q2TAC2 916 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 NBPF20Q3BBV1 942 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 CFAP221Q4G0U5 840 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 CCDC40Q4G0X9 1142 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 PREPLQ4J6C6 727 aaPredicted RBP3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 CCDC122Q5T0U0 273 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 FKBP15Q5T1M5 1219 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 C10orf76Q5T2E6 689 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 RCSD1Q6JBY9 416 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 NBPF10Q6P3W6 841 aaKnown RBP3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 CRELD2Q6UXH1 353 aaPredicted RBP3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 LRIG3Q6UXM1 1119 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 GIGYF2Q6Y7W6 1299 aaKnown RBP3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 KDM7AQ6ZMT4 941 aa3.18□□□□□ -1.9
SNORD88.1-201ENST00000408684 NFXL1Q6ZNB6 911 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms