RNA–Protein interactions for RNA: ENST00000406453.3

SLC29A4-203, Transcript of solute carrier family 29 member 4, humanhuman

TSL 1 (best) BASIC

Gene SLC29A4, Length 2,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC29A4-203ENST00000406453 TMC4Q7Z404 712 aa16.98■□□□□ 0.31
SLC29A4-203ENST00000406453 FAM205AQ6ZU69 1335 aa16.97■□□□□ 0.31
SLC29A4-203ENST00000406453 ME1P48163 572 aa16.97■□□□□ 0.31
SLC29A4-203ENST00000406453 PDE4BQ07343 736 aa16.97■□□□□ 0.31
SLC29A4-203ENST00000406453 TMTC2Q8N394 836 aa16.97■□□□□ 0.31
SLC29A4-203ENST00000406453 TTF2Q9UNY4 1162 aaKnown RBP16.97■□□□□ 0.31
SLC29A4-203ENST00000406453 FLT1P17948 1338 aa16.97■□□□□ 0.31
SLC29A4-203ENST00000406453 G3V3G9 751 aa16.97■□□□□ 0.31
SLC29A4-203ENST00000406453 ZBTB22O15209 634 aa16.97■□□□□ 0.31
SLC29A4-203ENST00000406453 VEGFAP15692 232 aaPredicted RBP16.97■□□□□ 0.31
SLC29A4-203ENST00000406453 DCAF8Q5TAQ9 597 aa16.97■□□□□ 0.31
SLC29A4-203ENST00000406453 BTBD18B2RXH4 712 aa16.96■□□□□ 0.31
SLC29A4-203ENST00000406453 CATIPQ7Z7H3 387 aa16.96■□□□□ 0.31
SLC29A4-203ENST00000406453 ZNF396Q96N95 335 aaPredicted RBP16.96■□□□□ 0.31
SLC29A4-203ENST00000406453 MKNK2Q9HBH9 465 aa16.96■□□□□ 0.31
SLC29A4-203ENST00000406453 PCDHA7Q9UN72 937 aa16.96■□□□□ 0.31
SLC29A4-203ENST00000406453 SCN9AQ15858 1988 aa16.96■□□□□ 0.31
SLC29A4-203ENST00000406453 CCAR1Q8IX12 1150 aaKnown RBP16.96■□□□□ 0.3
SLC29A4-203ENST00000406453 OXER1Q8TDS5 423 aa16.96■□□□□ 0.3
SLC29A4-203ENST00000406453 NID2Q14112 1375 aa16.96■□□□□ 0.3
SLC29A4-203ENST00000406453 SLC3A2P08195 630 aaKnown RBP16.95■□□□□ 0.3
SLC29A4-203ENST00000406453 FUT2Q10981 343 aa16.95■□□□□ 0.3
SLC29A4-203ENST00000406453 NR5A1Q13285 461 aa16.95■□□□□ 0.3
SLC29A4-203ENST00000406453 TBC1D22AQ8WUA7 517 aa16.95■□□□□ 0.3
SLC29A4-203ENST00000406453 ERCC4Q92889 916 aaPredicted RBP16.95■□□□□ 0.3
SLC29A4-203ENST00000406453 DDX4Q9NQI0 724 aaKnown RBP16.95■□□□□ 0.3
SLC29A4-203ENST00000406453 V9GY48 417 aaPredicted RBP16.95■□□□□ 0.3
SLC29A4-203ENST00000406453 MYH6P13533 1939 aa16.95■□□□□ 0.3
SLC29A4-203ENST00000406453 A0A087WWV3 80 aa16.95■□□□□ 0.3
SLC29A4-203ENST00000406453 HMGB2P26583 209 aaKnown RBP16.95■□□□□ 0.3
SLC29A4-203ENST00000406453 MARCKSP29966 332 aaPredicted RBP16.95■□□□□ 0.3
SLC29A4-203ENST00000406453 GNL2Q13823 731 aaKnown RBP16.95■□□□□ 0.3
SLC29A4-203ENST00000406453 LINC00301Q8NCQ3 95 aa16.95■□□□□ 0.3
SLC29A4-203ENST00000406453 NUP62CLQ9H1M0 184 aa16.95■□□□□ 0.3
SLC29A4-203ENST00000406453 VPS54Q9P1Q0 977 aa16.95■□□□□ 0.3
SLC29A4-203ENST00000406453 GAKO14976 1311 aa16.95■□□□□ 0.3
SLC29A4-203ENST00000406453 CACNB3P54284 484 aa16.94■□□□□ 0.3
SLC29A4-203ENST00000406453 PKN1Q16512 942 aa16.94■□□□□ 0.3
SLC29A4-203ENST00000406453 AOC3Q16853 763 aa16.94■□□□□ 0.3
SLC29A4-203ENST00000406453 KIAA0825Q8IV33 1275 aa16.94■□□□□ 0.3
SLC29A4-203ENST00000406453 MTA3Q9BTC8 594 aa16.94■□□□□ 0.3
SLC29A4-203ENST00000406453 RTEL1Q9NZ71 1219 aa16.94■□□□□ 0.3
SLC29A4-203ENST00000406453 RGPD3A6NKT7 1758 aaPredicted RBP16.94■□□□□ 0.3
SLC29A4-203ENST00000406453 RGPD4Q7Z3J3 1758 aa16.94■□□□□ 0.3
SLC29A4-203ENST00000406453 DLEC1Q9Y238 1755 aa16.94■□□□□ 0.3
SLC29A4-203ENST00000406453 C21orf2O43822 256 aa16.94■□□□□ 0.3
SLC29A4-203ENST00000406453 RASA1P20936 1047 aa16.94■□□□□ 0.3
SLC29A4-203ENST00000406453 TRIM22Q8IYM9 498 aa16.94■□□□□ 0.3
SLC29A4-203ENST00000406453 SRBD1Q8N5C6 995 aaKnown RBP16.94■□□□□ 0.3
SLC29A4-203ENST00000406453 FUCA2Q9BTY2 467 aa16.94■□□□□ 0.3
SLC29A4-203ENST00000406453 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.94■□□□□ 0.3
SLC29A4-203ENST00000406453 TMX4Q9H1E5 349 aaPredicted RBP16.94■□□□□ 0.3
SLC29A4-203ENST00000406453 DDX60LQ5H9U9 1706 aaKnown RBP16.94■□□□□ 0.3
SLC29A4-203ENST00000406453 STK36Q9NRP7 1315 aa16.93■□□□□ 0.3
SLC29A4-203ENST00000406453 MYH1P12882 1939 aa16.93■□□□□ 0.3
SLC29A4-203ENST00000406453 A0A1B0GVL5 298 aa16.93■□□□□ 0.3
SLC29A4-203ENST00000406453 FAM205CA6NFA0 338 aa16.93■□□□□ 0.3
SLC29A4-203ENST00000406453 TRIM29Q14134 588 aa16.93■□□□□ 0.3
SLC29A4-203ENST00000406453 STK38Q15208 465 aa16.93■□□□□ 0.3
SLC29A4-203ENST00000406453 ADAMTS3O15072 1205 aa16.93■□□□□ 0.3
SLC29A4-203ENST00000406453 SF3A1Q15459 793 aaKnown RBP16.93■□□□□ 0.3
SLC29A4-203ENST00000406453 DIS3L2Q8IYB7 885 aaKnown RBP16.93■□□□□ 0.3
SLC29A4-203ENST00000406453 STAG2Q8N3U4 1231 aa16.93■□□□□ 0.3
SLC29A4-203ENST00000406453 TSPY3P0CV98 308 aa16.92■□□□□ 0.3
SLC29A4-203ENST00000406453 TSPY8P0CW00 308 aa16.92■□□□□ 0.3
SLC29A4-203ENST00000406453 PCP11498 1178 aaKnown RBP16.92■□□□□ 0.3
SLC29A4-203ENST00000406453 CDK8P49336 464 aa16.92■□□□□ 0.3
SLC29A4-203ENST00000406453 NOM1Q5C9Z4 860 aaKnown RBP16.92■□□□□ 0.3
SLC29A4-203ENST00000406453 BRAPQ7Z569 592 aa16.92■□□□□ 0.3
SLC29A4-203ENST00000406453 FAM163AQ96GL9 167 aaPredicted RBP16.92■□□□□ 0.3
SLC29A4-203ENST00000406453 TNMDQ9H2S6 317 aa16.92■□□□□ 0.3
SLC29A4-203ENST00000406453 CPVLQ9H3G5 476 aa16.92■□□□□ 0.3
SLC29A4-203ENST00000406453 STX8Q9UNK0 236 aa16.92■□□□□ 0.3
SLC29A4-203ENST00000406453 CCDC196A0A1B0GTZ2 297 aa16.92■□□□□ 0.3
SLC29A4-203ENST00000406453 WDHD1O75717 1129 aaPredicted RBP16.92■□□□□ 0.3
SLC29A4-203ENST00000406453 DEXIO95424 95 aa16.92■□□□□ 0.3
SLC29A4-203ENST00000406453 MMP1P03956 469 aa16.92■□□□□ 0.3
SLC29A4-203ENST00000406453 ATP2B1P20020 1258 aa16.92■□□□□ 0.3
SLC29A4-203ENST00000406453 SNW1Q13573 536 aaKnown RBP16.92■□□□□ 0.3
SLC29A4-203ENST00000406453 ANO1Q5XXA6 986 aa16.92■□□□□ 0.3
SLC29A4-203ENST00000406453 STYK1Q6J9G0 422 aa16.92■□□□□ 0.3
SLC29A4-203ENST00000406453 CLEC10AQ8IUN9 316 aa16.92■□□□□ 0.3
SLC29A4-203ENST00000406453 FSIP1Q8NA03 581 aa16.92■□□□□ 0.3
SLC29A4-203ENST00000406453 C7orf43Q8WVR3 580 aa16.92■□□□□ 0.3
SLC29A4-203ENST00000406453 ECE2O60344 883 aa16.91■□□□□ 0.3
SLC29A4-203ENST00000406453 NFIAQ12857 509 aa16.91■□□□□ 0.3
SLC29A4-203ENST00000406453 ZFPM1Q8IX07 1006 aa16.91■□□□□ 0.3
SLC29A4-203ENST00000406453 ROBO3Q96MS0 1386 aa16.91■□□□□ 0.3
SLC29A4-203ENST00000406453 SPTLC2O15270 562 aa16.91■□□□□ 0.3
SLC29A4-203ENST00000406453 U2AF2P26368 475 aaKnown RBP eCLIP16.91■□□□□ 0.3
SLC29A4-203ENST00000406453 EARS2Q5JPH6 523 aaKnown RBP16.91■□□□□ 0.3
SLC29A4-203ENST00000406453 TMTC3Q6ZXV5 915 aa16.91■□□□□ 0.3
SLC29A4-203ENST00000406453 ZNF444Q8N0Y2 327 aaPredicted RBP16.91■□□□□ 0.3
SLC29A4-203ENST00000406453 USP40Q9NVE5 1235 aa16.91■□□□□ 0.3
SLC29A4-203ENST00000406453 POLR3EQ9NVU0 708 aa16.91■□□□□ 0.3
SLC29A4-203ENST00000406453 SNED1Q8TER0 1413 aa16.91■□□□□ 0.3
SLC29A4-203ENST00000406453 TOB1P50616 345 aaPredicted RBP16.9■□□□□ 0.3
SLC29A4-203ENST00000406453 TMED8Q6PL24 325 aaPredicted RBP16.9■□□□□ 0.3
SLC29A4-203ENST00000406453 AMOTL1Q8IY63 956 aa16.9■□□□□ 0.3
SLC29A4-203ENST00000406453 PNMA1Q8ND90 353 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms