RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 HSP90AA2PQ14568 343 aaPredicted RBP17.78■□□□□ 0.44
CPSF7-202ENST00000394888 GRIK5Q16478 980 aa17.78■□□□□ 0.44
CPSF7-202ENST00000394888 KRBA2Q6ZNG9 492 aa17.78■□□□□ 0.44
CPSF7-202ENST00000394888 NUTM2AQ8IVF1 878 aaPredicted RBP17.78■□□□□ 0.44
CPSF7-202ENST00000394888 PDCL3Q9H2J4 239 aa17.78■□□□□ 0.44
CPSF7-202ENST00000394888 GOLGA6L6A8MZA4 724 aa17.78■□□□□ 0.44
CPSF7-202ENST00000394888 IKBKBO14920 756 aa17.78■□□□□ 0.44
CPSF7-202ENST00000394888 CUTAO60888 179 aa17.78■□□□□ 0.44
CPSF7-202ENST00000394888 CNTNAP5Q8WYK1 1306 aa17.77■□□□□ 0.44
CPSF7-202ENST00000394888 RC3H1Q5TC82 1133 aaKnown RBP17.77■□□□□ 0.44
CPSF7-202ENST00000394888 ISM2Q6H9L7 571 aa17.77■□□□□ 0.44
CPSF7-202ENST00000394888 PRDX5P30044 214 aa17.77■□□□□ 0.44
CPSF7-202ENST00000394888 SYKP43405 635 aa17.77■□□□□ 0.44
CPSF7-202ENST00000394888 E4F1Q66K89 784 aaPredicted RBP17.77■□□□□ 0.44
CPSF7-202ENST00000394888 NFXL1Q6ZNB6 911 aa17.77■□□□□ 0.44
CPSF7-202ENST00000394888 CCDC69A6NI79 296 aa17.77■□□□□ 0.43
CPSF7-202ENST00000394888 RRP12Q5JTH9 1297 aaKnown RBP17.77■□□□□ 0.43
CPSF7-202ENST00000394888 SYNE3Q6ZMZ3 975 aa17.77■□□□□ 0.43
CPSF7-202ENST00000394888 TMEM139Q8IV31 216 aa17.77■□□□□ 0.43
CPSF7-202ENST00000394888 CCDC24Q8N4L8 307 aa17.77■□□□□ 0.43
CPSF7-202ENST00000394888 ZSCAN10Q96SZ4 725 aaPredicted RBP17.77■□□□□ 0.43
CPSF7-202ENST00000394888 SDF4Q9BRK5 362 aa17.77■□□□□ 0.43
CPSF7-202ENST00000394888 TMX1Q9H3N1 280 aa17.76■□□□□ 0.43
CPSF7-202ENST00000394888 NRXN2Q9P2S2 1712 aa17.76■□□□□ 0.43
CPSF7-202ENST00000394888 CYP2D6P10635 497 aa17.76■□□□□ 0.43
CPSF7-202ENST00000394888 FNBP4Q8N3X1 1017 aaPredicted RBP17.76■□□□□ 0.43
CPSF7-202ENST00000394888 DCP1AQ9NPI6 582 aaPredicted RBP17.76■□□□□ 0.43
CPSF7-202ENST00000394888 DEXIO95424 95 aa17.76■□□□□ 0.43
CPSF7-202ENST00000394888 GREB1LQ9C091 1923 aaPredicted RBP17.76■□□□□ 0.43
CPSF7-202ENST00000394888 RPS6KA4O75676 772 aa17.75■□□□□ 0.43
CPSF7-202ENST00000394888 FMR1Q06787 632 aaKnown RBP eCLIP17.75■□□□□ 0.43
CPSF7-202ENST00000394888 APTXQ7Z2E3 356 aaKnown RBP17.75■□□□□ 0.43
CPSF7-202ENST00000394888 RNF26Q9BY78 433 aaPredicted RBP17.75■□□□□ 0.43
CPSF7-202ENST00000394888 KCNH3Q9ULD8 1083 aa17.75■□□□□ 0.43
CPSF7-202ENST00000394888 ZNF652Q9Y2D9 606 aa17.75■□□□□ 0.43
CPSF7-202ENST00000394888 PCDHA5Q9Y5H7 936 aa17.75■□□□□ 0.43
CPSF7-202ENST00000394888 PRDM1O75626 825 aa17.75■□□□□ 0.43
CPSF7-202ENST00000394888 IL17AQ16552 155 aa17.75■□□□□ 0.43
CPSF7-202ENST00000394888 CCDC82Q8N4S0 544 aa17.75■□□□□ 0.43
CPSF7-202ENST00000394888 IFNKQ9P0W0 207 aa17.75■□□□□ 0.43
CPSF7-202ENST00000394888 ABCF2Q9UG63 623 aa17.75■□□□□ 0.43
CPSF7-202ENST00000394888 hCG_1642624A0A1W2PR95 340 aa17.75■□□□□ 0.43
CPSF7-202ENST00000394888 GRAMD1CQ8IYS0 662 aa17.75■□□□□ 0.43
CPSF7-202ENST00000394888 SRBD1Q8N5C6 995 aaKnown RBP17.75■□□□□ 0.43
CPSF7-202ENST00000394888 C16orf45Q96MC5 204 aaPredicted RBP17.75■□□□□ 0.43
CPSF7-202ENST00000394888 FAM13BQ9NYF5 915 aa17.75■□□□□ 0.43
CPSF7-202ENST00000394888 ROBO3Q96MS0 1386 aa17.75■□□□□ 0.43
CPSF7-202ENST00000394888 ZNF18P17022 549 aa17.74■□□□□ 0.43
CPSF7-202ENST00000394888 SH3RF1Q7Z6J0 888 aa17.74■□□□□ 0.43
CPSF7-202ENST00000394888 GOLGA6L19H0YKK7 550 aa17.74■□□□□ 0.43
CPSF7-202ENST00000394888 ZNF579Q8NAF0 562 aaKnown RBP17.74■□□□□ 0.43
CPSF7-202ENST00000394888 TFCP2L1Q9NZI6 479 aa17.74■□□□□ 0.43
CPSF7-202ENST00000394888 SRPRBQ9Y5M8 271 aaKnown RBP17.74■□□□□ 0.43
CPSF7-202ENST00000394888 SIPA1L1O43166 1804 aa17.74■□□□□ 0.43
CPSF7-202ENST00000394888 TMEM232C9JQI7 657 aa17.74■□□□□ 0.43
CPSF7-202ENST00000394888 ORC4O43929 436 aa17.74■□□□□ 0.43
CPSF7-202ENST00000394888 KRI1Q8N9T8 703 aaKnown RBP17.74■□□□□ 0.43
CPSF7-202ENST00000394888 NACAP1Q9BZK3 213 aa17.74■□□□□ 0.43
CPSF7-202ENST00000394888 IL17RBQ9NRM6 502 aa17.74■□□□□ 0.43
CPSF7-202ENST00000394888 MAN1B1Q9UKM7 699 aa17.74■□□□□ 0.43
CPSF7-202ENST00000394888 FAM182BQ5T319 152 aa17.73■□□□□ 0.43
CPSF7-202ENST00000394888 BICDL1Q6ZP65 573 aa17.73■□□□□ 0.43
CPSF7-202ENST00000394888 VPS54Q9P1Q0 977 aa17.73■□□□□ 0.43
CPSF7-202ENST00000394888 SNED1Q8TER0 1413 aa17.73■□□□□ 0.43
CPSF7-202ENST00000394888 MINDY4BA8MYZ0 360 aa17.73■□□□□ 0.43
CPSF7-202ENST00000394888 PRPF3O43395 683 aaKnown RBP17.73■□□□□ 0.43
CPSF7-202ENST00000394888 MORC3Q14149 939 aa17.73■□□□□ 0.43
CPSF7-202ENST00000394888 NAA30Q147X3 362 aaPredicted RBP17.73■□□□□ 0.43
CPSF7-202ENST00000394888 PTPN21Q16825 1174 aa17.73■□□□□ 0.43
CPSF7-202ENST00000394888 CCAR2Q8N163 923 aaKnown RBP17.73■□□□□ 0.43
CPSF7-202ENST00000394888 M0R2N6 131 aa17.73■□□□□ 0.43
CPSF7-202ENST00000394888 ARHGEF1Q92888 912 aaKnown RBP17.73■□□□□ 0.43
CPSF7-202ENST00000394888 RAI14Q9P0K7 980 aa17.73■□□□□ 0.43
CPSF7-202ENST00000394888 COL11A2P13942 1736 aaPredicted RBP17.72■□□□□ 0.43
CPSF7-202ENST00000394888 SEMA3EO15041 775 aa17.72■□□□□ 0.43
CPSF7-202ENST00000394888 RPS8P62241 208 aaKnown RBP17.72■□□□□ 0.43
CPSF7-202ENST00000394888 NCBP1Q09161 790 aaKnown RBP17.72■□□□□ 0.43
CPSF7-202ENST00000394888 TMTC3Q6ZXV5 915 aa17.72■□□□□ 0.43
CPSF7-202ENST00000394888 CSRNP2Q9H175 543 aa17.72■□□□□ 0.43
CPSF7-202ENST00000394888 IMPACTQ9P2X3 320 aa17.72■□□□□ 0.43
CPSF7-202ENST00000394888 USP17L12C9JPN9 530 aa17.72■□□□□ 0.43
CPSF7-202ENST00000394888 USP17L21D6R901 530 aa17.72■□□□□ 0.43
CPSF7-202ENST00000394888 SKILP12757 684 aa17.72■□□□□ 0.43
CPSF7-202ENST00000394888 TBX2Q13207 712 aaPredicted RBP17.72■□□□□ 0.43
CPSF7-202ENST00000394888 RNF41Q9H4P4 317 aaPredicted RBP17.71■□□□□ 0.43
CPSF7-202ENST00000394888 FANCCQ00597 558 aa17.71■□□□□ 0.43
CPSF7-202ENST00000394888 SBK1Q52WX2 424 aa17.71■□□□□ 0.43
CPSF7-202ENST00000394888 MTRQ99707 1265 aa17.71■□□□□ 0.43
CPSF7-202ENST00000394888 LMOD1P29536 600 aaPredicted RBP17.71■□□□□ 0.43
CPSF7-202ENST00000394888 DRC7Q8IY82 874 aa17.71■□□□□ 0.43
CPSF7-202ENST00000394888 TMTC2Q8N394 836 aa17.71■□□□□ 0.43
CPSF7-202ENST00000394888 ESR2Q92731 530 aa17.71■□□□□ 0.43
CPSF7-202ENST00000394888 SERTAD1Q9UHV2 236 aa17.71■□□□□ 0.43
CPSF7-202ENST00000394888 FILIP1Q7Z7B0 1213 aa17.7■□□□□ 0.42
CPSF7-202ENST00000394888 LRRC4BQ9NT99 713 aa17.7■□□□□ 0.42
CPSF7-202ENST00000394888 AATFQ9NY61 560 aaKnown RBP eCLIP17.7■□□□□ 0.42
CPSF7-202ENST00000394888 MYH8P13535 1937 aa17.7■□□□□ 0.42
CPSF7-202ENST00000394888 A0A0G2JS52 829 aa17.7■□□□□ 0.42
CPSF7-202ENST00000394888 RILPL1Q5EBL4 403 aa17.7■□□□□ 0.42
CPSF7-202ENST00000394888 NAT10Q9H0A0 1025 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms